Result of FASTA (omim) for pFN21AB6881
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6881, 181 aa
  1>>>pF1KB6881 181 - 181 aa - 181 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0351+/-0.000456; mu= 15.0266+/- 0.029
 mean_var=100.6826+/-22.434, 0's: 0 Z-trim(111.2): 249  B-trim: 619 in 1/52
 Lambda= 0.127819
 statistics sampled from 19380 (19754) to 19380 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.606), E-opt: 0.2 (0.232), width:  16
 Scan time:  5.420

The best scores are:                                      opt bits E(85289)
NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 ( 181) 1186 229.0 3.1e-60
XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 181) 1186 229.0 3.1e-60
NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 ( 181) 1153 223.0 2.1e-58
NP_001019399 (OMIM: 103180) ADP-ribosylation facto ( 181) 1153 223.0 2.1e-58
NP_001019397 (OMIM: 103180) ADP-ribosylation facto ( 181) 1153 223.0 2.1e-58
NP_001019398 (OMIM: 103180) ADP-ribosylation facto ( 181) 1153 223.0 2.1e-58
NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 ( 180)  960 187.4 1.1e-47
NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 ( 180)  957 186.8 1.6e-47
NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 ( 175)  860 168.9 3.8e-42
XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosyl ( 137)  822 161.8 4.2e-40
XP_016856722 (OMIM: 103180) PREDICTED: ADP-ribosyl ( 212)  800 157.9 9.3e-39
NP_001168 (OMIM: 603425) ADP-ribosylation factor-l ( 181)  719 142.9 2.6e-34
XP_005248554 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 398)  697 139.3 7.3e-33
NP_001647 (OMIM: 601747) E3 ubiquitin-protein liga ( 574)  697 139.5 9.2e-33
NP_150230 (OMIM: 601747) E3 ubiquitin-protein liga ( 569)  613 124.0 4.2e-28
XP_016864933 (OMIM: 601747) PREDICTED: E3 ubiquiti ( 569)  613 124.0 4.2e-28
NP_036229 (OMIM: 608960) ADP-ribosylation factor-l ( 179)  598 120.6 1.4e-27
NP_848930 (OMIM: 608909) ADP-ribosylation factor-l ( 179)  598 120.6 1.4e-27
NP_150231 (OMIM: 601747) E3 ubiquitin-protein liga ( 546)  584 118.6 1.7e-26
NP_001658 (OMIM: 601175) ADP-ribosylation factor-l ( 184)  561 113.8 1.6e-25
NP_079323 (OMIM: 614439) ADP-ribosylation factor-l ( 192)  545 110.9 1.2e-24
XP_016871749 (OMIM: 604695) PREDICTED: ADP-ribosyl ( 182)  541 110.1   2e-24
NP_004302 (OMIM: 604695) ADP-ribosylation factor-l ( 182)  541 110.1   2e-24
NP_005728 (OMIM: 604787) ADP-ribosylation factor-l ( 192)  525 107.2 1.6e-23
NP_001269360 (OMIM: 604787) ADP-ribosylation facto ( 201)  525 107.2 1.7e-23
NP_001287997 (OMIM: 603425) ADP-ribosylation facto ( 135)  507 103.7 1.3e-22
NP_997625 (OMIM: 604786) ADP-ribosylation factor-l ( 200)  505 103.5 2.1e-22
NP_001182325 (OMIM: 604786) ADP-ribosylation facto ( 200)  505 103.5 2.1e-22
NP_005729 (OMIM: 604786) ADP-ribosylation factor-l ( 200)  505 103.5 2.1e-22
NP_001032241 (OMIM: 604786) ADP-ribosylation facto ( 200)  505 103.5 2.1e-22
NP_817114 (OMIM: 608960) ADP-ribosylation factor-l ( 142)  490 100.6 1.2e-21
NP_001032251 (OMIM: 608960) ADP-ribosylation facto ( 142)  490 100.6 1.2e-21
XP_005252458 (OMIM: 608909) PREDICTED: ADP-ribosyl ( 142)  486 99.8 1.9e-21
NP_001652 (OMIM: 600732) ADP-ribosylation factor-l ( 201)  474 97.8 1.1e-20
XP_011523084 (OMIM: 600732) PREDICTED: ADP-ribosyl ( 201)  474 97.8 1.1e-20
NP_001265222 (OMIM: 209900,268000,600151,608845,61 ( 186)  472 97.4 1.4e-20
NP_115522 (OMIM: 209900,268000,600151,608845,61357 ( 186)  472 97.4 1.4e-20
XP_016862800 (OMIM: 209900,268000,600151,608845,61 ( 186)  472 97.4 1.4e-20
NP_816931 (OMIM: 209900,268000,600151,608845,61357 ( 186)  472 97.4 1.4e-20
NP_001310442 (OMIM: 209900,268000,600151,608845,61 ( 193)  458 94.8 8.4e-20
XP_005266310 (OMIM: 609351) PREDICTED: ADP-ribosyl ( 196)  448 93.0 3.1e-19
NP_612459 (OMIM: 609351) ADP-ribosylation factor-l ( 196)  448 93.0 3.1e-19
NP_060654 (OMIM: 616596) ADP-ribosylation factor-l ( 186)  399 83.9 1.6e-16
XP_016862801 (OMIM: 209900,268000,600151,608845,61 ( 159)  388 81.8 5.7e-16
NP_001310443 (OMIM: 209900,268000,600151,608845,61 ( 159)  388 81.8 5.7e-16
NP_620150 (OMIM: 616597) ADP-ribosylation factor-l ( 186)  386 81.5 8.2e-16
NP_001186674 (OMIM: 601175) ADP-ribosylation facto ( 157)  370 78.5 5.7e-15
NP_001254476 (OMIM: 604699) ADP-ribosylation facto ( 201)  354 75.7 5.1e-14
NP_001254477 (OMIM: 604699) ADP-ribosylation facto ( 201)  354 75.7 5.1e-14
XP_016883065 (OMIM: 604699) PREDICTED: ADP-ribosyl ( 201)  354 75.7 5.1e-14


