Result of FASTA (ccds) for pFN21AE0278
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE0278, 211 aa
  1>>>pF1KE0278 211 - 211 aa - 211 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.7725+/-0.000598; mu= 13.2084+/- 0.037
 mean_var=94.0298+/-18.149, 0's: 0 Z-trim(115.0): 9  B-trim: 123 in 2/50
 Lambda= 0.132264
 statistics sampled from 15558 (15567) to 15558 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.808), E-opt: 0.2 (0.478), width:  16
 Scan time:  2.280

The best scores are:                                      opt bits E(32554)
CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1         ( 211) 1544 303.5 6.1e-83
CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1         ( 145)  475 99.4 1.2e-21
CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1         ( 142)  422 89.3 1.3e-18
CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1          ( 144)  414 87.8 3.7e-18
CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1           ( 138)  382 81.7 2.5e-16
CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16       ( 165)  375 80.4 7.1e-16
CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12        ( 148)  304 66.8 7.9e-12


>>CCDS204.2 PLA2G2F gene_id:64600|Hs108|chr1              (211 aa)
 initn: 1544 init1: 1544 opt: 1544  Z-score: 1602.5  bits: 303.5 E(32554): 6.1e-83
Smith-Waterman score: 1544; 100.0% identity (100.0% similar) in 211 aa overlap (1-211:1-211)

               10        20        30        40        50        60
pF1KE0 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 MADGAKANPKGFKKKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLST
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE0 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 AHGSLLNLKAMVEAVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE0 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS20 GCHPYVDHYDHTIENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVY
              130       140       150       160       170       180

              190       200       210 
pF1KE0 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
       :::::::::::::::::::::::::::::::
CCDS20 CQGPTPNCSIYEPPPEEVTCSHQSPAPPAPP
              190       200       210 

>>CCDS203.1 PLA2G2D gene_id:26279|Hs108|chr1              (145 aa)
 initn: 452 init1: 367 opt: 475  Z-score: 502.4  bits: 99.4 E(32554): 1.2e-21
Smith-Waterman score: 475; 45.4% identity (74.5% similar) in 141 aa overlap (50-188:9-145)

      20        30        40        50        60        70         
pF1KE0 CFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRS
                                     ....:: .    .:..:::. ::. :::. 
CCDS20                       MELALLCGLVVMAGVI--PIQGGILNLNKMVKQVTGKM
                                     10          20        30      

      80        90       100       110       120       130         
pF1KE0 AILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEI
        :::.  :::.::::::::::: .::::..:::::..:  :::  : :.: ... .. .:
CCDS20 PILSYWPYGCHCGLGGRGQPKDATDWCCQTHDCCYDHLKTQGCSIYKDYYRYNF-SQGNI
         40        50        60        70        80        90      

     140       150       160         170       180       190       
pF1KE0 VCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEE
        ::: . . :..: : :::....::  .  ::... : .   .:.: ::.:         
CCDS20 HCSD-KGSWCEQQLCACDKEVAFCLKRNLDTYQKRLRFYWRPHCRGQTPGC         
          100       110       120       130       140              

       200       210 
pF1KE0 VTCSHQSPAPPAPP

>>CCDS200.1 PLA2G2E gene_id:30814|Hs108|chr1              (142 aa)
 initn: 413 init1: 242 opt: 422  Z-score: 447.8  bits: 89.3 E(32554): 1.3e-18
Smith-Waterman score: 422; 43.8% identity (69.5% similar) in 128 aa overlap (63-188:19-142)

             40        50        60        70        80        90  
pF1KE0 CPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILSFVGYGCYCG
                                     :.:... .:.: .::.:: :..  ::::::
CCDS20             MKSPHVLVFLCLLVALVTGNLVQFGVMIEKMTGKSA-LQYNDYGCYCG
                           10        20        30         40       

            100       110       120       130       140       150  
pF1KE0 LGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSDLNKTECDKQ
       .::   : :..::::::::::: .:   ::.: ...:  .. ..  : :.  ..: :.. 
CCDS20 IGGSHWPVDQTDWCCHAHDCCYGRLEKLGCEPKLEKYLFSV-SERGIFCA--GRTTCQRL
        50        60        70        80         90         100    

            160         170       180       190       200       210
pF1KE0 TCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIYEPPPEEVTCSHQSPAPPAP
       :: :::  .::.  .  :: ..:  . :  : :::: :                      
CCDS20 TCECDKRAALCFRRNLGTYNRKYAHYPNKLCTGPTPPC                      
          110       120       130       140                        

        
pF1KE0 P

>>CCDS201.1 PLA2G2A gene_id:5320|Hs108|chr1               (144 aa)
 initn: 349 init1: 296 opt: 414  Z-score: 439.5  bits: 87.8 E(32554): 3.7e-18
Smith-Waterman score: 414; 38.8% identity (67.3% similar) in 147 aa overlap (44-188:1-144)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .:..    :  :::.:.:.. :..
CCDS20                               MKTLLLLAVIMIFGLLQAHGNLVNFHRMIK
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        .::. : ::.  :::.::.::::.::: .: :: .:::::..:  .::      :  . 
CCDS20 LTTGKEAALSYGFYGCHCGVGGRGSPKDATDRCCVTHDCCYKRLEKRGCGTKFLSYKFS-
               40        50        60        70        80          

