Result of FASTA (omim) for pFN21AB6361
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6361, 169 aa
  1>>>pF1KB6361 169 - 169 aa - 169 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.9302+/-0.000272; mu= 1.1196+/- 0.017
 mean_var=145.7888+/-28.991, 0's: 0 Z-trim(123.4): 28  B-trim: 0 in 0/56
 Lambda= 0.106221
 statistics sampled from 43247 (43275) to 43247 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.507), width:  16
 Scan time:  6.480

The best scores are:                                      opt bits E(85289)
XP_011517778 (OMIM: 601070) PREDICTED: interleukin ( 204) 1096 178.2 6.6e-45
NP_001230468 (OMIM: 601070) interleukin-15 recepto ( 231)  915 150.5 1.7e-36
XP_016871687 (OMIM: 601070) PREDICTED: interleukin ( 260)  915 150.5 1.8e-36
NP_002180 (OMIM: 601070) interleukin-15 receptor s ( 267)  915 150.5 1.9e-36
XP_016871684 (OMIM: 601070) PREDICTED: interleukin ( 325)  915 150.6 2.2e-36
NP_001243694 (OMIM: 601070) interleukin-15 recepto ( 353)  915 150.6 2.4e-36
XP_011517767 (OMIM: 601070) PREDICTED: interleukin ( 376)  915 150.6 2.5e-36
XP_016871692 (OMIM: 601070) PREDICTED: interleukin ( 198)  898 147.9 8.8e-36
NP_751950 (OMIM: 601070) interleukin-15 receptor s ( 234)  898 147.9   1e-35
XP_011517771 (OMIM: 601070) PREDICTED: interleukin ( 343)  898 148.0 1.4e-35
XP_011517779 (OMIM: 601070) PREDICTED: interleukin ( 189)  850 140.5 1.4e-33
XP_011517777 (OMIM: 601070) PREDICTED: interleukin ( 262)  847 140.1 2.5e-33
XP_016871691 (OMIM: 601070) PREDICTED: interleukin ( 216)  669 112.8 3.5e-25
XP_011517768 (OMIM: 601070) PREDICTED: interleukin ( 361)  669 112.9 5.4e-25
XP_016871685 (OMIM: 601070) PREDICTED: interleukin ( 289)  666 112.4 6.1e-25
XP_016871686 (OMIM: 601070) PREDICTED: interleukin ( 289)  666 112.4 6.1e-25
XP_011517774 (OMIM: 601070) PREDICTED: interleukin ( 295)  666 112.4 6.2e-25
XP_011517773 (OMIM: 601070) PREDICTED: interleukin ( 318)  666 112.4 6.6e-25
XP_011517769 (OMIM: 601070) PREDICTED: interleukin ( 360)  666 112.4 7.4e-25
XP_011517766 (OMIM: 601070) PREDICTED: interleukin ( 383)  666 112.5 7.8e-25
XP_011517764 (OMIM: 601070) PREDICTED: interleukin ( 411)  666 112.5 8.2e-25
XP_011517763 (OMIM: 601070) PREDICTED: interleukin ( 434)  666 112.5 8.6e-25
XP_011517770 (OMIM: 601070) PREDICTED: interleukin ( 348)  661 111.7 1.2e-24
XP_011517776 (OMIM: 601070) PREDICTED: interleukin ( 285)  655 110.7 1.9e-24
XP_016871690 (OMIM: 601070) PREDICTED: interleukin ( 277)  652 110.2 2.6e-24
XP_016871689 (OMIM: 601070) PREDICTED: interleukin ( 256)  649 109.8 3.4e-24
XP_011517772 (OMIM: 601070) PREDICTED: interleukin ( 327)  649 109.8 4.1e-24
XP_011517765 (OMIM: 601070) PREDICTED: interleukin ( 401)  649 109.9 4.9e-24


>>XP_011517778 (OMIM: 601070) PREDICTED: interleukin-15   (204 aa)
 initn: 1096 init1: 1096 opt: 1096  Z-score: 927.1  bits: 178.2 E(85289): 6.6e-45
Smith-Waterman score: 1096; 99.4% identity (100.0% similar) in 169 aa overlap (1-169:36-204)

                                             10        20        30
pF1KB6                               MAPRRARGCRTLGLPALLLLLLLRPPATRE
                                     ::::::::::::::::::::::::::::::
XP_011 RQVPEQRSPPPPGLGSARPGSPAVSCGAAAMAPRRARGCRTLGLPALLLLLLLRPPATRE
          10        20        30        40        50        60     

               40        50        60        70        80        90
pF1KB6 PAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKTWELTAS
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::
XP_011 PAASSPSSNNTAATTAAIVPGSQLMPSKSPSTGTTEISSHESSHGTPSQTTAKNWELTAS
          70        80        90       100       110       120     

              100       110       120       130       140       150
pF1KB6 ASHQPPGVYPQGHSDTTVAISTSTVLLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ASHQPPGVYPQGHSDTTVAISTSTVLLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALP
         130       140       150       160       170       180     

