Result of FASTA (omim) for pFN21AB7924
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7924, 346 aa
  1>>>pF1KB7924 346 - 346 aa - 346 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.3851+/-0.000322; mu= 1.0618+/- 0.020
 mean_var=241.8567+/-48.602, 0's: 0 Z-trim(124.2): 29  B-trim: 66 in 1/58
 Lambda= 0.082470
 statistics sampled from 45376 (45409) to 45376 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.817), E-opt: 0.2 (0.532), width:  16
 Scan time:  9.930

The best scores are:                                      opt bits E(85289)
NP_001942 (OMIM: 600967) transcription factor E2F5 ( 346) 2297 285.3 1.4e-76
NP_001077057 (OMIM: 600967) transcription factor E ( 345) 2280 283.2 5.6e-76
NP_001077058 (OMIM: 600967) transcription factor E ( 185) 1231 158.2 1.3e-38
NP_001941 (OMIM: 600659) transcription factor E2F4 ( 413) 1109 144.0 5.6e-34
XP_011539170 (OMIM: 600426) PREDICTED: transcripti ( 435)  554 77.9 4.4e-14
NP_004082 (OMIM: 600426) transcription factor E2F2 ( 437)  518 73.7 8.6e-13
XP_011539172 (OMIM: 600426) PREDICTED: transcripti ( 350)  504 71.9 2.3e-12
XP_005248923 (OMIM: 600427) PREDICTED: transcripti ( 335)  481 69.2 1.5e-11
XP_011512630 (OMIM: 600427) PREDICTED: transcripti ( 338)  481 69.2 1.5e-11
XP_005248922 (OMIM: 600427) PREDICTED: transcripti ( 340)  481 69.2 1.5e-11
XP_016865819 (OMIM: 600427) PREDICTED: transcripti ( 379)  481 69.2 1.6e-11
NP_001940 (OMIM: 600427) transcription factor E2F3 ( 465)  481 69.3 1.9e-11
NP_001230005 (OMIM: 600427) transcription factor E ( 334)  470 67.9 3.7e-11
XP_011512626 (OMIM: 600427) PREDICTED: transcripti ( 459)  470 68.0 4.7e-11
NP_001265204 (OMIM: 602944) transcription factor E ( 249)  404 59.9 6.8e-09
NP_937987 (OMIM: 602944) transcription factor E2F6 ( 281)  404 60.0 7.4e-09
NP_005216 (OMIM: 189971) transcription factor E2F1 ( 437)  396 59.1   2e-08
NP_001265207 (OMIM: 602944) transcription factor E ( 206)  371 55.9 8.9e-08
NP_001265205 (OMIM: 602944) transcription factor E ( 206)  371 55.9 8.9e-08
NP_001265206 (OMIM: 602944) transcription factor E ( 206)  371 55.9 8.9e-08
XP_016859037 (OMIM: 602944) PREDICTED: transcripti ( 287)  371 56.0 1.1e-07
XP_016859036 (OMIM: 602944) PREDICTED: transcripti ( 319)  371 56.1 1.2e-07
XP_016859038 (OMIM: 602944) PREDICTED: transcripti ( 244)  338 52.1 1.5e-06


>>NP_001942 (OMIM: 600967) transcription factor E2F5 iso  (346 aa)
 initn: 2297 init1: 2297 opt: 2297  Z-score: 1496.0  bits: 285.3 E(85289): 1.4e-76
Smith-Waterman score: 2297; 100.0% identity (100.0% similar) in 346 aa overlap (1-346:1-346)

               10        20        30        40        50        60
pF1KB7 MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 CFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 FPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISG
              250       260       270       280       290       300

              310       320       330       340      
pF1KB7 DIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
       ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
              310       320       330       340      

>>NP_001077057 (OMIM: 600967) transcription factor E2F5   (345 aa)
 initn: 1947 init1: 1947 opt: 2280  Z-score: 1485.0  bits: 283.2 E(85289): 5.6e-76
Smith-Waterman score: 2280; 99.7% identity (99.7% similar) in 346 aa overlap (1-346:1-345)

               10        20        30        40        50        60
pF1KB7 MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTT
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 CFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVV
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 FPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISG
       :::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::
NP_001 FPVPPPDDLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISS-GSISG
              250       260       270       280       290          

              310       320       330       340      
pF1KB7 DIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
       ::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
     300       310       320       330       340     

