FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4471, 492 aa 1>>>pF1KE4471 492 - 492 aa - 492 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2328+/-0.00044; mu= 13.0092+/- 0.027 mean_var=77.6673+/-15.872, 0's: 0 Z-trim(110.2): 163 B-trim: 0 in 0/53 Lambda= 0.145531 statistics sampled from 18345 (18519) to 18345 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.562), E-opt: 0.2 (0.217), width: 16 Scan time: 5.270 The best scores are: opt bits E(85289) NP_000799 (OMIM: 305660) gamma-aminobutyric acid r ( 492) 3225 687.2 2.8e-197 XP_006724874 (OMIM: 305660) PREDICTED: gamma-amino ( 340) 2076 445.9 8.4e-125 NP_001158509 (OMIM: 137142) gamma-aminobutyric aci ( 462) 1913 411.7 2.2e-114 NP_000801 (OMIM: 137142) gamma-aminobutyric acid r ( 462) 1913 411.7 2.2e-114 XP_006720522 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 1913 411.7 2.2e-114 XP_005268315 (OMIM: 137142) PREDICTED: gamma-amino ( 462) 1913 411.7 2.2e-114 NP_001121116 (OMIM: 137160,611136,615744) gamma-am ( 456) 1907 410.5 5.3e-114 NP_001121115 (OMIM: 137160,611136,615744) gamma-am ( 456) 1907 410.5 5.3e-114 NP_001121117 (OMIM: 137160,611136,615744) gamma-am ( 456) 1907 410.5 5.3e-114 NP_001121120 (OMIM: 137160,611136,615744) gamma-am ( 456) 1907 410.5 5.3e-114 NP_000797 (OMIM: 137160,611136,615744) gamma-amino ( 456) 1907 410.5 5.3e-114 NP_001107647 (OMIM: 103780,137140) gamma-aminobuty ( 451) 1905 410.0 7e-114 XP_016863472 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 1905 410.0 7e-114 NP_000798 (OMIM: 103780,137140) gamma-aminobutyric ( 451) 1905 410.0 7e-114 XP_016863471 (OMIM: 103780,137140) PREDICTED: gamm ( 451) 1905 410.0 7e-114 XP_011511977 (OMIM: 103780,137140) PREDICTED: gamm ( 511) 1869 402.5 1.5e-111 NP_001317619 (OMIM: 103780,137140) gamma-aminobuty ( 511) 1869 402.5 1.5e-111 NP_000802 (OMIM: 137143) gamma-aminobutyric acid r ( 453) 1695 365.9 1.3e-100 NP_001191195 (OMIM: 137141) gamma-aminobutyric aci ( 535) 1644 355.3 2.6e-97 NP_000800 (OMIM: 137141) gamma-aminobutyric acid r ( 554) 1644 355.3 2.6e-97 XP_005248137 (OMIM: 103780,137140) PREDICTED: gamm ( 396) 1613 348.7 1.8e-95 NP_001273756 (OMIM: 103780,137140) gamma-aminobuty ( 456) 1577 341.2 3.8e-93 XP_016877544 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1465 317.6 3.2e-86 XP_016877545 (OMIM: 137142) PREDICTED: gamma-amino ( 306) 1465 317.6 3.2e-86 NP_944494 (OMIM: 137164,607681,611277) gamma-amino ( 475) 1253 273.1 1.2e-72 NP_150092 (OMIM: 600233) gamma-aminobutyric acid r ( 467) 1185 258.9 2.3e-68 NP_000807 (OMIM: 137164,607681,611277) gamma-amino ( 467) 1182 258.2 3.6e-68 NP_775807 (OMIM: 137166) gamma-aminobutyric acid r ( 465) 1173 256.3 1.3e-67 XP_011519732 (OMIM: 600233) PREDICTED: gamma-amino ( 473) 1129 247.1 8.1e-65 NP_001191196 (OMIM: 137141) gamma-aminobutyric aci ( 484) 989 217.7 5.8e-56 NP_004952 (OMIM: 300093) gamma-aminobutyric acid r ( 506) 973 214.4 6.2e-55 XP_016877548 (OMIM: 600233) PREDICTED: gamma-amino ( 355) 938 207.0 7.4e-53 NP_001139512 (OMIM: 138491,149400) glycine recepto ( 457) 937 206.8 1.1e-52 NP_006520 (OMIM: 600421) glycine receptor subunit ( 464) 920 203.2 1.3e-51 XP_016863479 (OMIM: 137166) PREDICTED: gamma-amino ( 336) 916 202.3 1.7e-51 XP_016864119 (OMIM: 600421) PREDICTED: glycine rec ( 424) 917 202.6 1.8e-51 XP_016877547 (OMIM: 600233) PREDICTED: gamma-amino ( 361) 891 197.1 7e-50 NP_001243632 (OMIM: 137161) gamma-aminobutyric aci ( 462) 859 190.4 9.2e-48 NP_068712 (OMIM: 137192,612269,617113) gamma-amino ( 473) 857 190.0 1.3e-47 NP_000805 (OMIM: 137192,612269,617113) gamma-amino ( 473) 856 189.8 1.5e-47 XP_011543797 (OMIM: 305990) PREDICTED: glycine rec ( 436) 847 187.9 5e-47 XP_006724550 (OMIM: 305990) PREDICTED: glycine rec ( 436) 847 187.9 5e-47 XP_011543798 (OMIM: 305990) PREDICTED: glycine rec ( 436) 