Result of FASTA (omim) for
pFN21AE0439
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE0439, 314 aa
1>>>pF1KE0439 314 - 314 aa - 314 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3512+/-0.000423; mu= 15.1809+/- 0.026
mean_var=64.9604+/-12.835, 0's: 0 Z-trim(110.3): 23 B-trim: 0 in 0/54
Lambda= 0.159129
statistics sampled from 18641 (18657) to 18641 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.219), width: 16
Scan time: 6.480
The best scores are: opt bits E(85289)
NP_005318 (OMIM: 231530,601609,609975) hydroxyacyl ( 314) 1986 465.0 8.8e-131
NP_001317956 (OMIM: 231530,601609,609975) hydroxya ( 318) 1729 406.0 5.1e-113
NP_001171634 (OMIM: 231530,601609,609975) hydroxya ( 331) 1451 342.2 8.7e-94
NP_000173 (OMIM: 600890,609015,609016) trifunction ( 763) 548 135.1 4.5e-31
XP_006713588 (OMIM: 607037,615605) PREDICTED: pero ( 515) 441 110.4 8e-24
XP_016861328 (OMIM: 607037,615605) PREDICTED: pero ( 515) 441 110.4 8e-24
XP_011510819 (OMIM: 607037,615605) PREDICTED: pero ( 627) 441 110.5 9.4e-24
NP_001159887 (OMIM: 607037,615605) peroxisomal bif ( 627) 441 110.5 9.4e-24
NP_001957 (OMIM: 607037,615605) peroxisomal bifunc ( 723) 441 110.5 1.1e-23
NP_057058 (OMIM: 609877) lambda-crystallin homolog ( 319) 307 79.5 9.7e-15
XP_005266473 (OMIM: 609877) PREDICTED: lambda-crys ( 217) 255 67.5 2.7e-11
XP_016876113 (OMIM: 609877) PREDICTED: lambda-crys ( 234) 234 62.7 8.2e-10
XP_005266472 (OMIM: 609877) PREDICTED: lambda-crys ( 265) 184 51.3 2.6e-06
>>NP_005318 (OMIM: 231530,601609,609975) hydroxyacyl-coe (314 aa)
initn: 1986 init1: 1986 opt: 1986 Z-score: 2468.9 bits: 465.0 E(85289): 8.8e-131
Smith-Waterman score: 1986; 100.0% identity (100.0% similar) in 314 aa overlap (1-314:1-314)
10 20 30 40 50 60
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKL
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE0 VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDAS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDAS
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE0 KEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAEN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAEN
250 260 270 280 290 300
310
pF1KE0 KFGKKTGEGFYKYK
::::::::::::::
NP_005 KFGKKTGEGFYKYK
310
>>NP_001317956 (OMIM: 231530,601609,609975) hydroxyacyl- (318 aa)
initn: 1729 init1: 1729 opt: 1729 Z-score: 2150.0 bits: 406.0 E(85289): 5.1e-113
Smith-Waterman score: 1729; 98.5% identity (99.3% similar) in 275 aa overlap (40-314:44-318)
10 20 30 40 50 60
pF1KE0 RSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG
: . .:::::::::::::::::::::::::
NP_001 LGVCWRKEHDPAEMLRVGRAELGGWKPSWEAIVKEVAAATGHTVVLVDQTEDILAKSKKG
20 30 40 50 60 70
70 80 90 100 110 120
pF1KE0 IEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNE
80 90 100 110 120 130
130 140 150 160 170 180
pF1KE0 LFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMT
140 150 160 170 180 190
190 200 210 220 230 240
pF1KE0 SQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMK
200 210 220 230 240 250
250 260 270 280 290 300
pF1KE0 LGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEG
260 270 280 290 300 310
310
pF1KE0 FYKYK
:::::
NP_001 FYKYK
>>NP_001171634 (OMIM: 231530,601609,609975) hydroxyacyl- (331 aa)
initn: 1450 init1: 1450 opt: 1451 Z-score: 1804.8 bits: 342.2 E(85289): 8.7e-94
Smith-Waterman score: 1942; 94.9% identity (94.9% similar) in 331 aa overlap (1-314:1-331)
10 20 30 40 50 60
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE0 DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAI
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE0 VENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKL
130 140 150 160 170 180
190 200 210 220 230
pF1KE0 VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYER----
::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERDFQT
190 200 210 220 230 240
240 250 260 270 280
pF1KE0 -------------GDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAE
:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CGDSNSGLGFSLKGDASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAE
250 260 270 280 290 300
290 300 310
pF1KE0 NPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
:::::::::::::::::::::::::::::::
NP_001 NPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
310 320 330
>>NP_000173 (OMIM: 600890,609015,609016) trifunctional e (763 aa)
initn: 380 init1: 252 opt: 548 Z-score: 678.9 bits: 135.1 E(85289): 4.5e-31
Smith-Waterman score: 548; 34.1% identity (66.2% similar) in 290 aa overlap (27-314:361-640)
10 20 30 40 50
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLV
:::....:.::::::::::.. : ..:
NP_000 VMTKESKALMGLYHGQVLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILK
340 350 360 370 380 390
60 70 80 90 100 110
pF1KE0 DQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLV
: : : .... . ..: .::: : : . .. . :. . ...:.:
NP_000 DATLTALDRGQQQVFKGLNDKVKKK------ALTSFERDSIFSNLTGQLDYQGFEKADMV
400 410 420 430 440
120 130 140 150 160 170
pF1KE0 VEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVP
.::. :.:..:....:... .: :::::::.: :. :: .. : .. :.:.:.::
NP_000 IEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVD
450 460 470 480 490 500
180 190 200 210 220 230
pF1KE0 VMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYER
:.:.:.: : ::. : : : . :: . :: ::: ..: :.:.. :.::. ..
NP_000 KMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQE
510 520 530 540 550 560
240 250 260 270 280 290
pF1KE0 G-DASKEDIDTAMKLGAGYPMGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSL-N
: : .: : .. . :.:.: :.: ::.:..: ... .. .: . .: : .
NP_000 GVDPKKLD---SLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGER-FGGGNPELLT
570 580 590 600 610 620
300 310
pF1KE0 KLVAENKFGKKTGEGFYKYK
..:... .:.:.:.::: :.
NP_000 QMVSKGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTR
630 640 650 660 670 680
>>XP_006713588 (OMIM: 607037,615605) PREDICTED: peroxiso (515 aa)
initn: 468 init1: 286 opt: 441 Z-score: 548.7 bits: 110.4 E(85289): 8e-24
Smith-Waterman score: 455; 31.9% identity (60.1% similar) in 313 aa overlap (13-313:77-374)
10 20 30 40
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
:..: .:::. :. : :.: : :: ::
XP_006 LFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARP--VSSVGVVGLGTMGRGI
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE0 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKK-KFAENPKAGDEFVEKTLSTIA
. : . :. ::. .. :: ..: : :.: :.: . . .: .: . . :..
XP_006 VISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPK--PRLTSSVK
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE0 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATT
. ..:::.::. :....:...: .:. .... .:::.:.. ::..:
XP_006 E-------LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTD
170 180 190 200 210
170 180 190 200 210 220
pF1KE0 RQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNR
: : :::.:. ::::.::: . ..: :. .....:: . : : . ::. ::
XP_006 RPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNR
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 LLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLD-----------TT
.: :: .: : :.: .. :..: ... :. ::::.. : .::: :
XP_006 MLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTG
280 290 300 310 320 330
280 290 300 310
pF1KE0 KFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
.. : : . : :.. : ..::.:::.:.:.:
XP_006 PTLLPGTPARKRGNRRYCPIPDV--LCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKF
340 350 360 370 380 390
XP_006 LSRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRH
400 410 420 430 440 450
>>XP_016861328 (OMIM: 607037,615605) PREDICTED: peroxiso (515 aa)
initn: 468 init1: 286 opt: 441 Z-score: 548.7 bits: 110.4 E(85289): 8e-24
Smith-Waterman score: 455; 31.9% identity (60.1% similar) in 313 aa overlap (13-313:77-374)
10 20 30 40
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
:..: .:::. :. : :.: : :: ::
XP_016 LFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARP--VSSVGVVGLGTMGRGI
50 60 70 80 90 100
50 60 70 80 90 100
pF1KE0 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKK-KFAENPKAGDEFVEKTLSTIA
. : . :. ::. .. :: ..: : :.: :.: . . .: .: . . :..
