Result of FASTA (omim) for pFN21AE3930
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3930, 401 aa
  1>>>pF1KE3930 401 - 401 aa - 401 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 9.1163+/-0.000336; mu= 1.4926+/- 0.021
 mean_var=253.0610+/-51.943, 0's: 0 Z-trim(123.8): 15  B-trim: 1071 in 1/55
 Lambda= 0.080623
 statistics sampled from 44194 (44218) to 44194 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.814), E-opt: 0.2 (0.518), width:  16
 Scan time:  9.100

The best scores are:                                      opt bits E(85289)
NP_113618 (OMIM: 607848) rab-interacting lysosomal ( 401) 2665 322.5 1.1e-87
XP_005256868 (OMIM: 607848) PREDICTED: rab-interac ( 373) 2055 251.5 2.4e-66
XP_016880684 (OMIM: 607848) PREDICTED: rab-interac ( 273) 1505 187.5 3.5e-47
XP_011536584 (OMIM: 614092) PREDICTED: RILP-like p ( 343)  400 59.0   2e-08
NP_001306172 (OMIM: 614092) RILP-like protein 1 is ( 386)  395 58.5 3.3e-08
NP_847884 (OMIM: 614092) RILP-like protein 1 isofo ( 403)  395 58.5 3.4e-08
XP_006719435 (OMIM: 614092) PREDICTED: RILP-like p ( 411)  395 58.5 3.4e-08
NP_001306231 (OMIM: 614092) RILP-like protein 1 is ( 252)  373 55.8 1.4e-07
NP_001306173 (OMIM: 614092) RILP-like protein 1 is ( 252)  373 55.8 1.4e-07
XP_011536586 (OMIM: 614092) PREDICTED: RILP-like p ( 257)  373 55.8 1.4e-07
XP_011536587 (OMIM: 614092) PREDICTED: RILP-like p ( 257)  373 55.8 1.4e-07
XP_006719436 (OMIM: 614092) PREDICTED: RILP-like p ( 260)  373 55.8 1.5e-07


>>NP_113618 (OMIM: 607848) rab-interacting lysosomal pro  (401 aa)
 initn: 2665 init1: 2665 opt: 2665  Z-score: 1695.1  bits: 322.5 E(85289): 1.1e-87
Smith-Waterman score: 2665; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_113 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
              310       320       330       340       350       360

              370       380       390       400 
pF1KE3 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
       :::::::::::::::::::::::::::::::::::::::::
NP_113 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
              370       380       390       400 

>>XP_005256868 (OMIM: 607848) PREDICTED: rab-interacting  (373 aa)
 initn: 2048 init1: 2048 opt: 2055  Z-score: 1312.1  bits: 251.5 E(85289): 2.4e-66
Smith-Waterman score: 2391; 93.0% identity (93.0% similar) in 401 aa overlap (1-401:1-373)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE3 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRKQRKK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
       :::::::::::::::                            :::::::::::::::::
XP_005 IKAKMLGTPEEAESS----------------------------FGLWYRGKAESSEDETS
              310                                   320       330  

              370       380       390       400 
pF1KE3 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
       :::::::::::::::::::::::::::::::::::::::::
XP_005 SPAPSKLGGEEEAQPQSPAPDPPCSALHEHLCLGASAAPEA
            340       350       360       370   

>>XP_016880684 (OMIM: 607848) PREDICTED: rab-interacting  (273 aa)
 initn: 1550 init1: 1485 opt: 1505  Z-score: 968.1  bits: 187.5 E(85289): 3.5e-47
Smith-Waterman score: 1505; 93.2% identity (94.8% similar) in 251 aa overlap (1-247:1-251)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ALELLEQAAVGPAPDSLQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DRQRDELRAHNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRAAQDRERERQ
              130       140       150       160       170       180

              190       200       210       220       230          
pF1KE3 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLG-RPSEAG
       :::::::::::::::::::::::::::::::::::::::::::::. : .  : :::  :
XP_016 QPGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPGAAHRPPGPRPSARG
              190       200       210       220       230       240