>>NP_001077058 (OMIM: 600967) transcription factor E2F5   (185 aa)
 initn: 1231 init1: 1231 opt: 1231  Z-score: 814.3  bits: 158.2 E(85289): 1.3e-38
Smith-Waterman score: 1231; 100.0% identity (100.0% similar) in 185 aa overlap (162-346:1-185)

             140       150       160       170       180       190 
pF1KB7 YLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQ
                                     ::::::::::::::::::::::::::::::
NP_001                               MDDSINNRFSYVTHEDICNCFNGDTLLAIQ
                                             10        20        30

             200       210       220       230       240       250 
pF1KB7 APSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 APSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDDLTQ
               40        50        60        70        80        90

             260       270       280       290       300       310 
pF1KB7 PSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDV
              100       110       120       130       140       150

             320       330       340      
pF1KB7 FPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
       :::::::::::::::::::::::::::::::::::
NP_001 FPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY
              160       170       180     

>>NP_001941 (OMIM: 600659) transcription factor E2F4 [Ho  (413 aa)
 initn: 1065 init1: 864 opt: 1109  Z-score: 731.0  bits: 144.0 E(85289): 5.6e-34
Smith-Waterman score: 1109; 62.3% identity (75.8% similar) in 297 aa overlap (33-323:6-295)

             10        20        30        40        50        60  
pF1KB7 AAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRHEKSLGLLTTKF
                                     :: ::::      :  ::::::::::::::
NP_001                          MAEAGPQAPPPP------GTPSRHEKSLGLLTTKF
                                        10              20         

             70        80        90       100       110       120  
pF1KB7 VSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCN
       ::::::::::::::: ::::::::::::::::::::::: :::::::::::::::: :::
NP_001 VSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGPGCN
      30        40        50        60        70        80         

            130       140       150       160       170       180  
pF1KB7 TKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCF
       :.:. :.:  ::::::.:. .:.::::.:.:.::::.:: .:  :. ..:::::::: ::
NP_001 TREIADKLIELKAEIEELQQREQELDQHKVWVQQSIRNVTEDVQNSCLAYVTHEDICRCF
      90       100       110       120       130       140         

            190       200       210       220       230       240  
pF1KB7 NGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFP
        :::::::.:::::.::::::: : ::::::::.::: ::::.:::.:::. :: ::. :
NP_001 AGDTLLAIRAPSGTSLEVPIPE-GLNGQKKYQIHLKSVSGPIEVLLVNKEAWSSPPVAVP
     150       160       170        180       190       200        

            250        260       270       280       290           
pF1KB7 VPPPDDLTQ-PSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAG-----
       ::::.:: : ::. :  :  :. .   .:.  . .  . . .    ::   . ::     
NP_001 VPPPEDLLQSPSAVSTPPPLPKPALAQSQEASRPNSPQLTPTAVPGSAEVQGMAGPAAEI
      210       220       230       240       250       260        

        300       310       320       330       340                
pF1KB7 SISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILNY          
       ..::    .  .:  .  : :.::  :                                 
NP_001 TVSGGPGTDSKDSGELSSLPLGPTTLDTRPLQSSALLDSSSSSSSSSSSSSNSNSSSSSG
      270       280       290       300       310       320        

>>XP_011539170 (OMIM: 600426) PREDICTED: transcription f  (435 aa)
 initn: 255 init1: 152 opt: 554  Z-score: 373.8  bits: 77.9 E(85289): 4.4e-14
Smith-Waterman score: 554; 36.4% identity (60.9% similar) in 343 aa overlap (16-340:93-425)

                              10        20        30          40   
pF1KB7                MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPP--PPPQLGG
                                     : :.   :    :...  .    : :.   
XP_011 LDATPHGPEGQVVRCLPAGRLPAKRKLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPK
             70        80        90       100       110       120  

            50        60        70        80        90       100   
pF1KB7 AGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDL
       . : ..:.. :::::: ::. ::.:..::::::. ::..: : :::::::::::::::.:
XP_011 SPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQL
            130       140       150       160        170       180 

           110       120       130       140       150       160   
pF1KB7 IEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMD
       :.::.::.:: .:.    .      . . :  :...:   :. :::     . :.:.. .
XP_011 IRKKAKNNIQGRGM---FEDPTRPGKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTE
             190          200       210       220       230        