              160         
pF1KB6 VTWGTSSRDEDLENCSHHL
       :::::::::::::::::::
XP_011 VTWGTSSRDEDLENCSHHL
         190       200    

>>NP_001230468 (OMIM: 601070) interleukin-15 receptor su  (231 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 776.4  bits: 150.5 E(85289): 1.7e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:88-231)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
NP_001 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
        60        70        80        90       100       110       

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
       120       130       140       150       160       170       

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       180       190       200       210       220       230 

>>XP_016871687 (OMIM: 601070) PREDICTED: interleukin-15   (260 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 775.6  bits: 150.5 E(85289): 1.8e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:117-260)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
XP_016 VGDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
         90       100       110       120       130       140      

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
        150       160       170       180       190       200      

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
        210       220       230       240       250       260

>>NP_002180 (OMIM: 601070) interleukin-15 receptor subun  (267 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 775.5  bits: 150.5 E(85289): 1.9e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:124-267)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
NP_002 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
           100       110       120       130       140       150   

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_002 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
           160       170       180       190       200       210   

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
           220       230       240       250       260       

>>XP_016871684 (OMIM: 601070) PREDICTED: interleukin-15   (325 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 774.2  bits: 150.6 E(85289): 2.2e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:182-325)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
XP_016 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
             160       170       180       190       200       210 

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_016 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
             220       230       240       250       260       270 

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
             280       290       300       310       320     

>>NP_001243694 (OMIM: 601070) interleukin-15 receptor su  (353 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 773.6  bits: 150.6 E(85289): 2.4e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:210-353)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
NP_001 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
     180       190       200       210       220       230         

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
NP_001 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
     240       250       260       270       280       290         

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
     300       310       320       330       340       350   

>>XP_011517767 (OMIM: 601070) PREDICTED: interleukin-15   (376 aa)
 initn: 915 init1: 915 opt: 915  Z-score: 773.2  bits: 150.6 E(85289): 2.5e-36
Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:233-376)

                    10        20        30        40        50     
pF1KB6      MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM
                                     :. .::::::::::::::::::::::::::
XP_011 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM
            210       220       230       240       250       260  

          60        70        80        90       100       110     
pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV
       ::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::
XP_011 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV
            270       280       290       300       310       320  

         120       130       140       150       160         
pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
            330       340       350       360       370      

>>XP_016871692 (OMIM: 601070) PREDICTED: interleukin-15   (198 aa)
 initn: 898 init1: 898 opt: 898  Z-score: 763.4  bits: 147.9 E(85289): 8.8e-36
Smith-Waterman score: 898; 98.6% identity (100.0% similar) in 140 aa overlap (30-169:59-198)

                10        20        30        40        50         
pF1KB6  MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLMPSKS
                                     .:::::::::::::::::::::::::::::
XP_016 RKAGTSSLTECVLNKATNVAHWTTPSLKCIKPAASSPSSNNTAATTAAIVPGSQLMPSKS
       30        40        50        60        70        80        

      60        70        80        90       100       110         
pF1KB6 PSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
       ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_016 PSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
       90       100       110       120       130       140        

     120       130       140       150       160         
pF1KB6 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
      150       160       170       180       190        

>>NP_751950 (OMIM: 601070) interleukin-15 receptor subun  (234 aa)
 initn: 1077 init1: 898 opt: 898  Z-score: 762.3  bits: 147.9 E(85289): 1e-35
Smith-Waterman score: 898; 98.6% identity (100.0% similar) in 140 aa overlap (30-169:95-234)

                10        20        30        40        50         
pF1KB6  MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLMPSKS
                                     .:::::::::::::::::::::::::::::
NP_751 RKAGTSSLTECVLNKATNVAHWTTPSLKCIKPAASSPSSNNTAATTAAIVPGSQLMPSKS
           70        80        90       100       110       120    

      60        70        80        90       100       110         
pF1KB6 PSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
       ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
NP_751 PSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
          130       140       150       160       170       180    

     120       130       140       150       160         
pF1KB6 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_751 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
          190       200       210       220       230    

>>XP_011517771 (OMIM: 601070) PREDICTED: interleukin-15   (343 aa)
 initn: 898 init1: 898 opt: 898  Z-score: 759.7  bits: 148.0 E(85289): 1.4e-35
Smith-Waterman score: 898; 98.6% identity (100.0% similar) in 140 aa overlap (30-169:204-343)

                10        20        30        40        50         
pF1KB6  MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLMPSKS
                                     .:::::::::::::::::::::::::::::
XP_011 RKAGTSSLTECVLNKATNVAHWTTPSLKCIKPAASSPSSNNTAATTAAIVPGSQLMPSKS
           180       190       200       210       220       230   

      60        70        80        90       100       110         
pF1KB6 PSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
       ::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::::
XP_011 PSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG
           240       250       260       270       280       290   

     120       130       140       150       160         
pF1KB6 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL
           300       310       320       330       340   




169 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 22:00:27 2016 done: Sun Nov  6 22:00:28 2016
 Total Scan time:  6.480 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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