Result of FASTA (omim) for pFN21AE0278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0278, 211 aa
  1>>>pF1KE0278 211 - 211 aa - 211 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8272+/-0.000262; mu= 12.6898+/- 0.017
 mean_var=91.5968+/-17.988, 0's: 0 Z-trim(122.3): 27  B-trim: 471 in 1/56
 Lambda= 0.134009
 statistics sampled from 40205 (40232) to 40205 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.472), width:  16
 Scan time:  6.420

The best scores are:                                      opt bits E(85289)
XP_011540258 (OMIM: 616793) PREDICTED: group IIF s ( 211) 1544 307.4 1.1e-83
NP_073730 (OMIM: 616793) group IIF secretory phosp ( 211) 1544 307.4 1.1e-83
XP_011540257 (OMIM: 616793) PREDICTED: group IIF s ( 219) 1021 206.3 3.2e-53
NP_036532 (OMIM: 605630) group IID secretory phosp ( 145)  475 100.6 1.4e-21
NP_001155199 (OMIM: 172411) phospholipase A2, memb ( 144)  414 88.8 4.8e-18
NP_001155201 (OMIM: 172411) phospholipase A2, memb ( 144)  414 88.8 4.8e-18
NP_001155200 (OMIM: 172411) phospholipase A2, memb ( 144)  414 88.8 4.8e-18
NP_000291 (OMIM: 172411) phospholipase A2, membran ( 144)  414 88.8 4.8e-18
XP_005245950 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_011539890 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
NP_000920 (OMIM: 228980,601192) calcium-dependent  ( 138)  382 82.6 3.4e-16
XP_011539892 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_011539891 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_011539889 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_011539893 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_011539894 (OMIM: 228980,601192) PREDICTED: calc ( 138)  382 82.6 3.4e-16
XP_005245949 (OMIM: 228980,601192) PREDICTED: calc ( 169)  382 82.7   4e-16
XP_005245948 (OMIM: 228980,601192) PREDICTED: calc ( 169)  382 82.7   4e-16
XP_011539888 (OMIM: 228980,601192) PREDICTED: calc ( 169)  382 82.7   4e-16
NP_003552 (OMIM: 603603) group 10 secretory phosph ( 165)  375 81.3   1e-15
NP_000919 (OMIM: 172410) phospholipase A2 precurso ( 148)  304 67.5 1.2e-11
XP_011521000 (OMIM: 603603) PREDICTED: group 10 se ( 120)  288 64.4   9e-11
XP_011520999 (OMIM: 603603) PREDICTED: group 10 se ( 124)  288 64.4 9.2e-11
XP_011520998 (OMIM: 603603) PREDICTED: group 10 se ( 131)  288 64.4 9.6e-11
XP_011520997 (OMIM: 603603) PREDICTED: group 10 se ( 133)  288 64.4 9.8e-11
NP_001073868 (OMIM: 601658) otoconin-90 precursor  ( 477)  261 59.6 9.9e-09
NP_001258743 (OMIM: 605630) group IID secretory ph (  62)  205 48.1 3.6e-06


>>XP_011540258 (OMIM: 616793) PREDICTED: group IIF secre  (211 aa)
 initn: 1544 init1: 1544 opt: 1544  Z-score: 1623.3  bits: 307.4 E(85289): 1.1e-83
Smith-Waterman score: 1544; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)

               10        20        30        40        50        60
pF1KE0 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
              130       140       150       160       170       180

              190       200       210 
pF1KE0 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
       :::::::::::::::::::::::::::::::
XP_011 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
              190       200       210 

>>NP_073730 (OMIM: 616793) group IIF secretory phospholi  (211 aa)
 initn: 1544 init1: 1544 opt: 1544  Z-score: 1623.3  bits: 307.4 E(85289): 1.1e-83
Smith-Waterman score: 1544; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)

               10        20        30        40        50        60
pF1KE0 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_073 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
              130       140       150       160       170       180

              190       200       210 
pF1KE0 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
       :::::::::::::::::::::::::::::::
NP_073 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
              190       200       210 

>>XP_011540257 (OMIM: 616793) PREDICTED: group IIF secre  (219 aa)
 initn: 1037 init1: 1021 opt: 1021  Z-score: 1076.6  bits: 206.3 E(85289): 3.2e-53
Smith-Waterman score: 1021; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)