           170         180       190       200       210       220 
pF1KB7 DSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
       :. :.:..:::..::   . :. .:..:..::  :.::::     .  . . :: ::: .
XP_011 DKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVP-----DRTEDNLQIYLKSTQ
      240       250       260       270            280       290   

             230        240             250         260        270 
pF1KB7 GPIHVLLINKE-SSSSKPVVFPVP------PPDDLTQPSSQSLTP--VTPQKSSM-ATQN
       :::.: :  .: .  ..:   :.:      :  : .:::: :  :  . :  ::. :   
XP_011 GPIEVYLCPEEVQEPDSPSEEPLPSTSTLCPSPDSAQPSS-STDPSIMEPTASSVPAPAP
           300       310       320       330        340       350  

             280       290       300       310          320        
pF1KB7 LPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVF---PLLRLSPT-PADDYNF
        :.:     : .  ... . .     .  .  :...:  .    ::. .::.   ::: .
XP_011 TPQQAPPPPSLVPLEATDSLLELPHPLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLW
            360       370       380       390       400       410  

       330       340          
pF1KB7 NLDDNEGVCDLFDVQILNY    
       .:. .::. ::::          
XP_011 GLEAGEGISDLFDSYDLGDLLIN
            420       430     

>>NP_004082 (OMIM: 600426) transcription factor E2F2 [Ho  (437 aa)
 initn: 271 init1: 168 opt: 518  Z-score: 350.6  bits: 73.7 E(85289): 8.6e-13
Smith-Waterman score: 574; 37.0% identity (61.2% similar) in 343 aa overlap (16-340:93-427)

                              10        20        30          40   
pF1KB7                MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPP--PPPQLGG
                                     : :.   :    :...  .    : :.   
NP_004 LDATPHGPEGQVVRCLPAGRLPAKRKLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPK
             70        80        90       100       110       120  

            50        60        70        80        90       100   
pF1KB7 AGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDL
       . : ..:.. :::::: ::. ::.:..::::::. ::..: : :::::::::::::::.:
NP_004 SPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQL
            130       140       150       160        170       180 

           110       120       130       140       150       160   
pF1KB7 IEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMD
       :.::.::.::: : :   .  .   . . :  :...:   :. :::     . :.:.. .
NP_004 IRKKAKNNIQWVGRGMFEDPTRP-GKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTE
             190       200        210       220       230       240

           170         180       190       200       210       220 
pF1KB7 DSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
       :. :.:..:::..::   . :. .:..:..::  :.::::     .  . . :: ::: .
NP_004 DKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVP-----DRTEDNLQIYLKSTQ
              250       260       270       280            290     

             230        240             250         260        270 
pF1KB7 GPIHVLLINKE-SSSSKPVVFPVP------PPDDLTQPSSQSLTP--VTPQKSSM-ATQN
       :::.: :  .: .  ..:   :.:      :  : .:::: :  :  . :  ::. :   
NP_004 GPIEVYLCPEEVQEPDSPSEEPLPSTSTLCPSPDSAQPSS-STDPSIMEPTASSVPAPAP
         300       310       320       330        340       350    

             280       290       300       310          320        
pF1KB7 LPEQHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVF---PLLRLSPT-PADDYNF
        :.:     : .  ... . .     .  .  :...:  .    ::. .::.   ::: .
NP_004 TPQQAPPPPSLVPLEATDSLLELPHPLLQQTEDQFLSPTLACSSPLISFSPSLDQDDYLW
          360       370       380       390       400       410    

       330       340          
pF1KB7 NLDDNEGVCDLFDVQILNY    
       .:. .::. ::::          
NP_004 GLEAGEGISDLFDSYDLGDLLIN
          420       430       

>>XP_011539172 (OMIM: 600426) PREDICTED: transcription f  (350 aa)
 initn: 471 init1: 168 opt: 504  Z-score: 343.0  bits: 71.9 E(85289): 2.3e-12
Smith-Waterman score: 504; 39.2% identity (63.8% similar) in 265 aa overlap (16-269:93-350)

                              10        20        30          40   
pF1KB7                MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPP--PPPQLGG
                                     : :.   :    :...  .    : :.   
XP_011 LDATPHGPEGQVVRCLPAGRLPAKRKLDLEGIGRPVVPEFPTPKGKCIRVDGLPSPKTPK
             70        80        90       100       110       120  