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQ--TYREEYRGFLNVYCQGPTPNCSIY
       .....:.:.  ..  : .: : :::  . :.  .  :: ..:. . : .:.: :: :   
CCDS20 NSGSRITCA--KQDSCRSQLCECDKAAATCFARNKTTYNKKYQYYSNKHCRGSTPRC   
      90         100       110       120       130       140       

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>CCDS202.1 PLA2G5 gene_id:5322|Hs108|chr1                (138 aa)
 initn: 352 init1: 305 opt: 382  Z-score: 406.7  bits: 81.7 E(32554): 2.5e-16
Smith-Waterman score: 382; 37.9% identity (66.4% similar) in 140 aa overlap (44-181:1-137)

            20        30        40        50        60        70   
pF1KE0 KKVLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVE
                                     :: .. .: . .  . ...:.::.::.:.:
CCDS20                               MKGLLPLAWFLACSVPAVQGGLLDLKSMIE
                                             10        20        30

            80        90       100       110       120       130   
pF1KE0 AVTGRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTI
        :::..:. ..  :::::: :::: ::: .:::: ::: :: .: ..::.  .. : . .
CCDS20 KVTGKNALTNYGFYGCYCGWGGRGTPKDGTDWCCWAHDHCYGRLEEKGCNIRTQSYKYRF
               40        50        60        70        80        90

           140       150       160         170       180       190 
pF1KE0 ENNTEIVCSDLNKTECDKQTCMCDKNMVLCLMN--QTYREEYRGFLNVYCQGPTPNCSIY
         .. ..:       :  . : ::...: ::    ..:  .:. : :. :          
CCDS20 AWGV-VTCEP--GPFCHVNLCACDRKLVYCLKRNLRSYNPQYQYFPNILCS         
                 100       110       120       130                 

             200       210 
pF1KE0 EPPPEEVTCSHQSPAPPAPP

>>CCDS10555.1 PLA2G10 gene_id:8399|Hs108|chr16            (165 aa)
 initn: 310 init1: 261 opt: 375  Z-score: 398.5  bits: 80.4 E(32554): 7.1e-16
Smith-Waterman score: 375; 34.8% identity (67.4% similar) in 135 aa overlap (54-188:33-164)

            30        40        50        60        70        80   
pF1KE0 WRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHGSLLNLKAMVEAVTGRSAILS
                                     :. .: . . ..:.: . :  :  :. : .
CCDS10 PLPVCLPIMLLLLLPSLLLLLLLPGPGSGEASRILRVHRRGILELAGTVGCVGPRTPI-A
             10        20        30        40        50        60  

            90       100       110       120       130       140   
pF1KE0 FVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQELFDQGCHPYVDHYDHTIENNTEIVCSD
       .. :::.:::::.:::.: .:::::.::::: .  . :: : ...:.    :.. ..:. 
CCDS10 YMKYGCFCGLGGHGQPRDAIDWCCHGHDCCYTRAEEAGCSPKTERYSWQCVNQS-VLCGP
              70        80        90       100       110        120

           150       160       170       180       190       200   
pF1KE0 LNKTECDKQTCMCDKNMVLCLMNQTYREEYRGFLNVYCQGPTPNCSIYEPPPEEVTCSHQ
         ...:..  : ::.... :: .  :  .:  . .  :.  .:.:               
CCDS10 -AENKCQELLCKCDQEIANCLAQTEYNLKYLFYPQFLCEPDSPKCD              
               130       140       150       160                   

           210 
pF1KE0 SPAPPAPP

>>CCDS9195.1 PLA2G1B gene_id:5319|Hs108|chr12             (148 aa)
 initn: 290 init1: 178 opt: 304  Z-score: 325.9  bits: 66.8 E(32554): 7.9e-12
Smith-Waterman score: 304; 34.2% identity (65.1% similar) in 149 aa overlap (46-182:2-147)

          20        30        40        50        60            70 
pF1KE0 VLDRCFSGWRGPRFGASCPSRTSRSSLGMKKFFTVAILAGSVLSTAHG----SLLNLKAM
                                     :....:.:  .: ..  :    .. ... :
CCDS91                              MKLLVLAVLL-TVAAADSGISPRAVWQFRKM
                                            10         20        30

               80        90       100       110         120        
pF1KE0 VEAVT-GRSAILSFVGYGCYCGLGGRGQPKDEVDWCCHAHDCCYQEL--FDQGCHPYVDH
       .. :  : . .: . .::::::::: : : ::.: ::..:: ::..   .:. :.  .:.
CCDS91 IKCVIPGSDPFLEYNNYGCYCGLGGSGTPVDELDKCCQTHDNCYDQAKKLDS-CKFLLDN
               40        50        60        70        80          

       130          140       150       160       170        180   
pF1KE0 -YDHTIE---NNTEIVCSDLNKTECDKQTCMCDKNMVLCLMNQTYREEYRGF-LNVYCQG
        : ::     ... :.::. :: ::.   : ::.: ..:. .  : . ....  . ::: 
CCDS91 PYTHTYSYSCSGSAITCSSKNK-ECEAFICNCDRNAAICFSKAPYNKAHKNLDTKKYCQS
      90       100       110        120       130       140        

           190       200       210 
pF1KE0 PTPNCSIYEPPPEEVTCSHQSPAPPAPP




211 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 17:55:36 2016 done: Thu Nov  3 17:55:37 2016
 Total Scan time:  2.280 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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