Result of FASTA (omim) for pFN21AB8685
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8685, 717 aa
  1>>>pF1KB8685 717 - 717 aa - 717 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.4126+/-0.000311; mu= 11.3362+/- 0.020
 mean_var=145.1765+/-28.500, 0's: 0 Z-trim(121.1): 24  B-trim: 0 in 0/56
 Lambda= 0.106445
 statistics sampled from 37205 (37231) to 37205 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.756), E-opt: 0.2 (0.437), width:  16
 Scan time: 10.130

The best scores are:                                      opt bits E(85289)
NP_110412 (OMIM: 607548) radial spoke head protein ( 717) 4891 762.9       0
XP_011525653 (OMIM: 607548) PREDICTED: radial spok ( 647) 4361 681.5 2.9e-195
NP_001010892 (OMIM: 612647,612649) radial spoke he ( 716) 1978 315.5 4.5e-85
XP_016866315 (OMIM: 612647,612649) PREDICTED: radi ( 600) 1245 202.9   3e-51
NP_001155136 (OMIM: 612647,612649) radial spoke he ( 600) 1245 202.9   3e-51


>>NP_110412 (OMIM: 607548) radial spoke head protein 6 h  (717 aa)
 initn: 4891 init1: 4891 opt: 4891  Z-score: 4065.9  bits: 762.9 E(85289):    0
Smith-Waterman score: 4891; 100.0% identity (100.0% similar) in 717 aa overlap (1-717:1-717)

               10        20        30        40        50        60
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB8 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
              610       620       630       640       650       660

              670       680       690       700       710       
pF1KB8 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_110 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD
              670       680       690       700       710       

>>XP_011525653 (OMIM: 607548) PREDICTED: radial spoke he  (647 aa)
 initn: 4361 init1: 4361 opt: 4361  Z-score: 3626.6  bits: 681.5 E(85289): 2.9e-195
Smith-Waterman score: 4361; 100.0% identity (100.0% similar) in 638 aa overlap (1-638:1-638)

               10        20        30        40        50        60
pF1KB8 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALAADPEERQQIPPDAQRNAPGWSQR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFPSEFQPQPYSDESRMQVAELTTSLML
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTDQFSEGAQHGPYIRDDPALQFLPSEL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDLSLYEHLVNLLTKILNQRPEDPLSVL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQKALFTRSGGGTEGEQEMEEEVGETP
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLVEQQPIHTCRFWGKILGIKRSYLVAEV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB8 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EFREGEEEAEEEEVEEMTEGGEVMEAHGEEEGEEDEEKAVDIVPKSVWKPPPVIPKEESR
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB8 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SGANKYLYFVCNEPGLPWTRLPHVTPAQIVNARKIKKFFTGYLDTPVVSYPPFPGNEANY
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB8 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LRAQIARISAATQVSPLGFYQFSEEEGDEEEEGGAGRDSYEENPDFEGIPVLELVDSMAN
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KB8 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 WVHHTQHILPQGRCTWVNPLQKTEEEEDLGEEEEKADEGPEEVEQEVGPPLLTPLSEDAE
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KB8 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGKKFENIYIGWGHKYSPESFNPA
       ::::::::::::::::::::::::::::::::::::::                      
XP_011 IMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGAYAYASGNVSLLLQKV             
              610       620       630       640                    

              670       680       690       700       710       
pF1KB8 LPAPIQQEYPSGPEIMEMSDPTVEEEQALKAAQEQALGATEEEEEGEEEEEGEETDD

>>NP_001010892 (OMIM: 612647,612649) radial spoke head p  (716 aa)
 initn: 1905 init1: 914 opt: 1978  Z-score: 1648.3  bits: 315.5 E(85289): 4.5e-85
Smith-Waterman score: 2305; 51.5% identity (76.5% similar) in 714 aa overlap (8-716:42-716)

                                      10        20        30       
pF1KB8                        MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
                                     : .  : :   : :..:.    ...:..  
NP_001 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
              20        30        40        50        60        70 

        40          50        60        70        80        90     
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
       . :   : ..  : . :. :. :       ...:  :   :..  :  ..  : ..: .:
NP_001 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
              80         90       100         110          120     

         100       110       120       130       140       150     
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
       . .. .  . ::  . .  . .  .:. :: .  :  . : ....   . : .:...: .
NP_001 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQEE
         130       140       150       160       170        180    

         160       170       180       190       200       210     
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
       .     ... :  ..::    :.       ...:  :  ::...::::::::.:: :  .
NP_001 D-----SNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
               190                  200        210       220       

         220       230       240       250       260       270     
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
       .::.:: :.::::::.:::. ....:.... ..   :  :.:.:... :. :::..::::
NP_001 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
       230       240       250       260       270       280       

