FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2079, 752 aa 1>>>pF1KE2079 752 - 752 aa - 752 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8076+/-0.00103; mu= 18.2283+/- 0.062 mean_var=113.9767+/-23.267, 0's: 0 Z-trim(106.7): 168 B-trim: 346 in 2/50 Lambda= 0.120134 statistics sampled from 8958 (9162) to 8958 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.651), E-opt: 0.2 (0.281), width: 16 Scan time: 2.310 The best scores are: opt bits E(32554) CCDS4728.1 C2 gene_id:717|Hs108|chr6 ( 752) 5174 908.7 0 CCDS54991.1 C2 gene_id:717|Hs108|chr6 ( 620) 4104 723.2 3.1e-208 CCDS75428.1 C2 gene_id:717|Hs108|chr6 ( 506) 3171 561.4 1.3e-159 CCDS56416.1 C2 gene_id:717|Hs108|chr6 ( 538) 2902 514.8 1.4e-145 CCDS75427.1 C2 gene_id:717|Hs108|chr6 ( 328) 2007 359.4 5.1e-99 CCDS4729.1 CFB gene_id:629|Hs108|chr6 ( 764) 1849 332.4 1.6e-90 CCDS55189.1 CSMD1 gene_id:64478|Hs108|chr8 (3564) 360 75.0 2.3e-12 CCDS60082.1 CSMD2 gene_id:114784|Hs108|chr1 (3631) 341 71.7 2.3e-11 >>CCDS4728.1 C2 gene_id:717|Hs108|chr6 (752 aa) initn: 5174 init1: 5174 opt: 5174 Z-score: 4853.2 bits: 908.7 E(32554): 0 Smith-Waterman score: 5174; 100.0% identity (100.0% similar) in 752 aa overlap (1-752:1-752) 10 20 30 40 50 60 pF1KE2 MGPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MGPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 FILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKTKES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKTKES 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 LGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIITFAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIITFAS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 EPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGME 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 TMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDW 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 RELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQERTPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQERTPW 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 HVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 HVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 SPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTC 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 RDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 RDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVT 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 DQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRS 670 680 690 700 710 720 730 740 750 pF1KE2 KVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL :::::::::::::::::::::::::::::::: CCDS47 KVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL 730 740 750 >>CCDS54991.1 C2 gene_id:717|Hs108|chr6 (620 aa) initn: 4199 init1: 4104 opt: 4104 Z-score: 3852.0 bits: 723.2 E(32554): 3.1e-208 Smith-Waterman score: 4104; 100.0% identity (100.0% similar) in 605 aa overlap (148-752:16-620) 120 130 140 150 160 170 pF1KE2 EDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRC :::::::::::::::::::::::::::::: CCDS54 MGPLMVLFCLLFLYPAGHCPNPGISLGAVRTGFRFGHGDKVRYRC 10 20 30 40 180 190 200 210 220 230 pF1KE2 SSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 SSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKT 50 60 70 80 90 100 240 250 260 270 280 290 pF1KE2 KESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 KESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIIT 110 120 130 140 150 160 300 310 320 330 340 350 pF1KE2 FASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 FASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLL 170 180 190 200 210 220 360 370 380 390 400 410 pF1KE2 GMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 GMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLD 230 240 250 260 270 280 420 430 440 450 460 470 pF1KE2 VDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 VDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQER 290 300 310 