            50        60        70        80        90       100   
pF1KB7 AGGGSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDL
       . : ..:.. :::::: ::. ::.:..::::::. ::..: : :::::::::::::::.:
XP_011 SPGEKTRYDTSLGLLTKKFIYLLSESEDGVLDLNWAAEVLDV-QKRRIYDITNVLEGIQL
            130       140       150       160        170       180 

           110       120       130       140       150       160   
pF1KB7 IEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMD
       :.::.::.::: : :   .  .   . . :  :...:   :. :::     . :.:.. .
XP_011 IRKKAKNNIQWVGRGMFEDPTRP-GKQQQLGQELKELMNTEQALDQLIQSCSLSFKHLTE
             190       200        210       220       230       240

           170         180       190       200       210       220 
pF1KB7 DSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
       :. :.:..:::..::   . :. .:..:..::  :.::::     .  . . :: ::: .
XP_011 DKANKRLAYVTYQDIRAVGNFKEQTVIAVKAPPQTRLEVP-----DRTEDNLQIYLKSTQ
              250       260       270       280            290     

             230        240             250       260       270    
pF1KB7 GPIHVLLINKE-SSSSKPVVFPVP------PPDDLTQPSSQSLTPVTPQKSSMATQNLPE
       :::.: :  .: .  ..:   :.:      :  : .::::..   .    .: :.     
XP_011 GPIEVYLCPEEVQEPDSPSEEPLPSTSTLCPSPDSAQPSSSTDPSIMEPTASSAS     
         300       310       320       330       340       350     

          280       290       300       310       320       330    
pF1KB7 QHVSERSQALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEG

>>XP_005248923 (OMIM: 600427) PREDICTED: transcription f  (335 aa)
 initn: 327 init1: 167 opt: 481  Z-score: 328.4  bits: 69.2 E(85289): 1.5e-11
Smith-Waterman score: 534; 34.2% identity (64.3% similar) in 339 aa overlap (8-340:17-319)

                        10        20        30        40        50 
pF1KB7          MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGSSRH
                       :.: ..: :.:..    :. :..    :  : .       ..:.
XP_005 MAKRRLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKT----PKSPSE-------KTRY
               10        20        30            40                

              60        70        80        90       100       110 
pF1KB7 EKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNS
       . :::::: ::..::... ::::::. ::..: : ::::::::::::::: ::.:::::.
XP_005 DTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKSKNN
      50        60        70        80         90       100        

             120          130       140       150       160        
pF1KB7 IQWKGVGAGCNTKE---VIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINN
       .::     ::. .:   .. . . :. :. .:  .:..::.       ..: . .:: :.
XP_005 VQW----MGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDSENQ
      110           120       130       140       150       160    

      170         180       190       200       210       220      
pF1KB7 RFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHV
       :..:::..::   . .. .:.....::  :.::::      .. .. ::.: : .:::.:
XP_005 RLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVP------DSIESLQIHLASTQGPIEV
          170       180       190             200       210        

        230       240        250       260       270       280     
pF1KB7 LLINKESSSSKPVVFPVPPPD-DLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQ
        :  .:. . .:.       . .. .:.:..:. ..  .:. ...    . ..  .. ::
XP_005 YLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPANLLQ
      220       230       240       250       260       270        

         290       300       310       320       330       340     
pF1KB7 QTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQILN
       ::   .: :  .. : ... :      :::.      .:: ..: ..::. ::::     
XP_005 QTE-DQIPS--NLEGPFVNLLP-----PLLQ------EDYLLSLGEEEGISDLFDAYDLE
      280          290            300             310       320    

                  
pF1KB7 Y          
                  
XP_005 KLPLVEDFMCS
          330     

>>XP_011512630 (OMIM: 600427) PREDICTED: transcription f  (338 aa)
 initn: 327 init1: 167 opt: 481  Z-score: 328.4  bits: 69.2 E(85289): 1.5e-11
Smith-Waterman score: 534; 34.2% identity (64.3% similar) in 339 aa overlap (8-340:20-322)

                           10        20        30        40        
pF1KB7             MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGGGS
                          :.: ..: :.:..    :. :..    :  : .       .
XP_011 MTLEAKRRLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKT----PKSPSE-------K
               10        20        30        40                    

       50        60        70        80        90       100        
pF1KB7 SRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKS
       .:.. :::::: ::..::... ::::::. ::..: : ::::::::::::::: ::.:::
XP_011 TRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKKKS
      50        60        70        80         90       100        