               10        20        30        40        50        60
pF1KE0 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
       ::::::::::::::::::::::                                      
XP_011 GCHPYVDHYDHTIENNTEIVCSAPYLPPYLPEPQLRVSSLHGASPTCPKTTEATLRPDST
              130       140       150       160       170       180

>>NP_036532 (OMIM: 605630) group IID secretory phospholi  (145 aa)
 initn: 452 init1: 367 opt: 475  Z-score: 508.6  bits: 100.6 E(85289): 1.4e-21
Smith-Waterman score: 475; 45.4% identity (74.5% similar) in 141 aa overlap (50-188:9-145)

      20        30        40        50        60        70         
pF1KE0 CFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRS
                                     ....:: .    .:..:::. ::. :::. 
NP_036                       MELALLCGLVVMAGVI--PIQGGILNLNKMVKQVTGKM
                                     10          20        30      

      80        90       100       110       120       130         
pF1KE0 AILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEI
        :::.  :::.::::::::::: .::::..:::::..:  :::  : :.: ... .. .:
NP_036 PILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQGCSIYKDYYRYNF-SQGNI
         40        50        60        70        80        90      

     140       150       160         170       180       190       
pF1KE0 VCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEE
        ::: . . :..: : :::....::  .  ::... : .   .:.: ::.:         
NP_036 HCSD-KGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFYWRPHCRGQTPGC         
          100       110       120       130       140              

       200       210 
pF1KE0 VTCSHQSPAPPAPP

>>NP_001155199 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 444.9  bits: 88.8 E(85289): 4.8e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .:..    :  :::.:.:.. :..
NP_001                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
NP_001 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
               40        50        60        70        80          

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
NP_001 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
      90         100       110       120       130       140       

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>NP_001155201 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 444.9  bits: 88.8 E(85289): 4.8e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .:..    :  :::.:.:.. :..
NP_001                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
NP_001 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
               40        50        60        70        80          

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
NP_001 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
      90         100       110       120       130       140       

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>NP_001155200 (OMIM: 172411) phospholipase A2, membrane  (144 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 444.9  bits: 88.8 E(85289): 4.8e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .:..    :  :::.:.:.. :..
NP_001                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
NP_001 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
               40        50        60        70        80          

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
NP_001 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
      90         100       110       120       130       140       

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>NP_000291 (OMIM: 172411) phospholipase A2, membrane as  (144 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 444.9  bits: 88.8 E(85289): 4.8e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .:..    :  :::.:.:.. :..
NP_000                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
NP_000 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
               40        50        60        70        80          

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
NP_000 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
      90         100       110       120       130       140       

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>XP_005245950 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 352 init1: 305 opt: 382  Z-score: 411.7  bits: 82.6 E(85289): 3.4e-16
Smith-Waterman score: 382; 37.9% identity (66.4% similar) in 140 aa overlap (44-181:1-137)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .: . .  . ...:.::.::.:.:
XP_005                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        :::..:. ..  :::::: :::: ::: .:::: ::: :: .: ..::.  .. : . .
XP_005 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
               40        50        60        70        80        90

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLNVYCQGPTPNCSIY
         .. ..:       :  . : ::...: ::    ..:  .:. : :. :          
XP_005 AWGV-VTCEP--GPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS         
                 100       110       120       130                 

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>XP_011539890 (OMIM: 228980,601192) PREDICTED: calcium-  (138 aa)
 initn: 352 init1: 305 opt: 382  Z-score: 411.7  bits: 82.6 E(85289): 3.4e-16
Smith-Waterman score: 382; 37.9% identity (66.4% similar) in 140 aa overlap (44-181:1-137)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .: . .  . ...:.::.::.:.:
XP_011                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        :::..:. ..  :::::: :::: ::: .:::: ::: :: .: ..::.  .. : . .
XP_011 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
               40        50        60        70        80        90

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLNVYCQGPTPNCSIY
         .. ..:       :  . : ::...: ::    ..:  .:. : :. :          
XP_011 AWGV-VTCEP--GPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS         
                 100       110       120       130                 

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP




211 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:55:37 2016 done: Thu Nov  3 17:55:38 2016
 Total Scan time:  6.420 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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