FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5305, 521 aa 1>>>pF1KB5305 521 - 521 aa - 521 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4344+/-0.0005; mu= 13.4863+/- 0.031 mean_var=178.6747+/-39.390, 0's: 0 Z-trim(112.9): 482 B-trim: 791 in 2/50 Lambda= 0.095950 statistics sampled from 21351 (21965) to 21351 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.258), width: 16 Scan time: 8.550 The best scores are: opt bits E(85289) NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521) 3546 504.3 3.7e-142 NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522) 3534 502.6 1.2e-141 NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 1918 278.6 1.7e-74 NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 1918 278.6 1.7e-74 XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 441 74.2 6.8e-13 NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 441 74.2 6.8e-13 NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 441 74.2 6.8e-13 NP_067642 (OMIM: 610863,615185) guanine nucleotide ( 340) 421 71.4 4.7e-12 XP_006713784 (OMIM: 610863,615185) PREDICTED: guan ( 340) 421 71.4 4.7e-12 XP_005247749 (OMIM: 610863,615185) PREDICTED: guan ( 340) 421 71.4 4.7e-12 NP_005264 (OMIM: 139390) guanine nucleotide-bindin ( 340) 418 71.0 6.3e-12 XP_016856549 (OMIM: 139380,613065,616973) PREDICTE ( 340) 417 70.9 6.9e-12 XP_016856548 (OMIM: 139380,613065,616973) PREDICTE ( 340) 417 70.9 6.9e-12 NP_002065 (OMIM: 139380,613065,616973) guanine nuc ( 340) 417 70.9 6.9e-12 NP_001269468 (OMIM: 139380,613065,616973) guanine ( 340) 417 70.9 6.9e-12 XP_016856550 (OMIM: 139380,613065,616973) PREDICTE ( 340) 417 70.9 6.9e-12 XP_016878353 (OMIM: 602703,616212) PREDICTED: kata ( 655) 413 70.7 1.5e-11 XP_016878352 (OMIM: 602703,616212) PREDICTED: kata ( 655) 413 70.7 1.5e-11 NP_005877 (OMIM: 602703,616212) katanin p80 WD40 r ( 655) 413 70.7 1.5e-11 XP_006721186 (OMIM: 602703,616212) PREDICTED: kata ( 658) 413 70.7 1.5e-11 XP_016878351 (OMIM: 602703,616212) PREDICTED: kata ( 672) 413 70.7 1.5e-11 XP_016878350 (OMIM: 602703,616212) PREDICTED: kata ( 672) 413 70.7 1.5e-11 XP_005255829 (OMIM: 602703,616212) PREDICTED: kata ( 672) 413 70.7 1.5e-11 XP_016878349 (OMIM: 602703,616212) PREDICTED: kata ( 675) 413 70.7 1.5e-11 XP_006721185 (OMIM: 602703,616212) PREDICTED: kata ( 675) 413 70.7 1.5e-11 XP_011521112 (OMIM: 602703,616212) PREDICTED: kata ( 675) 413 70.7 1.5e-11 XP_006721184 (OMIM: 602703,616212) PREDICTED: kata ( 675) 413 70.7 1.5e-11 NP_055317 (OMIM: 608330) pre-mRNA-processing facto ( 504) 405 69.4 2.8e-11 NP_002066 (OMIM: 139130,145500,617024) guanine nuc ( 340) 395 67.8 5.7e-11 NP_001284500 (OMIM: 139130,145500,617024) guanine ( 339) 388 66.9 1.1e-10 NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 387 66.8 1.3e-10 NP_001188493 (OMIM: 605961) pleiotropic regulator ( 505) 388 67.1 1.4e-10 NP_002660 (OMIM: 605961) pleiotropic regulator 1 i ( 514) 388 67.1 1.4e-10 NP_006569 (OMIM: 604447) guanine nucleotide-bindin ( 353) 384 66.3 1.7e-10 NP_001269467 (OMIM: 139380,613065,616973) guanine ( 240) 381 65.7 1.8e-10 NP_057278 (OMIM: 604447) guanine nucleotide-bindin ( 395) 384 66.4 1.8e-10 XP_011519464 (OMIM: 604447) PREDICTED: guanine nuc ( 353) 381 65.9 2.2e-10 XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321) 374 64.9 4.1e-10 XP_011519465 (OMIM: 604447) PREDICTED: guanine nuc ( 301) 373 64.7 4.4e-10 NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369) 374 65.0 4.5e-10 NP_008882 (OMIM: 601787) transcription initiation ( 800) 377 65.8 5.4e-10 XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 369 64.2 6.4e-10 XP_016860391 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 369 64.2 6.7e-10 XP_011510137 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 369 64.2 6.7e-10 XP_016860389 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 369 64.2 6.7e-10 XP_016860390 (OMIM: 612173) PREDICTED: sperm-assoc ( 323) 369 64.2 6.7e-10 XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 369 64.2 6.7e-10 NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 369 64.3 7.1e-10 XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 369 64.3 7.3e-10 XP_016860387 (OMIM: 612173) PREDICTED: sperm-assoc ( 390) 369 64.3 7.5e-10 >>NP_001231855 (OMIM: 607795,615922) U4/U6 small nuclear (521 aa) initn: 3546 init1: 3546 opt: 3546 Z-score: 2673.2 