847 187.9 5e-47 NP_002054 (OMIM: 305990) glycine receptor subunit ( 452) 847 187.9 5.2e-47 NP_001112357 (OMIM: 305990) glycine receptor subun ( 452) 847 187.9 5.2e-47 NP_000162 (OMIM: 138491,149400) glycine receptor s ( 449) 846 187.7 6e-47 XP_016864838 (OMIM: 138491,149400) PREDICTED: glyc ( 465) 846 187.7 6.1e-47 XP_016856425 (OMIM: 137163,613060) PREDICTED: gamm ( 687) 848 188.2 6.5e-47 NP_001036008 (OMIM: 600421) glycine receptor subun ( 449) 845 187.5 6.9e-47 XP_016884916 (OMIM: 305990) PREDICTED: glycine rec ( 452) 845 187.5 6.9e-47 >>NP_000799 (OMIM: 305660) gamma-aminobutyric acid recep (492 aa) initn: 3225 init1: 3225 opt: 3225 Z-score: 3662.7 bits: 687.2 E(85289): 2.8e-197 Smith-Waterman score: 3225; 99.8% identity (99.8% similar) in 492 aa overlap (1-492:1-492) 10 20 30 40 50 60 pF1KE4 MIITQTSHCYMTSLGILFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MIITQTSHCYMTSLGILFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 TDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 TWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 TWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 YTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 NQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 YFTKRSWAWEGKKVPEALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 YFTKRSWAWEGKKVPEALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 APSASSTPTIIASPKATYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 APSASSTPTIIASPKATYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVN 430 440 450 460 470 480 490 pF1KE4 RESAIKGMIRKQ :::::::::::: NP_000 RESAIKGMIRKQ 490 >>XP_006724874 (OMIM: 305660) PREDICTED: gamma-aminobuty (340 aa) initn: 2076 init1: 2076 opt: 2076 Z-score: 2361.6 bits: 445.9 E(85289): 8.4e-125 Smith-Waterman score: 2076; 99.7% identity (99.7% similar) in 310 aa overlap (1-310:1-310) 10 20 30 40 50 60 pF1KE4 MIITQTSHCYMTSLGILFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MIITQTSHCYMTSLGILFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 TDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TDNITIFTRILDRLLDGYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 TWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TWHDERLKFDGPMKILPLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 YTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YTMRLTIHAECPMHLEDFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 NQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 NQYDLLGHVVGTEIIRSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 RESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVN :::::::::: XP_006 RESVPARTVFEENTSSPSKENQHYLQHRGDHLSHQPGQGH 310 320 330 340 >>NP_001158509 (OMIM: 137142) gamma-aminobutyric acid re (462 aa) initn: 2114 init1: 1875 opt: 1913 Z-score: 2174.4 bits: 411.7 E(85289): 2.2e-114 Smith-Waterman score: 2112; 73.0% identity (87.8% similar) in 441 aa overlap (47-487:29-457) 20 30 40 50 60 70 pF1KE4 LFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLD :.: . .. :...::::::::::: ::: NP_001 MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLD 10 20 30 40 50 80 90 100 110 120 130 pF1KE4 GYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKIL :::::::::::. .:.:.::::::::::::::.:::::::::::.:.::::.: :::. : NP_001 GYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRL 60 70 80 90 100 110 140 150 160 170 180 190 pF1KE4 PLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLE :::::::::::::::::::::::.::::::::::::: :.::: ::::::: :::::.:: NP_001 PLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLE 120 130 140 150 160 170 200 210 220 230 240 250 pF1KE4 DFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIR :::::.:::::::::::: ..:::: :: :..::: ::.:::::::: :.:..:::: : NP_001 DFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENIS 180 