         280        290       300       310       320       330    
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
       :::: .  :  :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
NP_001 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
       290         300       310       320       330       340     

          340       350       360         370       380       390  
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
       . .::. :::::::::.. .:.::::::::::  ::.:::.: :  ..::  :::   : 
NP_001 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
         350       360       370       380       390           400 

            400       410       420       430       440       450  
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
       ::::      .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
NP_001 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
                   410       420       430       440       450     

            460       470       480       490       500       510  
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
       ::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
NP_001 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
         460       470       480       490       500       510     

            520       530       540       550       560       570  
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
       . .::.:.::::::::: :..::.:..:::::.:::: ::::.: : .::.::::.  ::
NP_001 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQGRCNWFNSIQKNEEEEE--EE
         520       530       540       550       560       570     

            580       590       600       610       620       630  
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
       .:. :.. . .::::: :::::.::: ::... ::::::: .: :::..::..:::::::
NP_001 DEEKDDS-DYIEQEVGLPLLTPISEDLEIQNIPPWTTRLSSNLIPQYAIAVLQSNLWPGA
           580        590       600       610       620       630  

            640       650       660       670       680       690  
pF1KB8 YAYASGKKFENIYIGWGHKYSPESFNPALPAPIQQEYPSGPEIMEMSDPTVEEEQALKAA
       ::...::::::.::::::::::....: .: :. ::::::::: ::.::.::::::..::
NP_001 YAFSNGKKFENFYIGWGHKYSPDNYTPPVPPPVYQEYPSGPEITEMDDPSVEEEQAFRAA
            640       650       660       670       680       690  

            700       710       
pF1KB8 QEQALGATEEEEEGEEEEEGEETDD
       :: .: :.:.::  :.:.: .. : 
NP_001 QEAVLLAAENEESEEDEDEEDDYD 
            700       710       

>>XP_016866315 (OMIM: 612647,612649) PREDICTED: radial s  (600 aa)
 initn: 1504 init1: 810 opt: 1245  Z-score: 1041.0  bits: 202.9 E(85289): 3e-51
Smith-Waterman score: 1572; 48.5% identity (73.2% similar) in 549 aa overlap (8-551:42-554)

                                      10        20        30       
pF1KB8                        MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
                                     : .  : :   : :..:.    ...:..  
XP_016 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
              20        30        40        50        60        70 

        40          50        60        70        80        90     
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
       . :   : ..  : . :. :. :       ...:  :   :..  :  ..  : ..: .:
XP_016 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
              80         90       100         110          120     

         100       110       120       130       140       150     
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
       . .. .  . ::  . .  . .  .:. :: .  :  . : ....   . : .:...:  
XP_016 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQ--
         130       140       150       160       170        180    

         160       170       180       190       200       210     
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
          :  ... :  ..::    :.       ...:  :  ::...::::::::.:: :  .
XP_016 ---EEDSNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
               190                  200        210       220       

         220       230       240       250       260       270     
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
       .::.:: :.::::::.:::. ....:.... ..   :  :.:.:... :. :::..::::
XP_016 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
       230       240       250       260       270       280       

         280        290       300       310       320       330    
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
       :::: .  :  :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
XP_016 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
       290         300       310       320       330       340     

          340       350       360         370       380       390  
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
       . .::. :::::::::.. .:.::::::::::  ::.:::.: :  ..::  :::   : 
XP_016 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
         350       360       370       380       390           400 

            400       410       420       430       440       450  
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
       ::::      .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
XP_016 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
                   410       420       430       440       450     

            460       470       480       490       500       510  
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
       ::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
XP_016 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
         460       470       480       490       500       510     

            520       530       540       550       560       570  
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
       . .::.:.::::::::: :..::.:..:::::.:::: :                     
XP_016 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQRFRIYPPGQHGYPQISFHNML
         520       530       540       550       560       570     

            580       590       600       610       620       630  
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
                                                                   
XP_016 LQSFNPTFGLEHMPSPMAKSLKIST                                   
         580       590       600                                   

>>NP_001155136 (OMIM: 612647,612649) radial spoke head p  (600 aa)
 initn: 1504 init1: 810 opt: 1245  Z-score: 1041.0  bits: 202.9 E(85289): 3e-51
Smith-Waterman score: 1572; 48.5% identity (73.2% similar) in 549 aa overlap (8-551:42-554)

                                      10        20        30       
pF1KB8                        MGDLPPYPERPAQQPPGRRTSQASQRRHSRDQAQALA
                                     : .  : :   : :..:.    ...:..  
NP_001 ENQEELGETRRPWEGKTAASPQYSEPESSEPLEAKQGPETGRQSRSSRPWSPQSRAKTPL
              20        30        40        50        60        70 