bits: 504.3 E(85289): 3.7e-142 Smith-Waterman score: 3546; 100.0% identity (100.0% similar) in 521 aa overlap (1-521:1-521) 10 20 30 40 50 60 pF1KB5 MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MASSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGIE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG 430 440 450 460 470 480 490 500 510 520 pF1KB5 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE ::::::::::::::::::::::::::::::::::::::::: NP_001 WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 490 500 510 520 >>NP_004688 (OMIM: 607795,615922) U4/U6 small nuclear ri (522 aa) initn: 3507 init1: 3507 opt: 3534 Z-score: 2664.2 bits: 502.6 E(85289): 1.2e-141 Smith-Waterman score: 3534; 99.8% identity (99.8% similar) in 522 aa overlap (1-521:1-522) 10 20 30 40 50 pF1KB5 MASSRASST-ATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGI ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MASSRASSTQATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKDGLKAGI 10 20 30 40 50 60 60 70 80 90 100 110 pF1KB5 EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 EAGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPIT 70 80 90 100 110 120 120 130 140 150 160 170 pF1KB5 LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LFGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLW 130 140 150 160 170 180 180 190 200 210 220 230 pF1KB5 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 190 200 210 220 230 240 240 250 260 270 280 290 pF1KB5 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 250 260 270 280 290 300 300 310 320 330 340 350 pF1KB5 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 310 320 330 340 350 360 360 370 380 390 400 410 pF1KB5 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 370 380 390 400 410 420 420 430 440 450 460 470 pF1KB5 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 430 440 450 460 470 480 480 490 500 510 520 pF1KB5 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE :::::::::::::::::::::::::::::::::::::::::: NP_004 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE 490 500 510 520 >>NP_001309195 (OMIM: 607795,615922) U4/U6 small nuclear (279 aa) initn: 1918 init1: 1918 opt: 1918 Z-score: 1458.3 bits: 278.6 E(85289): 1.7e-74 Smith-Waterman score: 1918; 100.0% identity (100.0% similar) in 271 aa overlap (251-521:9-279) 230 240 250 260 270 280 pF1KB5 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF :::::::::::::::::::::::::::::: NP_001 MLSFVFDRSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 10 20 30 290 300 310 320 330 340 pF1KB5 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 40 50 60 70 80 90 350 360 370 380 390 400 pF1KB5 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 100 110 120 130 140 150 410 420 430 440 450 460 pF1KB5 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIH 160 170 180 190 200 210 470 480 490 500 510 520 pF1KB5 GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMA 220 230 240 250 260 270 pF1KB5 E : NP_001 E >>NP_001309196 (OMIM: 607795,615922) U4/U6 small nuclear (279 aa) initn: 1918 init1: 1918 opt: 1918 Z-score: 1458.3 bits: 278.6 E(85289): 1.7e-74 Smith-Waterman score: 1918; 100.0% identity (100.0% similar) in 271 aa overlap (251-521:9-279) 230 240 250 260 270 280 pF1KB5 NNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF :::::::::::::::::::::::::::::: NP_001 MLSFVFDRSGLCKLWSVPDCNLLHTLRGHNTNVGAIVF 10 20 30 290 300 310 320 330 340 pF1KB5 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTT 40 50 60 70 80 90 350 360 370 380 390 400 pF1KB5 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM 100 110 120 130 140 150 410 420 430 440 450 460 pF1KB5 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIH 160 170 180 190 200 210 470 480 490 500 510 520 pF1KB5 GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMA 220 230 240 250 260 270 pF1KB5 E : NP_001 E >>XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-conta (334 aa) initn: 376 init1: 376 opt: 441 Z-score: 352.4 bits: 74.2 E(85289): 6.8e-13 Smith-Waterman score: 449; 26.1% identity (60.6% similar) in 284 aa overlap (228-508:43-318) 200 210 220 230 240 250 pF1KB5 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW : . .: .::::.. ::.. . : :.: XP_005 ARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 20 30 40 50 60 70 260 270 280 290 300 310 pF1KB5 