>>NP_001650 (OMIM: 103190) ADP-ribosylation factor 3 [Ho  (181 aa)
 initn: 1186 init1: 1186 opt: 1186  Z-score: 1202.3  bits: 229.0 E(85289): 3.1e-60
Smith-Waterman score: 1186; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
              130       140       150       160       170       180

        
pF1KB6 K
       :
NP_001 K
        

>>XP_005268913 (OMIM: 103190) PREDICTED: ADP-ribosylatio  (181 aa)
 initn: 1186 init1: 1186 opt: 1186  Z-score: 1202.3  bits: 229.0 E(85289): 3.1e-60
Smith-Waterman score: 1186; 100.0% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
              130       140       150       160       170       180

        
pF1KB6 K
       :
XP_005 K
        

>>NP_001649 (OMIM: 103180) ADP-ribosylation factor 1 [Ho  (181 aa)
 initn: 1153 init1: 1153 opt: 1153  Z-score: 1169.4  bits: 223.0 E(85289): 2.1e-58
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       :::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
              130       140       150       160       170       180

        
pF1KB6 K
       :
NP_001 K
        

>>NP_001019399 (OMIM: 103180) ADP-ribosylation factor 1   (181 aa)
 initn: 1153 init1: 1153 opt: 1153  Z-score: 1169.4  bits: 223.0 E(85289): 2.1e-58
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       :::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
              130       140       150       160       170       180

        
pF1KB6 K
       :
NP_001 K
        

>>NP_001019397 (OMIM: 103180) ADP-ribosylation factor 1   (181 aa)
 initn: 1153 init1: 1153 opt: 1153  Z-score: 1169.4  bits: 223.0 E(85289): 2.1e-58
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       :::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
              130       140       150       160       170       180