      110       120          130       140       150       160     
pF1KB7 KNSIQWKGVGAGCNTKE---VIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDS
       ::..::     ::. .:   .. . . :. :. .:  .:..::.       ..: . .::
XP_011 KNNVQW----MGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTEDS
      110           120       130       140       150       160    

         170         180       190       200       210       220   
pF1KB7 INNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGP
        :.:..:::..::   . .. .:.....::  :.::::      .. .. ::.: : .::
XP_011 ENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVP------DSIESLQIHLASTQGP
          170       180       190       200             210        

           230       240        250       260       270       280  
pF1KB7 IHVLLINKESSSSKPVVFPVPPPD-DLTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQ
       :.: :  .:. . .:.       . .. .:.:..:. ..  .:. ...    . ..  ..
XP_011 IEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASPAN
      220       230       240       250       260       270        

            290       300       310       320       330       340  
pF1KB7 ALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFDVQ
        ::::   .: :  .. : ... :      :::.      .:: ..: ..::. ::::  
XP_011 LLQQTE-DQIPS--NLEGPFVNLLP-----PLLQ------EDYLLSLGEEEGISDLFDAY
      280          290       300                  310       320    

                     
pF1KB7 ILNY          
                     
XP_011 DLEKLPLVEDFMCS
          330        

>>XP_005248922 (OMIM: 600427) PREDICTED: transcription f  (340 aa)
 initn: 327 init1: 167 opt: 481  Z-score: 328.3  bits: 69.2 E(85289): 1.5e-11
Smith-Waterman score: 534; 34.2% identity (64.3% similar) in 339 aa overlap (8-340:22-324)

                             10        20        30        40      
pF1KB7               MAAAEPASSGQQAPAGQGQGQRPPPQPPQAQAPQPPPPPQLGGAGG
                            :.: ..: :.:..    :. :..    :  : .      
XP_005 MPLQQQAKRRLELGESGHQYLSDGLKTPKGKGRAALRSPDSPKT----PKSPSE------
               10        20        30        40            50      

         50        60        70        80        90       100      
pF1KB7 GSSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEK
        ..:.. :::::: ::..::... ::::::. ::..: : ::::::::::::::: ::.:
XP_005 -KTRYDTSLGLLTKKFIQLLSQSPDGVLDLNKAAEVLKV-QKRRIYDITNVLEGIHLIKK
                60        70        80         90       100        

        110       120          130       140       150       160   
pF1KB7 KSKNSIQWKGVGAGCNTKE---VIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMD
       ::::..::     ::. .:   .. . . :. :. .:  .:..::.       ..: . .
XP_005 KSKNNVQW----MGCSLSEDGGMLAQCQGLSKEVTELSQEEKKLDELIQSCTLDLKLLTE
      110           120       130       140       150       160    

           170         180       190       200       210       220 
pF1KB7 DSINNRFSYVTHEDI--CNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHS
       :: :.:..:::..::   . .. .:.....::  :.::::      .. .. ::.: : .
XP_005 DSENQRLAYVTYQDIRKISGLKDQTVIVVKAPPETRLEVP------DSIESLQIHLASTQ
          170       180       190       200             210        

             230       240        250       260       270       280
pF1KB7 GPIHVLLINKESSSSKPVVFPVPPPD-DLTQPSSQSLTPVTPQKSSMATQNLPEQHVSER
       :::.: :  .:. . .:.       . .. .:.:..:. ..  .:. ...    . ..  
XP_005 GPIEVYLCPEETETHSPMKTNNQDHNGNIPKPASKDLASTNSGHSDCSVSMGNLSPLASP
      220       230       240       250       260       270        

              290       300       310       320       330       340
pF1KB7 SQALQQTSATDISSAGSISGDIIDELMSSDVFPLLRLSPTPADDYNFNLDDNEGVCDLFD
       .. ::::   .: :  .. : ... :      :::.      .:: ..: ..::. ::::
XP_005 ANLLQQTE-DQIPS--NLEGPFVNLLP-----PLLQ------EDYLLSLGEEEGISDLFD
      280        290         300                  310       320    

                       
pF1KB7 VQILNY          
                       
XP_005 AYDLEKLPLVEDFMCS
          330       340




346 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 21:04:35 2016 done: Sun Nov  6 21:04:36 2016
 Total Scan time:  9.930 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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