     240          250       260       270       280       290      
pF1KE3 Q---CRFSREEFEQILQERNELKAKVFLLKEELAYFQRELLTDHRVPGLLLEAMKVAVRK
       .   :  . ::                                                 
XP_016 HEGGCPEAAEEDQGQDVRDTRGSREQLWPMVSG                           
              250       260       270                              

>>XP_011536584 (OMIM: 614092) PREDICTED: RILP-like prote  (343 aa)
 initn: 360 init1: 206 opt: 400  Z-score: 272.2  bits: 59.0 E(85289): 2e-08
Smith-Waterman score: 400; 34.1% identity (64.3% similar) in 252 aa overlap (48-283:23-267)

        20        30        40        50        60        70       
pF1KE3 AAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVRALELLEQAAVGPAPDSL
                                     :. . ::     . :::.:..  : : : :
XP_011         MERYLDQIPKERWGRGPRLPRHPQDSRGLWLPWRKELELVEDVWRGEAQDLL
                       10        20        30        40        50  

        80           90       100           110       120       130
pF1KE3 QVSAQPAE---QELRRLREENERLRREL---RAGPQE-ERALLRQLKEVTDRQRDELRAH
       .  ::  :   : .  : ...  . .:    . : .: :: ....::::.:.::::.::.
XP_011 SQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRAK
             60        70        80        90       100       110  

              140       150       160       170               180  
pF1KE3 NRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQP
       .:.:  .....::::.:  ::. .: .:::.......: .:          : . ..:. 
XP_011 DRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEM
            120       130       140       150       160       170  

            190       200       210       220       230       240  
pF1KE3 GEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCR
       :   .  .: : : : :. ...  .:::   .:  . .. :  :   .. .::      :
XP_011 GSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------R
            180        190       200       210       220           

            250       260       270        280       290       300 
pF1KE3 FSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKI
       :. .:....:.::::::.:::::.:::::.. .:.  ..:.:                  
XP_011 FTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGI
         230       240       250       260       270       280     

             310       320       330       340       350       360 
pF1KE3 KAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSS
                                                                   
XP_011 KRLKEGPLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL  
         290       300       310       320       330       340     

>>NP_001306172 (OMIM: 614092) RILP-like protein 1 isofor  (386 aa)
 initn: 513 init1: 206 opt: 395  Z-score: 268.4  bits: 58.5 E(85289): 3.3e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
                                  :: .:. .: :.. .  . : :: : :.: :::
NP_001  MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
                10        20        30        40        50         

                   70        80                                    
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
       .::.::    .  :.:  : :..                                 ::  
NP_001 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
      60        70        80        90       100       110         

           90       100                      110       120         
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
        ... .:.:::..:  .:              . : .: :: ....::::.:.::::.::
NP_001 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
     120       130       140       150       160       170         

     130       140       150       160       170               180 
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
       ..:.:  .....::::.:  ::. .: .:::.......: .:          : . ..:.
NP_001 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
     180       190       200       210       220       230         

             190       200       210       220       230       240 
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
        :   .  .: : : : :. ...  .:::   .:  . .. :  :   .. .::      
NP_001 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
     240       250        260       270       280       290        

             250       260       270        280       290       300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
       ::. .:....:.::::::.:::::.:::::.. .:.  ..:.:                 
NP_001 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
            300       310       320       330       340       350  

              310       320       330       340       350       360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
                                                                   
NP_001 IKRLIFTAIMPMVAAGLIIDDPTLQPVRRLVSLV                          
            360       370       380                                

>>NP_847884 (OMIM: 614092) RILP-like protein 1 isoform 1  (403 aa)
 initn: 513 init1: 206 opt: 395  Z-score: 268.1  bits: 58.5 E(85289): 3.4e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
                                  :: .:. .: :.. .  . : :: : :.: :::
NP_847  MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
                10        20        30        40        50         

                   70        80                                    
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
       .::.::    .  :.:  : :..                                 ::  
NP_847 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
      60        70        80        90       100       110         