190 200 210 220 230 260 270 280 290 300 310 pF1KE4 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL .:::::..::.::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 240 250 260 270 280 290 320 330 340 350 360 370 pF1KE4 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPE :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::. : NP_001 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALE 300 310 320 330 340 350 380 390 400 410 420 430 pF1KE4 ALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKA : ..::: . .:....:. ..: :. :. .:...:. : . : : NP_001 AAKIKKKREVI-LNKSTNAFTTGKMSHPPNIPKEQ---------TPAGTSNTTSV-SVKP 360 370 380 390 400 440 450 460 470 480 490 pF1KE4 TYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ . . : .. :::::.::.::.:::.:::::. :::::::::.::: .::: NP_001 SEEKTSESK-KTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK 410 420 430 440 450 460 >>NP_000801 (OMIM: 137142) gamma-aminobutyric acid recep (462 aa) initn: 2114 init1: 1875 opt: 1913 Z-score: 2174.4 bits: 411.7 E(85289): 2.2e-114 Smith-Waterman score: 2112; 73.0% identity (87.8% similar) in 441 aa overlap (47-487:29-457) 20 30 40 50 60 70 pF1KE4 LFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLD :.: . .. :...::::::::::: ::: NP_000 MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLD 10 20 30 40 50 80 90 100 110 120 130 pF1KE4 GYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKIL :::::::::::. .:.:.::::::::::::::.:::::::::::.:.::::.: :::. : NP_000 GYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRL 60 70 80 90 100 110 140 150 160 170 180 190 pF1KE4 PLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLE :::::::::::::::::::::::.::::::::::::: :.::: ::::::: :::::.:: NP_000 PLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLE 120 130 140 150 160 170 200 210 220 230 240 250 pF1KE4 DFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIR :::::.:::::::::::: ..:::: :: :..::: ::.:::::::: :.:..:::: : NP_000 DFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENIS 180 190 200 210 220 230 260 270 280 290 300 310 pF1KE4 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL .:::::..::.::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 TSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 240 250 260 270 280 290 320 330 340 350 360 370 pF1KE4 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPE :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::. : NP_000 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALE 300 310 320 330 340 350 380 390 400 410 420 430 pF1KE4 ALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKA : ..::: . .:....:. ..: :. :. .:...:. : . : : NP_000 AAKIKKKREVI-LNKSTNAFTTGKMSHPPNIPKEQ---------TPAGTSNTTSV-SVKP 360 370 380 390 400 440 450 460 470 480 490 pF1KE4 TYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ . . : .. :::::.::.::.:::.:::::. :::::::::.::: .::: NP_000 SEEKTSESK-KTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK 410 420 430 440 450 460 >>XP_006720522 (OMIM: 137142) PREDICTED: gamma-aminobuty (462 aa) initn: 2114 init1: 1875 opt: 1913 Z-score: 2174.4 bits: 411.7 E(85289): 2.2e-114 Smith-Waterman score: 2112; 73.0% identity (87.8% similar) in 441 aa overlap (47-487:29-457) 20 30 40 50 60 70 pF1KE4 LFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLD :.: . .. :...::::::::::: ::: XP_006 MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLD 10 20 30 40 50 80 90 100 110 120 130 pF1KE4 GYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKIL :::::::::::. .:.:.::::::::::::::.:::::::::::.:.::::.: :::. : XP_006 GYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRL 60 70 80 90 100 110 140 150 160 170 180 190 pF1KE4 PLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLE :::::::::::::::::::::::.::::::::::::: :.::: ::::::: :::::.:: XP_006 PLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLE 120 130 140 150 160 170 200 210 220 230 240 250 pF1KE4 DFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIR :::::.:::::::::::: ..:::: :: :..::: ::.:::::::: :.:..:::: : XP_006 DFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENIS 180 190 200 210 220 230 260 270 280 290 300 310 pF1KE4 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL .:::::..::.::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 TSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 240 250 260 270 280 290 320 330 340 350 360 370 pF1KE4 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPE :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::. : XP_006 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALE 300 310 320 330 340 350 380 390 400 410 420 430 pF1KE4 ALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKA : ..::: . .:....:. ..: :. :. .:...:. : . : : XP_006 AAKIKKKREVI-LNKSTNAFTTGKMSHPPNIPKEQ---------TPAGTSNTTSV-SVKP 360 370 380 390 400 440 450 460 470 480 490 pF1KE4 TYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ . . : .. :::::.::.::.:::.:::::. :::::::::.::: .::: XP_006 SEEKTSESK-KTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK 410 420 430 440 450 460 >>XP_005268315 (OMIM: 137142) PREDICTED: gamma-aminobuty (462 aa) initn: 2114 init1: 1875 opt: 1913 Z-score: 2174.4 bits: 411.7 E(85289): 2.2e-114 Smith-Waterman score: 2112; 73.0% identity (87.8% similar) in 441 aa overlap (47-487:29-457) 20 30 40 50 60 70 pF1KE4 LFLINILPGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLD :.: . .. :...::::::::::: ::: XP_005 MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLD 10 20 30 40 50 80 90 100 110 120 130 pF1KE4 GYDNRLRPGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKIL :::::::::::. .:.:.::::::::::::::.:::::::::::.:.::::.: :::. : XP_005 GYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRL 60 70 80 90 100 110 140 150 160 170 180 190 pF1KE4 PLNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLE :::::::::::::::::::::::.::::::::::::: :.::: ::::::: :::::.:: XP_005 PLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLE 120 130 140 150 160 170 200 210 220 230 240 250 pF1KE4 DFPMDVHACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIR :::::.:::::::::::: ..:::: :: :..::: ::.:::::::: :.:..:::: : XP_005 DFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENIS 180 190 200 210 220 230 260 270 280 290 300 310 pF1KE4 SSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL .:::::..::.::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVL 240 250 260 270 280 290 320 330 340 350 360 370 pF1KE4 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKVPE :::::::::::::::::::::::::::::::::::::::::::::::::.:::.:::. : XP_005 TMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALE 300 310 320 330 340 350 380 390 400 410 420 430 pF1KE4 ALEMKKKTPAAPAKKTSTTFNIVGTTYPINLAKDTEFSTISKGAAPSASSTPTIIASPKA : ..::: . .:....:. ..: :. :. .:...:. : . : : XP_005 AAKIKKKREVI-LNKSTNAFTTGKMSHPPNIPKEQ---------TPAGTSNTTSV-SVKP 360 370 380 390 400 440 450 460 470 480 490 pF1KE4 TYVQDSPTETKTYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ . . : .. :::::.::.::.:::.:::::. :::::::::.::: .::: XP_005 SEEKTSESK-KTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK 410 420 430 440 450 460 >>NP_001121116 (OMIM: 137160,611136,615744) gamma-aminob (456 aa) initn: 2041 init1: 1849 opt: 1907 Z-score: 2167.7 bits: 410.5 E(85289): 5.3e-114 Smith-Waterman score: 2083; 74.5% identity (86.0% similar) in 436 aa overlap (54-486:29-450) 30 40 50 60 70 80 pF1KE4 PGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLR :.. :. :: :.::::::::::::::::: NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLR 10 20 30 40 50 90 100 110 120 130 140 pF1KE4 PGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLA ::::. ::::::::.::::::::: ::::::::::::.:.:::::: ::: .: ::::.: NP_001 PGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMA 60 70 80 90 100 110 150 160 170 180 190 200 pF1KE4 SKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLEDFPMDVH :::::::::::::::::::::: ::::::....::: ::::::..:::::::::::::.: NP_001 SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAH 120 130 140 150 160 170 210 220 230 240 250 260 pF1KE4 ACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV :::::::::::: ::::: :: .:: ::.::::::::::::..: . :..::::::: NP_001 ACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYV 180 190 200 210 220 230 270 280 290 300 310 320 pF1KE4 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 240 250 260 270 280 290 330 340 350 360 370 380 pF1KE4 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKV-PEALEMKK ::::::::::::::::::::::::::::::::::::::::::..::.::.: :: : NP_001 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPE----KP 300 310 320 330 340 350 390 400 410 420 430 440 pF1KE4 KTPAAPAKKTSTTFNIVGTTYPINLAK-DTEFSTISKGAAPSASSTPTIIASPKATYVQD : : : ..:. ..:.: :::. : ..::.:.: :: :: . . NP_001 KKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSA--------TI--EPKEVKPET 360 370 380 390 400 450 460 470 480 490 pF1KE4 SPTETK-TYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ .: : : :.:::::.:..::: ::.::.::::::::::.::: .: NP_001 KPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ 410 420 430 440 450 >>NP_001121115 (OMIM: 137160,611136,615744) gamma-aminob (456 aa) initn: 2041 init1: 1849 opt: 1907 Z-score: 2167.7 bits: 410.5 E(85289): 5.3e-114 Smith-Waterman score: 2083; 74.5% identity (86.0% similar) in 436 aa overlap (54-486:29-450) 30 40 50 60 70 80 pF1KE4 PGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLR :.. :. :: :.::::::::::::::::: NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLR 10 20 30 40 50 90 100 110 120 130 140 pF1KE4 PGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLA ::::. ::::::::.::::::::: ::::::::::::.:.:::::: ::: .: ::::.: NP_001 PGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMA 60 70 80 90 100 110 150 160 170 180 190 200 pF1KE4 SKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLEDFPMDVH :::::::::::::::::::::: ::::::....::: ::::::..:::::::::::::.: NP_001 SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAH 120 130 140 150 160 170 210 220 230 240 250 260 pF1KE4 ACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV :::::::::::: ::::: :: .:: ::.::::::::::::..: . :..::::::: NP_001 ACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYV 180 190 200 210 220 230 270 280 290 300 310 320 pF1KE4 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 240 250 260 270 280 290 330 340 350 360 370 380 pF1KE4 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKV-PEALEMKK ::::::::::::::::::::::::::::::::::::::::::..::.::.: :: : NP_001 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPE----KP 300 310 320 330 340 350 390 400 410 420 430 440 pF1KE4 KTPAAPAKKTSTTFNIVGTTYPINLAK-DTEFSTISKGAAPSASSTPTIIASPKATYVQD : : : ..:. ..:.: :::. : ..::.:.: :: :: . . NP_001 KKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSA--------TI--EPKEVKPET 360 370 380 390 400 450 460 470 480 490 pF1KE4 SPTETK-TYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ .: : : :.:::::.:..::: ::.::.::::::::::.::: .: NP_001 KPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ 410 420 430 440 450 >>NP_001121117 (OMIM: 137160,611136,615744) gamma-aminob (456 aa) initn: 2041 init1: 1849 opt: 1907 Z-score: 2167.7 bits: 410.5 E(85289): 5.3e-114 Smith-Waterman score: 2083; 74.5% identity (86.0% similar) in 436 aa overlap (54-486:29-450) 30 40 50 60 70 80 pF1KE4 PGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLR :.. :. :: :.::::::::::::::::: NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLR 10 20 30 40 50 90 100 110 120 130 140 pF1KE4 PGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLA ::::. ::::::::.::::::::: ::::::::::::.:.:::::: ::: .: ::::.: NP_001 PGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMA 60 70 80 90 100 110 150 160 170 180 190 200 pF1KE4 SKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLEDFPMDVH :::::::::::::::::::::: ::::::....::: ::::::..:::::::::::::.: NP_001 SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAH 120 130 140 150 160 170 210 220 230 240 250 260 pF1KE4 ACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV :::::::::::: ::::: :: .:: ::.::::::::::::..: . :..::::::: NP_001 ACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYV 180 190 200 210 220 230 270 280 290 300 310 320 pF1KE4 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 240 250 260 270 280 290 330 340 350 360 370 380 pF1KE4 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKV-PEALEMKK ::::::::::::::::::::::::::::::::::::::::::..::.::.: :: : NP_001 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPE----KP 300 310 320 330 340 350 390 400 410 420 430 440 pF1KE4 KTPAAPAKKTSTTFNIVGTTYPINLAK-DTEFSTISKGAAPSASSTPTIIASPKATYVQD : : : ..:. ..:.: :::. : ..::.:.: :: :: . . NP_001 KKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSA--------TI--EPKEVKPET 360 370 380 390 400 450 460 470 480 490 pF1KE4 SPTETK-TYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ .: : : :.:::::.:..::: ::.::.::::::::::.::: .: NP_001 KPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ 410 420 430 440 450 >>NP_001121120 (OMIM: 137160,611136,615744) gamma-aminob (456 aa) initn: 2041 init1: 1849 opt: 1907 Z-score: 2167.7 bits: 410.5 E(85289): 5.3e-114 Smith-Waterman score: 2083; 74.5% identity (86.0% similar) in 436 aa overlap (54-486:29-450) 30 40 50 60 70 80 pF1KE4 PGTTGQGESRRQEPGDFVKQDIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLR :.. :. :: :.::::::::::::::::: NP_001 MRKSPGLSDCLWAWILLLSTLTGRSYGQPSLQDELKDNTTVFTRILDRLLDGYDNRLR 10 20 30 40 50 90 100 110 120 130 140 pF1KE4 PGLGDAVTEVKTDIYVTSFGPVSDTDMEYTIDVFFRQTWHDERLKFDGPMKILPLNNLLA ::::. ::::::::.::::::::: ::::::::::::.:.:::::: ::: .: ::::.: NP_001 PGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMA 60 70 80 90 100 110 150 160 170 180 190 200 pF1KE4 SKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLPYTMRLTIHAECPMHLEDFPMDVH :::::::::::::::::::::: ::::::....::: ::::::..:::::::::::::.: NP_001 SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAH 120 130 140 150 160 170 210 220 230 240 250 260 pF1KE4 ACPLKFGSYAYTTAEVVYSWTLGKNKSVEVAQDGSRLNQYDLLGHVVGTEIIRSSTGEYV :::::::::::: ::::: :: .:: ::.::::::::::::..: . :..::::::: NP_001 ACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYV 180 190 200 210 220 230 270 280 290 300 310 320 pF1KE4 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI 240 250 260 270 280 290 330 340 350 360 370 380 pF1KE4 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWEGKKV-PEALEMKK ::::::::::::::::::::::::::::::::::::::::::..::.::.: :: : NP_001 SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPE----KP 300 310 320 330 340 350 390 400 410 420 430 440 pF1KE4 KTPAAPAKKTSTTFNIVGTTYPINLAK-DTEFSTISKGAAPSASSTPTIIASPKATYVQD : : : ..:. ..:.: :::. : ..::.:.: :: :: . . NP_001 KKVKDPLIKKNNTYAPTATSYTPNLARGDPGLATIAKSA--------TI--EPKEVKPET 360 370 380 390 400 450 460 470 480 490 pF1KE4 SPTETK-TYNSVSKVDKISRIIFPVLFAIFNLVYWATYVNRESAIKGMIRKQ .: : : :.:::::.:..::: ::.::.::::::::::.::: .: NP_001 KPPEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ 410 420 430 440 450 492 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:28:57 2016 done: Sun Nov 6 00:28:58 2016 Total Scan time: 5.270 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]