FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2030, 620 aa 1>>>pF1KE2030 620 - 620 aa - 620 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2972+/-0.00114; mu= 13.5962+/- 0.068 mean_var=72.8396+/-15.197, 0's: 0 Z-trim(102.3): 42 B-trim: 27 in 1/47 Lambda= 0.150276 statistics sampled from 6852 (6869) to 6852 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.574), E-opt: 0.2 (0.211), width: 16 Scan time: 2.610 The best scores are: opt bits E(32554) CCDS9542.2 CDC16 gene_id:8881|Hs108|chr13 ( 620) 4149 909.4 0 CCDS81786.1 CDC16 gene_id:8881|Hs108|chr13 ( 619) 4131 905.5 0 CCDS81787.1 CDC16 gene_id:8881|Hs108|chr13 ( 526) 3511 771.1 0 >>CCDS9542.2 CDC16 gene_id:8881|Hs108|chr13 (620 aa) initn: 4149 init1: 4149 opt: 4149 Z-score: 4860.1 bits: 909.4 E(32554): 0 Smith-Waterman score: 4149; 100.0% identity (100.0% similar) in 620 aa overlap (1-620:1-620) 10 20 30 40 50 60 pF1KE2 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF 550 560 570 580 590 600 610 620 pF1KE2 EIEMNESDMMLETSMSDHST :::::::::::::::::::: CCDS95 EIEMNESDMMLETSMSDHST 610 620 >>CCDS81786.1 CDC16 gene_id:8881|Hs108|chr13 (619 aa) initn: 3921 init1: 3921 opt: 4131 Z-score: 4839.1 bits: 905.5 E(32554): 0 Smith-Waterman score: 4131; 99.8% identity (99.8% similar) in 620 aa overlap (1-620:1-619) 10 20 30 40 50 60 pF1KE2 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHAL ::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::: CCDS81 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSRE-PQDIYWLAQCLYLTAQYHRAAHAL 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 RSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSD 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 WEMSQSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQE 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 EKELLESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAER 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 HYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPV 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 SWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTA 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE2 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 AQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKT 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE2 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 AEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNAS 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE2 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 TYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKD 480 490 500 510 520 530 550 560 570 580 590 600 pF1KE2 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KLKCYDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETF 540 550 560 570 580 590 610 620 pF1KE2 EIEMNESDMMLETSMSDHST :::::::::::::::::::: CCDS81 EIEMNESDMMLETSMSDHST 600 610 >>CCDS81787.1 CDC16 gene_id:8881|Hs108|chr13 (526 aa) initn: 3511 init1: 3511 opt: 3511 Z-score: 4113.8 bits: 771.1 E(32554): 0 Smith-Waterman score: 3511; 100.0% identity (100.0% similar) in 526 aa overlap (95-620:1-526) 70 80 90 100 110 120 pF1KE2 LDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSSDWEMS :::::::::::::::::::::::::::::: CCDS81 MEEPINKRLFEKYLKDESGFKDPSSDWEMS 10 20 30 130 140 150 160 170 180 pF1KE2 QSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 QSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKEL 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE2 LESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 LESLPLSKLCNEEQELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYN 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE2 CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 CDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFA 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE2 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLM 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE2 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKW 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE2 FLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 FLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSA 340 350 360 370 380 390 490 500 510 520 530 540 pF1KE2 IGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 IGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIEMYIGDSEAYIGADIKDKLKC 400 410 420 430 440 450 550 560 570 580 590 600 pF1KE2 YDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETFEIEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 YDFDVHTMKTLKNIISPPWDFREFEVEKQTAEETGLTPLETSRKTPDSRPSLEETFEIEM 460 470 480 490 500 510 610 620 pF1KE2 NESDMMLETSMSDHST :::::::::::::::: CCDS81 NESDMMLETSMSDHST 520 620 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 21:20:03 2016 done: Sun Nov 6 21:20:03 2016 Total Scan time: 2.610 Total Display time: 0.030 Function used was FASTA [36.3.4 Apr, 2011]