           90       100                      110       120         
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
        ... .:.:::..:  .:              . : .: :: ....::::.:.::::.::
NP_847 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
     120       130       140       150       160       170         

     130       140       150       160       170               180 
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
       ..:.:  .....::::.:  ::. .: .:::.......: .:          : . ..:.
NP_847 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
     180       190       200       210       220       230         

             190       200       210       220       230       240 
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
        :   .  .: : : : :. ...  .:::   .:  . .. :  :   .. .::      
NP_847 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
     240       250        260       270       280       290        

             250       260       270        280       290       300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
       ::. .:....:.::::::.:::::.:::::.. .:.  ..:.:                 
NP_847 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
            300       310       320       330       340       350  

              310       320       330       340       350       360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
                                                                   
NP_847 IKRLFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL         
            360       370       380       390       400            

>>XP_006719435 (OMIM: 614092) PREDICTED: RILP-like prote  (411 aa)
 initn: 513 init1: 206 opt: 395  Z-score: 268.0  bits: 58.5 E(85289): 3.4e-08
Smith-Waterman score: 401; 31.3% identity (58.2% similar) in 316 aa overlap (28-283:27-335)

               10        20        30        40        50        60
pF1KE3 MEPRRAAPGVPGWGSREAAGSASAAELVYHLAGALGTELQDLARRFGPEAAAGLVPLVVR
                                  :: .:. .: :.. .  . : :: : :.: :::
XP_006  MEEERGSALAAESALEKNVAELTVMDVYDIASLVGHEFERVIDQHGCEAIARLMPKVVR
                10        20        30        40        50         

                   70        80                                    
pF1KE3 ALELLE----QAAVGPAPDSLQVS--------------------------------AQPA
       .::.::    .  :.:  : :..                                 ::  
XP_006 VLEILEVLVSRHHVAPELDELRLELDRLRLERMDRIEKERKHQKELELVEDVWRGEAQDL
      60        70        80        90       100       110         

           90       100                      110       120         
pF1KE3 EQELRRLREENERLRREL--------------RAGPQE-ERALLRQLKEVTDRQRDELRA
        ... .:.:::..:  .:              . : .: :: ....::::.:.::::.::
XP_006 LSQIAQLQEENKQLMTNLSHKDVNFSEEEFQKHEGMSERERQVMKKLKEVVDKQRDEIRA
     120       130       140       150       160       170         

     130       140       150       160       170               180 
pF1KE3 HNRDLRQRGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQ
       ..:.:  .....::::.:  ::. .: .:::.......: .:          : . ..:.
XP_006 KDRELGLKNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQE
     180       190       200       210       220       230         

             190       200       210       220       230       240 
pF1KE3 PGEAATPQAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQC
        :   .  .: : : : :. ...  .:::   .:  . .. :  :   .. .::      
XP_006 MGSLRAELGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------
     240       250        260       270       280       290        

             250       260       270        280       290       300
pF1KE3 RFSREEFEQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKK
       ::. .:....:.::::::.:::::.:::::.. .:.  ..:.:                 
XP_006 RFTLQELRDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESG
            300       310       320       330       340       350  

              310       320       330       340       350       360
pF1KE3 IKAKMLGTPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETS
                                                                   
XP_006 IKRLKEGPLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL 
            360       370       380       390       400       410  

>>NP_001306231 (OMIM: 614092) RILP-like protein 1 isofor  (252 aa)
 initn: 360 init1: 206 opt: 373  Z-score: 257.0  bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:6-184)

         80        90       100       110       120       130      
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
                                     ..:: ....::::.:.::::.::..:.:  
NP_001                          MTGMSERERQVMKKLKEVVDKQRDEIRAKDRELGL
                                        10        20        30     

        140       150       160       170               180        
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
       .....::::.:  ::. .: .:::.......: .:          : . ..:. :   . 
NP_001 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
          40        50        60        70        80        90     

      190       200       210       220       230       240        
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
        .: : : : :. ...  .:::   .:  . .. :  :   .. .::      ::. .:.
NP_001 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
         100        110       120       130       140              