        40          50        60        70        80        90     
pF1KB8 ADPE--ERQQIPPDAQRNAPGWSQRGSLSQQENLLMPQVFQAEEARLGGMEYPSVNTGFP
       . :   : ..  : . :. :. :       ...:  :   :..  :  ..  : ..: .:
NP_001 GGPAGPETSSPAPVSPRE-PSSSPSPLAPARQDLAAPP--QSD--RTTSV-IPEAGTPYP
              80         90       100         110          120     

         100       110       120       130       140       150     
pF1KB8 SEFQPQPYSDESRMQVAELTTSLMLQRLQQGQSSLFQQLDPTFQEPPVNPLGQFNLYQTD
       . .. .  . ::  . .  . .  .:. :: .  :  . : ....   . : .:...:  
NP_001 DPLEQSSDKRESTPHHTSQSEGNTFQQSQQPKPHLCGRRDVSYNNAKQKEL-RFDVFQ--
         130       140       150       160       170        180    

         160       170       180       190       200       210     
pF1KB8 QFSEGAQHGPYIRDDPALQFLPSELGFPHYSAQVPEPEPLELAVQNAKAYLLQTSINCDL
          :  ... :  ..::    :.       ...:  :  ::...::::::::.:: :  .
NP_001 ---EEDSNSDYDLQQPA----PG-------GSEVA-PSMLEITIQNAKAYLLKTSSNSGF
               190                  200        210       220       

         220       230       240       250       260       270     
pF1KB8 SLYEHLVNLLTKILNQRPEDPLSVLESLNRTTQWEWFHPKLDTLRDDPEMQPTYKMAEKQ
       .::.:: :.::::::.:::. ....:.... ..   :  :.:.:... :. :::..::::
NP_001 NLYDHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQ
       230       240       250       260       270       280       

         280        290       300       310       320       330    
pF1KB8 KALFTRSGGGTEG-EQEMEEEVGETPVPNIMETAFYFEQAGVGLSSDESFRIFLAMKQLV
       :::: .  :  :: .::.:.:..:. .::.::.:::::::::::..::..:::::.:::.
NP_001 KALFLQ--GHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRIFLALKQLT
       290         300       310       320       330       340     

          340       350       360         370       380       390  
pF1KB8 EQQPIHTCRFWGKILGIKRSYLVAEVEFREGE--EEAEEEEVEEMTEGGEVMEAHGEEEG
       . .::. :::::::::.. .:.::::::::::  ::.:::.: :  ..::  :::   : 
NP_001 DTHPIQRCRFWGKILGLEMNYIVAEVEFREGEDEEEVEEEDVAEERDNGES-EAH---ED
         350       360       370       380       390           400 

            400       410       420       430       440       450  
pF1KB8 EEDEEKAVDIVPKSVWKPPPVIPKEESRSGANKYLYFVCNEPGLPWTRLPHVTPAQIVNA
       ::::      .::: .: : .:::::::.:::::.:::::::: ::..:: : ::::: :
NP_001 EEDE------LPKSFYKAPQAIPKEESRTGANKYVYFVCNEPGRPWVKLPPVIPAQIVIA
                   410       420       430       440       450     

            460       470       480       490       500       510  
pF1KB8 RKIKKFFTGYLDTPVVSYPPFPGNEANYLRAQIARISAATQVSPLGFYQFSEEEGDEEEE
       ::::::::: ::.:..:::::::::.::::::::::::.:.:::::::::.::::.::::
NP_001 RKIKKFFTGRLDAPIISYPPFPGNESNYLRAQIARISAGTHVSPLGFYQFGEEEGEEEEE
         460       470       480       490       500       510     

            520       530       540       550       560       570  
pF1KB8 GGAGRDSYEENPDFEGIPVLELVDSMANWVHHTQHILPQGRCTWVNPLQKTEEEEDLGEE
       . .::.:.::::::::: :..::.:..:::::.:::: :                     
NP_001 AEGGRNSFEENPDFEGIQVIDLVESLSNWVHHVQHILSQRFRIYPPGQHGYPQISFHNML
         520       530       540       550       560       570     

            580       590       600       610       620       630  
pF1KB8 EEKADEGPEEVEQEVGPPLLTPLSEDAEIMHLAPWTTRLSCSLCPQYSVAVVRSNLWPGA
                                                                   
NP_001 LQSFNPTFGLEHMPSPMAKSLKIST                                   
         580       590       600                                   




717 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 22:10:02 2016 done: Sat Nov  5 22:10:03 2016
 Total Scan time: 10.130 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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