        
pF1KB6 K
       :
NP_001 K
        

>>NP_001019398 (OMIM: 103180) ADP-ribosylation factor 1   (181 aa)
 initn: 1153 init1: 1153 opt: 1153  Z-score: 1169.4  bits: 223.0 E(85289): 2.1e-58
Smith-Waterman score: 1153; 96.1% identity (100.0% similar) in 181 aa overlap (1-181:1-181)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       :::::.::.:.:.:::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGNIFANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::.:.
NP_001 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLSNQLRNQ
              130       140       150       160       170       180

        
pF1KB6 K
       :
NP_001 K
        

>>NP_001651 (OMIM: 601177) ADP-ribosylation factor 4 [Ho  (180 aa)
 initn: 960 init1: 960 opt: 960  Z-score: 977.1  bits: 187.4 E(85289): 1.1e-47
Smith-Waterman score: 960; 78.9% identity (94.4% similar) in 180 aa overlap (1-180:1-180)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       ::  ...:.. :.:::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       : ::::::::::.:::::.::::::::::::::::::::..:. .::..::  :::::::
NP_001 ICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       ::.:::::::::::  .:.::::::.:::.:.::.::::::.: :::::::::.:.:...
NP_001 LLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR
              130       140       150       160       170       180

        
pF1KB6 K

>>NP_001653 (OMIM: 103188) ADP-ribosylation factor 5 [Ho  (180 aa)
 initn: 957 init1: 957 opt: 957  Z-score: 974.1  bits: 186.8 E(85289): 1.6e-47
Smith-Waterman score: 957; 78.9% identity (93.3% similar) in 180 aa overlap (1-180:1-180)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       ::   . :.. ..:::.:::::::::::::::::::::::::::::::::::::::::::
NP_001 MGLTVSALFSRIFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       : ::::::::::::::::::::::::::::::::::::::.:. .::..:: ::::::::
NP_001 ICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       :::::::::.:::: ..:.::::::. :: :.::.::::::.: :::.:::::...:...
NP_001 LLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHELSKR
              130       140       150       160       170       180

        
pF1KB6 K

>>NP_001654 (OMIM: 600464) ADP-ribosylation factor 6 [Ho  (175 aa)
 initn: 878 init1: 836 opt: 860  Z-score: 877.6  bits: 168.9 E(85289): 3.8e-42
Smith-Waterman score: 860; 69.5% identity (90.2% similar) in 174 aa overlap (6-179:2-175)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
            :..:....:.:::::::.:::::::::::::::::. ::::::.::::::: :::
NP_001     MGKVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKN
                   10        20        30        40        50      

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ..:.:::::::::::::::::. .:::::::::  ::.:..:::.:: :.. . :.:::.
NP_001 VKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAI
         60        70        80        90       100       110      

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       .:.::::::::.::.  :: .::::  .: ::::.: .:::::::::::: ::... :. 
NP_001 ILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 
        120       130       140       150       160       170      

        
pF1KB6 K

>>XP_006719454 (OMIM: 103190) PREDICTED: ADP-ribosylatio  (137 aa)
 initn: 822 init1: 822 opt: 822  Z-score: 840.9  bits: 161.8 E(85289): 4.2e-40
Smith-Waterman score: 822; 100.0% identity (100.0% similar) in 128 aa overlap (1-128:1-128)

               10        20        30        40        50        60
pF1KB6 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELRDAV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LLVFANKQDLPNAMNAAEITDKLGLHSLRHRNWYIQATCATSGDGLYEGLDWLANQLKNK
       ::::::::                                                    
XP_006 LLVFANKQVPEQSLRPG                                           
              130                                                  




181 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 14:35:32 2016 done: Fri Nov  4 14:35:33 2016
 Total Scan time:  5.420 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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