320 330 340 480 490 500 510 520 530 pF1KE2 TPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 TPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEK 350 360 370 380 390 400 540 550 560 570 580 590 pF1KE2 AVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 AVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQG 410 420 430 440 450 460 600 610 620 630 640 650 pF1KE2 STCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 STCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVRE 470 480 490 500 510 520 660 670 680 690 700 710 pF1KE2 VVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS54 VVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRA 530 540 550 560 570 580 720 730 740 750 pF1KE2 PRSKVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL ::::::::::::::::::::::::::::::::::: CCDS54 PRSKVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL 590 600 610 620 >>CCDS75428.1 C2 gene_id:717|Hs108|chr6 (506 aa) initn: 3171 init1: 3171 opt: 3171 Z-score: 2979.2 bits: 561.4 E(32554): 1.3e-159 Smith-Waterman score: 3171; 100.0% identity (100.0% similar) in 469 aa overlap (284-752:38-506) 260 270 280 290 300 310 pF1KE2 NLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIITFASEPKVLMSVLNDNS :::::::::::::::::::::::::::::: CCDS75 AAPRILCSRGLRSGSARATGSGVERSPSAAIFSFEINVSVAIITFASEPKVLMSVLNDNS 10 20 30 40 50 60 320 330 340 350 360 370 pF1KE2 RDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIIL 70 80 90 100 110 120 380 390 400 410 420 430 pF1KE2 LTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKKDGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKKDGE 130 140 150 160 170 180 440 450 460 470 480 490 pF1KE2 RHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQERTPWHVTIKPKSQETCR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 RHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQERTPWHVTIKPKSQETCR 190 200 210 220 230 240 500 510 520 530 540 550 pF1KE2 GALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 GALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQG 250 260 270 280 290 300 560 570 580 590 600 610 pF1KE2 ILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 ILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSV 310 320 330 340 350 360 620 630 640 650 660 670 pF1KE2 PAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDES 370 380 390 400 410 420 680 690 700 710 720 730 pF1KE2 PCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 PCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRDFHINLF 430 440 450 460 470 480 740 750 pF1KE2 RMQPWLRQHLGDVLNFLPL ::::::::::::::::::: CCDS75 RMQPWLRQHLGDVLNFLPL 490 500 >>CCDS56416.1 C2 gene_id:717|Hs108|chr6 (538 aa) initn: 2902 init1: 2902 opt: 2902 Z-score: 2726.9 bits: 514.8 E(32554): 1.4e-145 Smith-Waterman score: 3352; 85.0% identity (85.0% similar) in 605 aa overlap (148-752:25-538) 120 130 140 150 160 170 pF1KE2 EDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRC :::::::::::::::::::::::::::::: CCDS56 MRALCIRETCSSELGFSRNWSRRKAGHCPNPGISLGAVRTGFRFGHGDKVRYRC 10 20 30 40 50 180 190 200 210 220 230 pF1KE2 SSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 SSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKT 60 70 80 90 100 110 240 250 260 270 280 290 pF1KE2 KESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFEINVSVAIIT : CCDS56 K----------------------------------------------------------- 300 310 320 330 340 350 pF1KE2 FASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLL :::::::::::::::::::::::::::: CCDS56 --------------------------------DHENGTGTNTYAALNSVYLMMNNQMRLL 120 130 140 360 370 380 390 400 410 pF1KE2 GMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 GMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLD 150 160 170 180 190 200 420 430 440 450 460 470 pF1KE2 VDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSKLTDTICGVGNMSANASDQER 210 220 230 240 250 260 480 490 500 510 520 530 pF1KE2 TPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 TPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEK 