FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6361, 169 aa 1>>>pF1KB6361 169 - 169 aa - 169 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.7367+/-0.000659; mu= 1.9880+/- 0.040 mean_var=136.0400+/-26.980, 0's: 0 Z-trim(115.9): 4 B-trim: 7 in 1/50 Lambda= 0.109962 statistics sampled from 16442 (16446) to 16442 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.82), E-opt: 0.2 (0.505), width: 16 Scan time: 2.280 The best scores are: opt bits E(32554) CCDS58069.1 IL15RA gene_id:3601|Hs108|chr10 ( 231) 915 155.2 2.4e-38 CCDS7074.1 IL15RA gene_id:3601|Hs108|chr10 ( 267) 915 155.3 2.7e-38 CCDS73065.1 IL15RA gene_id:3601|Hs108|chr10 ( 353) 915 155.3 3.4e-38 CCDS7075.2 IL15RA gene_id:3601|Hs108|chr10 ( 234) 898 152.5 1.6e-37 >>CCDS58069.1 IL15RA gene_id:3601|Hs108|chr10 (231 aa) initn: 915 init1: 915 opt: 915 Z-score: 802.0 bits: 155.2 E(32554): 2.4e-38 Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:88-231) 10 20 30 40 50 pF1KB6 MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM :. .:::::::::::::::::::::::::: CCDS58 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM 60 70 80 90 100 110 60 70 80 90 100 110 pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS58 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV 120 130 140 150 160 170 120 130 140 150 160 pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL 180 190 200 210 220 230 >>CCDS7074.1 IL15RA gene_id:3601|Hs108|chr10 (267 aa) initn: 915 init1: 915 opt: 915 Z-score: 801.0 bits: 155.3 E(32554): 2.7e-38 Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:124-267) 10 20 30 40 50 pF1KB6 MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM :. .:::::::::::::::::::::::::: CCDS70 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM 100 110 120 130 140 150 60 70 80 90 100 110 pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS70 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV 160 170 180 190 200 210 120 130 140 150 160 pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL 220 230 240 250 260 >>CCDS73065.1 IL15RA gene_id:3601|Hs108|chr10 (353 aa) initn: 915 init1: 915 opt: 915 Z-score: 799.2 bits: 155.3 E(32554): 3.4e-38 Smith-Waterman score: 915; 97.2% identity (99.3% similar) in 144 aa overlap (26-169:210-353) 10 20 30 40 50 pF1KB6 MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLM :. .:::::::::::::::::::::::::: CCDS73 IRDPALVHQRPAPPSTVTTAGVTPQPESLSPSGKEPAASSPSSNNTAATTAAIVPGSQLM 180 190 200 210 220 230 60 70 80 90 100 110 pF1KB6 PSKSPSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTV ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS73 PSKSPSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTV 240 250 260 270 280 290 120 130 140 150 160 pF1KB6 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS73 LLCGLSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL 300 310 320 330 340 350 >>CCDS7075.2 IL15RA gene_id:3601|Hs108|chr10 (234 aa) initn: 1077 init1: 898 opt: 898 Z-score: 787.3 bits: 152.5 E(32554): 1.6e-37 Smith-Waterman score: 898; 98.6% identity (100.0% similar) in 140 aa overlap (30-169:95-234) 10 20 30 40 50 pF1KB6 MAPRRARGCRTLGLPALLLLLLLRPPATREPAASSPSSNNTAATTAAIVPGSQLMPSKS .::::::::::::::::::::::::::::: CCDS70 RKAGTSSLTECVLNKATNVAHWTTPSLKCIKPAASSPSSNNTAATTAAIVPGSQLMPSKS 70 80 90 100 110 120 60 70 80 90 100 110 pF1KB6 PSTGTTEISSHESSHGTPSQTTAKTWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: CCDS70 PSTGTTEISSHESSHGTPSQTTAKNWELTASASHQPPGVYPQGHSDTTVAISTSTVLLCG 130 140 150 160 170 180 120 130 140 150 160 pF1KB6 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS70 LSAVSLLACYLKSRQTPPLASVEMEAMEALPVTWGTSSRDEDLENCSHHL 190 200 210 220 230 169 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:00:27 2016 done: Sun Nov 6 22:00:27 2016 Total Scan time: 2.280 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]