XP_016 VISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPK--PRLTSSVK
110 120 130 140 150 160
110 120 130 140 150 160
pF1KE0 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATT
. ..:::.::. :....:...: .:. .... .:::.:.. ::..:
XP_016 E-------LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTD
170 180 190 200 210
170 180 190 200 210 220
pF1KE0 RQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNR
: : :::.:. ::::.::: . ..: :. .....:: . : : . ::. ::
XP_016 RPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNR
220 230 240 250 260 270
230 240 250 260 270
pF1KE0 LLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLD-----------TT
.: :: .: : :.: .. :..: ... :. ::::.. : .::: :
XP_016 MLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTG
280 290 300 310 320 330
280 290 300 310
pF1KE0 KFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
.. : : . : :.. : ..::.:::.:.:.:
XP_016 PTLLPGTPARKRGNRRYCPIPDV--LCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKF
340 350 360 370 380 390
XP_016 LSRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRH
400 410 420 430 440 450
>>XP_011510819 (OMIM: 607037,615605) PREDICTED: peroxiso (627 aa)
initn: 468 init1: 286 opt: 441 Z-score: 547.4 bits: 110.5 E(85289): 9.4e-24
Smith-Waterman score: 455; 31.9% identity (60.1% similar) in 313 aa overlap (13-313:189-486)
10 20 30 40
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
:..: .:::. :. : :.: : :: ::
XP_011 LFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARP--VSSVGVVGLGTMGRGI
160 170 180 190 200 210
50 60 70 80 90 100
pF1KE0 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKK-KFAENPKAGDEFVEKTLSTIA
. : . :. ::. .. :: ..: : :.: :.: . . .: .: . . :..
XP_011 VISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPK--PRLTSSVK
220 230 240 250 260 270
110 120 130 140 150 160
pF1KE0 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATT
. ..:::.::. :....:...: .:. .... .:::.:.. ::..:
XP_011 E-------LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTD
280 290 300 310 320
170 180 190 200 210 220
pF1KE0 RQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNR
: : :::.:. ::::.::: . ..: :. .....:: . : : . ::. ::
XP_011 RPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNR
330 340 350 360 370 380
230 240 250 260 270
pF1KE0 LLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLD-----------TT
.: :: .: : :.: .. :..: ... :. ::::.. : .::: :
XP_011 MLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTG
390 400 410 420 430 440
280 290 300 310
pF1KE0 KFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
.. : : . : :.. : ..::.:::.:.:.:
XP_011 PTLLPGTPARKRGNRRYCPIPDV--LCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKF
450 460 470 480 490 500
XP_011 LSRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRH
510 520 530 540 550 560
>>NP_001159887 (OMIM: 607037,615605) peroxisomal bifunct (627 aa)
initn: 468 init1: 286 opt: 441 Z-score: 547.4 bits: 110.5 E(85289): 9.4e-24
Smith-Waterman score: 455; 31.9% identity (60.1% similar) in 313 aa overlap (13-313:189-486)
10 20 30 40
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
:..: .:::. :. : :.: : :: ::
NP_001 LFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARP--VSSVGVVGLGTMGRGI
160 170 180 190 200 210
50 60 70 80 90 100
pF1KE0 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKK-KFAENPKAGDEFVEKTLSTIA
. : . :. ::. .. :: ..: : :.: :.: . . .: .: . . :..
NP_001 VISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPK--PRLTSSVK
220 230 240 250 260 270
110 120 130 140 150 160
pF1KE0 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATT
. ..:::.::. :....:...: .:. .... .:::.:.. ::..:
NP_001 E-------LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTD
280 290 300 310 320
170 180 190 200 210 220
pF1KE0 RQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNR
: : :::.:. ::::.::: . ..: :. .....:: . : : . ::. ::
NP_001 RPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNR
330 340 350 360 370 380
230 240 250 260 270
pF1KE0 LLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLD-----------TT
.: :: .: : :.: .. :..: ... :. ::::.. : .::: :
NP_001 MLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTG
390 400 410 420 430 440
280 290 300 310
pF1KE0 KFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
.. : : . : :.. : ..::.:::.:.:.:
NP_001 PTLLPGTPARKRGNRRYCPIPDV--LCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKF
450 460 470 480 490 500
NP_001 LSRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRH
510 520 530 540 550 560
>>NP_001957 (OMIM: 607037,615605) peroxisomal bifunction (723 aa)
initn: 468 init1: 286 opt: 441 Z-score: 546.5 bits: 110.5 E(85289): 1.1e-23
Smith-Waterman score: 455; 31.9% identity (60.1% similar) in 313 aa overlap (13-313:285-582)
10 20 30 40
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGI
:..: .:::. :. : :.: : :: ::
NP_001 LFLYLLQSGQARALQYAFFAERKANKWSTPSGASWKTASARP--VSSVGVVGLGTMGRGI
260 270 280 290 300 310
50 60 70 80 90 100
pF1KE0 AQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKK-KFAENPKAGDEFVEKTLSTIA
. : . :. ::. .. :: ..: : :.: :.: . . .: .: . . :..