270 280 290 300 310 320 540 550 560 570 580 590 pF1KE2 AVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 AVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQG 330 340 350 360 370 380 600 610 620 630 640 650 pF1KE2 STCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 STCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKTMFPNLTDVRE 390 400 410 420 430 440 660 670 680 690 700 710 pF1KE2 VVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 VVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRA 450 460 470 480 490 500 720 730 740 750 pF1KE2 PRSKVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL ::::::::::::::::::::::::::::::::::: CCDS56 PRSKVPPPRDFHINLFRMQPWLRQHLGDVLNFLPL 510 520 530 >>CCDS75427.1 C2 gene_id:717|Hs108|chr6 (328 aa) initn: 2007 init1: 2007 opt: 2007 Z-score: 1891.2 bits: 359.4 E(32554): 5.1e-99 Smith-Waterman score: 2009; 88.4% identity (93.3% similar) in 328 aa overlap (1-316:1-328) 10 20 30 40 50 60 pF1KE2 MGPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 MGPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 FILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 FILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 LVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKTKES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 LVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKTKES 190 200 210 220 230 240 250 260 270 280 290 pF1KE2 LGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRIFSFE---------INV :::::::::::::::::::::::::::::::::::::::::::. . : ... CCDS75 LGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMVDRVRNQESACSRGLPVLTI 250 260 270 280 290 300 300 310 320 330 340 pF1KE2 SVAIITFASEP---KVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYAALNSVYL :. .. . : ..:. :..: .. : CCDS75 SLCLLPLLRTPLTAHLLQEVFSDYTHAM 310 320 >>CCDS4729.1 CFB gene_id:629|Hs108|chr6 (764 aa) initn: 1524 init1: 548 opt: 1849 Z-score: 1738.6 bits: 332.4 E(32554): 1.6e-90 Smith-Waterman score: 1849; 39.8% identity (69.6% similar) in 757 aa overlap (17-750:30-764) 10 20 30 40 pF1KE2 MGPLMVLFCLLFLYPGLADSAPSCP-QNVNISGGTFTLSHGWAPGSL :: :: ..:.:.::.: : . :. CCDS47 MGSNLSPQLCLMPFILGLLSGGVTTTPWSLARPQGSCSLEGVEIKGGSFRLLQ---EGQA 10 20 30 40 50 50 60 70 80 90 100 pF1KE2 LTYSCPQGLYPSPA-SRLCKSSGQWQT--PGATRSLSKAVCKPVRCPAPVSFENGIYTPR : : ::.:.:: :. .: :.:.:.:.: ... :: :. ..:: : .:::: : :: CCDS47 LEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPR 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE2 LGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRT : :. ..::.: ::. :::: : :. :: :.:.::.::::::.: :::: .:. .. CCDS47 SPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKV 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE2 GFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTS : .. :.: :.:: .:.: ::..: :: .: :::::: :.. . :: :..:: :. .: CCDS47 GSQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSS 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE2 FSHMLGATNPT--QKTKESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESASLMV ... . ... . :. ::: .. :: .:.::.:: :.:.. ..: :. .. CCDS47 LTETIEGVDAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSDSIGASNFTGAKKCLVNLI 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE2 DRIFSFEINVSVAIITFASEPKVLMSVLNDNSRDMTEVISSLENANYKDHENGTGTNTYA ... :. .. ...:.:. ::. ..: . .: . : ..:.. ::.::. .:::: CCDS47 EKVASYGVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKK 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE2 ALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKSNMGGSPKTAVDHIREILNINQK ::..:: ::. . .:.. ::.:::.::: ::::.: :..:.::..: :.. CCDS47 ALQAVYSMMSWPD---DVPPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKD 360 370 380 390 400 410 410 420 430 440 450 pF1KE2 RN----DYLDIYAIGVGKLDVDWRELNELGSKKDGERHAFILQDTKALHQVFEHMLDVSK :. ::::.:..::: : :. ..: :.::::.:.:.: ..: . :..:: .:.: :. CCDS47 RKNPREDYLDVYVFGVGPL-VNQVNINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQ 420 430 440 450 460 470 460 