FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3767, 755 aa 1>>>pF1KE3767 755 - 755 aa - 755 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3896+/-0.00053; mu= 14.5188+/- 0.033 mean_var=89.4413+/-18.133, 0's: 0 Z-trim(108.5): 39 B-trim: 1188 in 2/51 Lambda= 0.135614 statistics sampled from 16556 (16580) to 16556 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.539), E-opt: 0.2 (0.194), width: 16 Scan time: 12.260 The best scores are: opt bits E(85289) NP_057321 (OMIM: 606948) anaphase-promoting comple ( 755) 4867 963.4 0 NP_001317418 (OMIM: 606948) anaphase-promoting com ( 742) 2421 484.9 5.3e-136 NP_001131031 (OMIM: 606948) anaphase-promoting com ( 643) 2369 474.7 5.4e-133 XP_016874913 (OMIM: 606948) PREDICTED: anaphase-pr ( 357) 2302 461.4 2.9e-129 XP_016874912 (OMIM: 606948) PREDICTED: anaphase-pr ( 357) 2302 461.4 2.9e-129 >>NP_057321 (OMIM: 606948) anaphase-promoting complex su (755 aa) initn: 4867 init1: 4867 opt: 4867 Z-score: 5148.9 bits: 963.4 E(85289): 0 Smith-Waterman score: 4867; 100.0% identity (100.0% similar) in 755 aa overlap (1-755:1-755) 10 20 30 40 50 60 pF1KE3 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 670 680 690 700 710 720 730 740 750 pF1KE3 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL ::::::::::::::::::::::::::::::::::: NP_057 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 730 740 750 >>NP_001317418 (OMIM: 606948) anaphase-promoting complex (742 aa) initn: 4776 init1: 2421 opt: 2421 Z-score: 2562.7 bits: 484.9 E(85289): 5.3e-136 Smith-Waterman score: 4754; 98.3% identity (98.3% similar) in 755 aa overlap (1-755:1-742) 10 20 30 40 50 60 pF1KE3 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MASVHESLYFNPMMTNGVVHANVFGIKDWVTPYKIAVLVLLNEMSRTGEGAVSLMERRRL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NQLLLPLLQGPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GTEPEVHKTSVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DEGERKMEKEELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKEL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NNLLKFNPDFAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 LEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDI :::::::::::::: ::::::::::::::::::::::::::::::::: NP_001 LEHSVKKAVHFGLP-------------RAFAGKTANKLMDALKDSDLLHWKHSLSELIDI 370 380 390 400 430 440 450 460 470 480 pF1KE3 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SIAQKTAIWRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQ 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE3 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GCFAAASEVLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNS 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE3 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IEGVYRKAVVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIA 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE3 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPMLLQALALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDK 590 600 610 620 630 640 670 680 690 700 710 720 pF1KE3 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GRAMFLVAKCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARL 650 660 670 680 690 700 730 740 750 pF1KE3 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL ::::::::::::::::::::::::::::::::::: NP_001 YHTLGKTQERNRCAMLFRQLHQELPSHGVPLINHL 710 720 730 740 >>NP_001131031 (OMIM: 606948) anaphase-promoting complex (643 aa) initn: 4141 init1: 2369 opt: 2369 Z-score: 2508.7 bits: 474.7 E(85289): 5.4e-133 Smith-Waterman score: 4119; 98.0% identity (98.0% similar) in 656 aa overlap (100-755:1-643) 70 80 90 100 110 120 pF1KE3 GPDITLSKLYKLIEESCPQLANSVQIRIKLMAEGELKDMEQFFDDLSDSFSGTEPEVHKT :::::::::::::::::::::::::::::: NP_001 MAEGELKDMEQFFDDLSDSFSGTEPEVHKT 10 20 30 130 140 150 160 170 180 pF1KE3 SVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SVVGLFLRHMILAYSKLSFSQVFKLYTALQQYFQNGEKKTVEDADMELTSRDEGERKMEK 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE3 EELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLKFNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EELDVSVREEEVSCSGPLSQKQAEFFLSQQASLLKNDETKALTPASLQKELNNLLKFNPD 