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD .. : .. .:. ::. ... ... :.. :.: . : ..:.:...: . . XP_005 GAYDGKFEKTISGHKLGISDVAWSSDSNL--------LVSASDDKTLKIWDVSSGKCLKT 80 90 100 110 120 320 330 340 350 360 370 pF1KB5 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS ..::. : ..:.. .. . .:.: :.::... . . .:: : . :..::: XP_005 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 130 140 150 160 170 180 380 390 400 410 420 430 pF1KB5 LAGTGGLDAFGRVWDLRTGRCI-MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR : ... :.. :.:: .:.:. ... . ..::::: .: ... ::: :.:: XP_005 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 190 200 210 220 230 240 440 450 460 470 480 490 pF1KB5 QRRCVYTIPAHQNLVTGV--KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKV . .:. : .:.: . .: :.....:. :: . ::. .. : :: : XP_005 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 250 260 270 280 290 300 500 510 520 pF1KB5 MGLDISSDGQLIATCSYDRTFKLWMAE .. ..::. XP_005 ISTACHPTENIIASAALENDKTIKLWKSDC 310 320 330 >>NP_060058 (OMIM: 609012) WD repeat-containing protein (334 aa) initn: 376 init1: 376 opt: 441 Z-score: 352.4 bits: 74.2 E(85289): 6.8e-13 Smith-Waterman score: 449; 26.1% identity (60.6% similar) in 284 aa overlap (228-508:43-318) 200 210 220 230 240 250 pF1KB5 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW : . .: .::::.. ::.. . : :.: NP_060 ARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 20 30 40 50 60 70 260 270 280 290 300 310 pF1KB5 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD .. : .. .:. ::. ... ... :.. :.: . : ..:.:...: . . NP_060 GAYDGKFEKTISGHKLGISDVAWSSDSNL--------LVSASDDKTLKIWDVSSGKCLKT 80 90 100 110 120 320 330 340 350 360 370 pF1KB5 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS ..::. : ..:.. .. . .:.: :.::... . . .:: : . :..::: NP_060 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 130 140 150 160 170 180 380 390 400 410 420 430 pF1KB5 LAGTGGLDAFGRVWDLRTGRCI-MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR : ... :.. :.:: .:.:. ... . ..::::: .: ... ::: :.:: NP_060 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 190 200 210 220 230 240 440 450 460 470 480 490 pF1KB5 QRRCVYTIPAHQNLVTGV--KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKV . .:. : .:.: . .: :.....:. :: . ::. .. : :: : NP_060 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 250 260 270 280 290 300 500 510 520 pF1KB5 MGLDISSDGQLIATCSYDRTFKLWMAE .. ..::. NP_060 ISTACHPTENIIASAALENDKTIKLWKSDC 310 320 330 >>NP_438172 (OMIM: 609012) WD repeat-containing protein (334 aa) initn: 376 init1: 376 opt: 441 Z-score: 352.4 bits: 74.2 E(85289): 6.8e-13 Smith-Waterman score: 449; 26.1% identity (60.6% similar) in 284 aa overlap (228-508:43-318) 200 210 220 230 240 250 pF1KB5 HKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLW : . .: .::::.. ::.. . : :.: NP_438 ARAQPTPSSSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 20 30 40 50 60 70 260 270 280 290 300 310 pF1KB5 SVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAADGSVKLWSLDSDEPVAD .. : .. .:. ::. ... ... :.. :.: . : ..:.:...: . . NP_438 GAYDGKFEKTISGHKLGISDVAWSSDSNL--------LVSASDDKTLKIWDVSSGKCLKT 80 90 100 110 120 320 330 340 350 360 370 pF1KB5 IEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGS ..::. : ..:.. .. . .:.: :.::... . . .:: : . :..::: NP_438 LKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 130 140 150 160 170 180 380 390 400 410 420 430 pF1KB5 LAGTGGLDAFGRVWDLRTGRCI-MFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLR : ... :.. :.:: .:.:. ... . ..::::: .: ... ::: :.:: NP_438 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 190 200 210 220 230 240 440 450 460 470 480 490 pF1KB5 QRRCVYTIPAHQNLVTGV--KFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKV . .:. : .:.: . .: :.....:. :: . ::. .. : :: : NP_438 KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVV 250 260 270 280 290 300 500 510 520 pF1KB5 MGLDISSDGQLIATCSYDRTFKLWMAE .. ..::. NP_438 ISTACHPTENIIASAALENDKTIKLWKSDC 310 320 330 >>NP_067642 (OMIM: 610863,615185) guanine nucleotide-bin (340 aa) initn: 423 init1: 254 opt: 421 Z-score: 337.4 bits: 71.4 E(85289): 4.7e-12 Smith-Waterman score: 422; 28.1% identity (59.3% similar) in 295 aa overlap (237-518:62-339) 210 220 230 240 250 260 pF1KB5 TSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLH :.. .:..:..: .: .:. : .: NP_067 QITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMH 40 50 60 70 80 90 270 280 290 300 310 320 pF1KB5 TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRV .. ... : . .. :.. : ..:.. :. ....: . : :. ::: NP_067 AIPLRSSWVMTCAYAPSG---------NYVACGGLDNICSIYNLKTRE------GN-VRV 100 110 120 130 330 340 350 360 370 pF1KB5 ARVMWHPSG-----RFLG-----TTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQD .: . .: ::: :. : . :::.:. .. ::: :..... : NP_067 SRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 140 150 160 170 180 190 380 390 400 410 420 430 pF1KB5 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL .:. :: ...::.: : : . . ::...: ...: :::: .:::: : ::...:: NP_067 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL 200 210 220 230 240 250 440 450 460 470 480 490 pF1KB5 RQRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK : . . . .:.:.. :. . : .::.: : . ..: . .::::... NP_067 RADQELL-LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNR 260 270 280 290 300 310 500 510 520 pF1KB5 VMGLDISSDGQLIATCSYDRTFKLWMAE : : ...::. .:: :.: ...: NP_067 VSCLGVTDDGMAVATGSWDSFLRIWN 320 330 340 >>XP_006713784 (OMIM: 610863,615185) PREDICTED: guanine (340 aa) initn: 423 init1: 254 opt: 421 Z-score: 337.4 bits: 71.4 E(85289): 4.7e-12 Smith-Waterman score: 422; 28.1% identity (59.3% similar) in 295 aa overlap (237-518:62-339) 210 220 230 240 250 260 pF1KB5 TSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLH :.. .:..:..: .: .:. : .: XP_006 QITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMH 40 50 60 70 80 90 270 280 290 300 310 320 pF1KB5 TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRV .. ... : . .. :.. : ..:.. :. ....: . : :. ::: XP_006 AIPLRSSWVMTCAYAPSG---------NYVACGGLDNICSIYNLKTRE------GN-VRV 100 110 120 130 330 340 350 360 370 pF1KB5 ARVMWHPSG-----RFLG-----TTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQD .: . .: ::: :. : . :::.:. .. ::: :..... : XP_006 SRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 140 150 160 170 180 190 380 390 400 410 420 430 pF1KB5 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL .:. :: ...::.: : : . . ::...: ...: :::: .:::: : ::...:: XP_006 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL 200 210 220 230 240 250 440 450 460 470 480 490 pF1KB5 RQRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK : . . . .:.:.. :. . : .::.: : . ..: . .::::... XP_006 RADQELL-LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNR 260 270 280 290 300 310 500 510 520 pF1KB5 VMGLDISSDGQLIATCSYDRTFKLWMAE : : ...::. .:: :.: ...: XP_006 VSCLGVTDDGMAVATGSWDSFLRIWN 320 330 340 >>XP_005247749 (OMIM: 610863,615185) PREDICTED: guanine (340 aa) initn: 423 init1: 254 opt: 421 Z-score: 337.4 bits: 71.4 E(85289): 4.7e-12 Smith-Waterman score: 422; 28.1% identity (59.3% similar) in 295 aa overlap (237-518:62-339) 210 220 230 240 250 260 pF1KB5 TSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSPNSKMLATACWSGLCKLWSVPDCNLLH :.. .:..:..: .: .:. : .: XP_005 QITSNMDSVGRIQMRTRRTLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMH 40 50 60 70 80 90 270 280 290 300 310 320 pF1KB5 TLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCAA-DGSVKLWSLDSDEPVADIEGHTVRV .. ... : . .. :.. : ..:.. :. ....: . : :. ::: XP_005 AIPLRSSWVMTCAYAPSG---------NYVACGGLDNICSIYNLKTRE------GN-VRV 100 110 120 130 330 340 350 360 370 pF1KB5 ARVMWHPSG-----RFLG-----TTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQD .: . .: ::: :. : . :::.:. .. ::: :..... : XP_005 SRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPD 140 150 160 170 180 190 380 390 400 410 420 430 pF1KB5 GSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDL .:. :: ...::.: : : . . ::...: ...: :::: .:::: : ::...:: XP_005 MRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRLFDL 200 210 220 230 240 250 440 450 460 470 480 490 pF1KB5 RQRRCVYTIPAHQNLVTGVKFEPIH--GNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGK : . . . .:.:.. :. . : .::.: : . ..: . .::::... XP_005 RADQELL-LYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHDNR 260 270 280 290 300 310 500 510 520 pF1KB5 VMGLDISSDGQLIATCSYDRTFKLWMAE : : ...::. .:: :.: ...: XP_005 VSCLGVTDDGMAVATGSWDSFLRIWN 320 330 340 521 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:08:26 2016 done: Sun Nov 6 22:08:27 2016 Total Scan time: 8.550 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]