NP_001 VISFARARIPVIAVDSDKNQLATANKMITSVLEKEASKMQQSGHPWSGPK--PRLTSSVK
320 330 340 350 360 370
110 120 130 140 150 160
pF1KE0 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATT
. ..:::.::. :....:...: .:. .... .:::.:.. ::..:
NP_001 E-------LGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCTNTSALDVDEIASSTD
380 390 400 410 420
170 180 190 200 210 220
pF1KE0 RQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNR
: : :::.:. ::::.::: . ..: :. .....:: . : : . ::. ::
NP_001 RPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKKIGVVVGNCFGFVGNR
430 440 450 460 470 480
230 240 250 260 270
pF1KE0 LLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVGLD-----------TT
.: :: .: : :.: .. :..: ... :. ::::.. : .::: :
NP_001 MLNPYYNQAYFLLEEG-SKPEEVDQVLEE-FGFKMGPFRVSDLAGLDVGWKSRKGQGLTG
490 500 510 520 530 540
280 290 300 310
pF1KE0 KFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK
.. : : . : :.. : ..::.:::.:.:.:
NP_001 PTLLPGTPARKRGNRRYCPIPDV--LCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKF
550 560 570 580 590
NP_001 LSRYRKTHHIEPRTISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRH
600 610 620 630 640 650
>>NP_057058 (OMIM: 609877) lambda-crystallin homolog [Ho (319 aa)
initn: 238 init1: 150 opt: 307 Z-score: 385.6 bits: 79.5 E(85289): 9.7e-15
Smith-Waterman score: 307; 28.3% identity (59.1% similar) in 237 aa overlap (30-262:9-241)
10 20 30 40 50 60
pF1KE0 MAFVTRQFMRSVSSSSTASASAKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE
:...:.:..: . :.. :. : : : :
NP_057 MASSAAGCVVIVGSGVIGRSWAMLFASGGFQVKLYD---
10 20 30
70 80 90 100 110 120
pF1KE0 DILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAI
: .. .. :..:: : . :. ::. :: :. . .:... . : .
NP_057 -IEQQQIRNALENIRKEMKLLEQAGSLKGSLSVEEQLSLISGCPNIQEAVEGAMHIQECV
40 50 60 70 80 90
130 140 150 160 170 180
pF1KE0 VENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKL
:.:..:...: .::.. ...:..:.:: :. ... . .. . : :: . :
NP_057 PEDLELKKKIFAQLDSIIDDRVILSSSTSCLMPSKLFAGLVHVKQCIVAHPVNPPYYIPL
100 110 120 130 140 150
190 200 210 220 230
pF1KE0 VEVIKTPMTSQKTFESLVDFSKALGKHPVSC-KDTPGFIVNRLLVPYLMEAIRLYERGDA
::.. : :. : . . : .:. :. :.. ::..::: . :: :: :.: .
NP_057 VELVPHPETAPTTVDRTHALMKKIGQCPMRVQKEVAGFVLNRLQYAIISEAWRLVEEGIV
160 170 180 190 200 210
240 250 260 270 280 290
pF1KE0 SKEDIDTAMKLGAGYP---MGPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKL
: :.: .:. : :. .::.: .
NP_057 SPSDLDLVMSEGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGIKHVLQTFGPIPEFSRA
220 230 240 250 260 270
314 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Thu Nov 3 08:54:35 2016 done: Thu Nov 3 08:54:36 2016
Total Scan time: 6.480 Total Display time: 0.030
Function used was FASTA [36.3.4 Apr, 2011]