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE3 FAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FAEAHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESKSNGEEGYGRSLRYAALNLAA 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE3 LHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LHCRFGHYQQAELALQEAIRIAQESNDHVCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAV 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE3 HFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIW ::::: :::::::::::::::::::::::::::::::::::::::::: NP_001 HFGLP-------------RAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAIW 280 290 300 310 430 440 450 460 470 480 pF1KE3 RLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASEV 320 330 340 350 360 370 490 500 510 520 530 540 pF1KE3 LKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKAV 380 390 400 410 420 430 550 560 570 580 590 600 pF1KE3 VLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQALA 440 450 460 470 480 490 610 620 630 640 650 660 pF1KE3 LSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVAK 500 510 520 530 540 550 670 680 690 700 710 720 pF1KE3 CQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQE 560 570 580 590 600 610 730 740 750 pF1KE3 RNRCAMLFRQLHQELPSHGVPLINHL :::::::::::::::::::::::::: NP_001 RNRCAMLFRQLHQELPSHGVPLINHL 620 630 640 >>XP_016874913 (OMIM: 606948) PREDICTED: anaphase-promot (357 aa) initn: 2302 init1: 2302 opt: 2302 Z-score: 2441.8 bits: 461.4 E(85289): 2.9e-129 Smith-Waterman score: 2302; 100.0% identity (100.0% similar) in 357 aa overlap (399-755:1-357) 370 380 390 400 410 420 pF1KE3 VHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAI :::::::::::::::::::::::::::::: XP_016 MDALKDSDLLHWKHSLSELIDISIAQKTAI 10 20 30 430 440 450 460 470 480 pF1KE3 WRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASE 40 50 60 70 80 90 490 500 510 520 530 540 pF1KE3 VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKA 100 110 120 130 140 150 550 560 570 580 590 600 pF1KE3 VVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQAL 160 170 180 190 200 210 610 620 630 640 650 660 pF1KE3 ALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVA 220 230 240 250 260 270 670 680 690 700 710 720 pF1KE3 KCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQ 280 290 300 310 320 330 730 740 750 pF1KE3 ERNRCAMLFRQLHQELPSHGVPLINHL ::::::::::::::::::::::::::: XP_016 ERNRCAMLFRQLHQELPSHGVPLINHL 340 350 >>XP_016874912 (OMIM: 606948) PREDICTED: anaphase-promot (357 aa) initn: 2302 init1: 2302 opt: 2302 Z-score: 2441.8 bits: 461.4 E(85289): 2.9e-129 Smith-Waterman score: 2302; 100.0% identity (100.0% similar) in 357 aa overlap (399-755:1-357) 370 380 390 400 410 420 pF1KE3 VHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHSLSELIDISIAQKTAI :::::::::::::::::::::::::::::: XP_016 MDALKDSDLLHWKHSLSELIDISIAQKTAI 10 20 30 430 440 450 460 470 480 pF1KE3 WRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 WRLYGRSTMALQQAQMLLSMNSLEAVNAGVQQNNTESFAVALCHLAELHAEQGCFAAASE 40 50 60 70 80 90 490 500 510 520 530 540 pF1KE3 VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VLKHLKERFPPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGITALNSIEGVYRKA 100 110 120 130 140 150 550 560 570 580 590 600 pF1KE3 VVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VVLQAQNQMSEAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRSSSPTIALPMLLQAL 160 170 180 190 200 210 610 620 630 640 650 660 pF1KE3 ALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ALSKEYRLQYLASETVLNLAFAQLILGIPEQALSLLHMAIEPILADGAILDKGRAMFLVA 220 230 240 250 260 270 670 680 690 700 710 720 pF1KE3 KCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KCQVASAASYDQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQ 280 290 300 310 320 330 730 740 750 pF1KE3 ERNRCAMLFRQLHQELPSHGVPLINHL ::::::::::::::::::::::::::: XP_016 ERNRCAMLFRQLHQELPSHGVPLINHL 340 350 755 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 07:07:15 2016 done: Sun Nov 6 07:07:17 2016 Total Scan time: 12.260 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]