470 480 490 500 510 pF1KE2 LTDTICGVGNMSANASDQERTPWHV---TIKP-KSQETCRGALISDQWVLTAAHCFR-DG . ..::. ...: .. ::.. .:.: :..:.: ::..:. .:::::::: : CCDS47 -SLSLCGMVWEHRKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDD 480 490 500 510 520 530 520 530 540 550 560 570 pF1KE2 NDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKLAQKVK ..::. .:.:: : ... :: ... :.... .::. :: ::: :.::.:: .:.: CCDS47 KEHSI-KVSVGGEK----RDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK 540 550 560 570 580 580 590 600 610 620 pF1KE2 MSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLN---INL .. :::::::: .. ::: : .::.....::: :.. : ::. . .::. . . CCDS47 YGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYI 590 600 610 620 630 640 630 640 650 660 670 680 pF1KE2 KMGVEWTSCAEVVSQEKTMFPNLTDVREVVTDQFLCSG---TQEDESPCKGESGGAVFLE : : . :: : .: . .. :. :::: .:::.: : . :.:.::: .... CCDS47 KNGDKKGSC-ERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVH 650 660 670 680 690 700 690 700 710 720 730 740 pF1KE2 RRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPP-PRDFHINLFRMQPWLRQHLGD .: ::.:::..:::. . : ::... ...:: ::::::::.. :::...: : CCDS47 KRSRFIQVGVISWGVVDVC-----KNQKR---QKQVPAHARDFHINLFQVLPWLKEKLQD 710 720 730 740 750 750 pF1KE2 V-LNFLPL :.:: CCDS47 EDLGFL 760 >>CCDS55189.1 CSMD1 gene_id:64478|Hs108|chr8 (3564 aa) initn: 597 init1: 165 opt: 360 Z-score: 335.5 bits: 75.0 E(32554): 2.3e-12 Smith-Waterman score: 380; 31.7% identity (56.2% similar) in 224 aa overlap (20-231:3028-3238) 10 20 30 40 pF1KE2 MGPLMVLFCLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLT- .::.: .. : ::..: :. .: CCDS55 SSSVIYACWEGYKTSGLMTRHCTANGTWTGTAPDC--TIISCGDPGTLANGIQFGTDFTF 3000 3010 3020 3030 3040 3050 50 60 70 80 90 100 pF1KE2 -----YSCPQGLYP---SPASRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIY :.: : . :. : ..:.:. : :: ::: : :: : .:: CCDS55 NKTVSYQCNPGYVMEAVTSATIRCTKDGRWN-P------SKPVCKAVLCPQPPPVQNG-- 3060 3070 3080 3090 3100 110 120 130 140 150 160 pF1KE2 TPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGA : . ... :...:. : ::. : : . .:. :.: :: : : .::: . CCDS55 TVEGSDFRWGSSISYSCMDGYQLSHSAILSCEGRGVWKGEIPQCL--PVFCGDPGIPAEG 3110 3120 3130 3140 3150 3160 170 180 190 200 210 220 pF1KE2 VRTGFRFGHGDKVRYRCSSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPAL .: : . ..: ..:.: ..:.:::.: ::..:.::: .: : .: :. .: . CCDS55 RLSGKSFTYKSEVFFQCKSPFILVGSSRRVCQADGTWSGIQPTCIDPAHNTCPDPGTPHF 3170 3180 3190 3200 3210 3220 230 240 250 260 270 pF1KE2 G---TSFSHMLGATNPTQKTKESLGRKIQIQRSGHLNLYLLLDCSQSVSENDFLIFKESA : .: .. .:.: CCDS55 GIQNSSRGYEVGSTVFFRCRKGYHIQGSTTRTCLANLTWSGIQTECIPHACRQPETPAHA 3230 3240 3250 3260 3270 3280 >>CCDS60082.1 CSMD2 gene_id:114784|Hs108|chr1 (3631 aa) initn: 844 init1: 183 opt: 341 Z-score: 317.6 bits: 71.7 E(32554): 2.3e-11 Smith-Waterman score: 341; 33.9% identity (56.0% similar) in 168 aa overlap (39-204:2874-3032) 10 20 30 40 50 60 pF1KE2 CLLFLYPGLADSAPSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPASRL-CKSS : .. :. ..: : .:.: . : :... CCDS60 SDMLPTCRIINCTDPGHQENSVRQVHASGPHRFSFGTTVSYRCNHGFYLLGTPVLSCQGD 2850 2860 2870 2880 2890 2900 70 80 90 100 110 120 pF1KE2 GQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSP : :. : . : : : : : .. .. :: ::. : . : : :. CCDS60 GTWDRP-------RPQCLLVSCGHPGSPPHSQMSG--DSYTVGAVVRYSCIGKRTLVGNS 2910 2920 2930 2940 2950 130 140 150 160 170 180 pF1KE2 VRQCRPNGMWDGETAVCDN-GAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSNLVLTGS .:.: .: : : :.. ..: : .::: ..: : : : .:. : .. :: :: CCDS60 TRMCGLDGHWTGSLPHCSGTSVGVCGDPGIPAHGIRLGDSFDPGTVMRFSCEAGHVLRGS 2960 2970 2980 2990 3000 3010 190 200 210 220 230 240 pF1KE2 SERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFSHMLGATNPTQKTKESLGRKIQ ::: ::.:: :::..: : CCDS60 SERTCQANGSWSGSQPECGVISCGNPGTPSNARVVFSDGLVFSSSIVYECREGYYATGLL 3020 3030 3040 3050 3060 3070 752 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 20:30:54 2016 done: Sun Nov 6 20:30:54 2016 Total Scan time: 2.310 Total Display time: 0.100 Function used was FASTA [36.3.4 Apr, 2011]