      250       260       270        280       290       300       
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
       ...:.::::::.:::::.:::::.. .:.  ..:.:                        
NP_001 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLFSF
      150       160       170       180       190       200        

       310       320       330       340       350       360       
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
                                                                   
NP_001 FSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL                
      210       220       230       240       250                  

>>NP_001306173 (OMIM: 614092) RILP-like protein 1 isofor  (252 aa)
 initn: 360 init1: 206 opt: 373  Z-score: 257.0  bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:6-184)

         80        90       100       110       120       130      
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
                                     ..:: ....::::.:.::::.::..:.:  
NP_001                          MTGMSERERQVMKKLKEVVDKQRDEIRAKDRELGL
                                        10        20        30     

        140       150       160       170               180        
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
       .....::::.:  ::. .: .:::.......: .:          : . ..:. :   . 
NP_001 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
          40        50        60        70        80        90     

      190       200       210       220       230       240        
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
        .: : : : :. ...  .:::   .:  . .. :  :   .. .::      ::. .:.
NP_001 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
         100        110       120       130       140              

      250       260       270        280       290       300       
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
       ...:.::::::.:::::.:::::.. .:.  ..:.:                        
NP_001 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLFSF
      150       160       170       180       190       200        

       310       320       330       340       350       360       
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
                                                                   
NP_001 FSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL                
      210       220       230       240       250                  

>>XP_011536586 (OMIM: 614092) PREDICTED: RILP-like prote  (257 aa)
 initn: 360 init1: 206 opt: 373  Z-score: 256.9  bits: 55.8 E(85289): 1.4e-07
Smith-Waterman score: 373; 36.0% identity (69.9% similar) in 186 aa overlap (107-283:3-181)

         80        90       100       110       120       130      
pF1KE3 LQVSAQPAEQELRRLREENERLRRELRAGPQEERALLRQLKEVTDRQRDELRAHNRDLRQ
                                     ..:: ....::::.:.::::.::..:.:  
XP_011                             MSERERQVMKKLKEVVDKQRDEIRAKDRELGL
                                           10        20        30  

        140       150       160       170               180        
pF1KE3 RGQETEALQEQLQRLLLVNAELRHKLAAMQTQLRA--------AQDRERERQQPGEAATP
       .....::::.:  ::. .: .:::.......: .:          : . ..:. :   . 
XP_011 KNEDVEALQQQQTRLMKINHDLRHRVTVVEAQGKALIEQKVELEADLQTKEQEMGSLRAE
             40        50        60        70        80        90  

      190       200       210       220       230       240        
pF1KE3 QAKERARGQAGRPGHQHGQEPEWATAGAGAPGNPEDPAEAAQQLGRPSEAGQCRFSREEF
        .: : : : :. ...  .:::   .:  . .. :  :   .. .::      ::. .:.
XP_011 LGKLRERLQ-GEHSQNGEEEPETEPVGEESISDAEKVAMDLKDPNRP------RFTLQEL
            100        110       120       130             140     

      250       260       270        280       290       300       
pF1KE3 EQILQERNELKAKVFLLKEELAYFQ-RELLTDHRVPGLLLEAMKVAVRKQRKKIKAKMLG
       ...:.::::::.:::::.:::::.. .:.  ..:.:                        
XP_011 RDVLHERNELKSKVFLLQEELAYYKSEEMEEENRIPQPPPIAHPRTSPQPESGIKRLKEG
         150       160       170       180       190       200     

       310       320       330       340       350       360       
pF1KE3 TPEEAESSEDEAGPWILLSDDKGDHPPPPESKIQSFFGLWYRGKAESSEDETSSPAPSKL
                                                                   
XP_011 PLSDGFSFFSRDKKRLANTQRNVHIQESFGQWANTHRDDGYTEQGQEALQHL        
         210       220       230       240       250               




401 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 08:50:25 2016 done: Sun Nov  6 08:50:26 2016
 Total Scan time:  9.100 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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