Result of FASTA (omim) for pFN21AE4531
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4531, 594 aa
  1>>>pF1KE4531 594 - 594 aa - 594 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.7434+/-0.00039; mu= 4.9300+/- 0.024
 mean_var=231.0322+/-48.365, 0's: 0 Z-trim(120.3): 137  B-trim: 2048 in 1/54
 Lambda= 0.084380
 statistics sampled from 35154 (35328) to 35154 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.748), E-opt: 0.2 (0.414), width:  16
 Scan time: 12.210

The best scores are:                                      opt bits E(85289)
NP_058544 (OMIM: 605263) SHC-transforming protein  ( 594) 3976 497.1 6.6e-140
XP_011517087 (OMIM: 605263) PREDICTED: SHC-transfo ( 598) 3958 495.0  3e-139
XP_011517088 (OMIM: 605263) PREDICTED: SHC-transfo ( 452) 2778 351.2 4.3e-96
XP_016870299 (OMIM: 605263) PREDICTED: SHC-transfo ( 307) 1798 231.8 2.7e-60
XP_011508194 (OMIM: 600560) PREDICTED: SHC-transfo ( 593) 1398 183.3   2e-45
XP_016870298 (OMIM: 605263) PREDICTED: SHC-transfo ( 359) 1193 158.2 4.4e-38
NP_001123512 (OMIM: 600560) SHC-transforming prote ( 584) 1197 158.8 4.5e-38
NP_892113 (OMIM: 600560) SHC-transforming protein  ( 583) 1190 158.0 8.1e-38
XP_005245506 (OMIM: 600560) PREDICTED: SHC-transfo ( 598) 1190 158.0 8.3e-38
NP_003020 (OMIM: 600560) SHC-transforming protein  ( 474) 1181 156.8 1.5e-37
NP_001123513 (OMIM: 600560) SHC-transforming prote ( 473) 1174 156.0 2.7e-37
XP_005245508 (OMIM: 600560) PREDICTED: SHC-transfo ( 488) 1174 156.0 2.8e-37
NP_001189788 (OMIM: 600560) SHC-transforming prote ( 428) 1129 150.4 1.1e-35
XP_011508200 (OMIM: 600560) PREDICTED: SHC-transfo ( 432) 1068 143.0 1.9e-33
NP_036567 (OMIM: 605217) SHC-transforming protein  ( 582) 1027 138.1 7.6e-32
XP_011526195 (OMIM: 605217) PREDICTED: SHC-transfo ( 594) 1027 138.2 7.8e-32
XP_011526197 (OMIM: 605217) PREDICTED: SHC-transfo ( 537) 1019 137.1 1.4e-31
XP_011526196 (OMIM: 605217) PREDICTED: SHC-transfo ( 549) 1019 137.2 1.4e-31
XP_011508195 (OMIM: 600560) PREDICTED: SHC-transfo ( 592)  943 127.9 9.3e-29
XP_011526198 (OMIM: 605217) PREDICTED: SHC-transfo ( 437)  912 124.0   1e-27
XP_016882056 (OMIM: 605217) PREDICTED: SHC-transfo ( 437)  912 124.0   1e-27
XP_011508196 (OMIM: 600560) PREDICTED: SHC-transfo ( 575)  671 94.8 8.4e-19
XP_011508199 (OMIM: 600560) PREDICTED: SHC-transfo ( 465)  655 92.8 2.8e-18
XP_016857571 (OMIM: 600560) PREDICTED: SHC-transfo ( 565)  526 77.1 1.7e-13
XP_016857570 (OMIM: 600560) PREDICTED: SHC-transfo ( 566)  526 77.1 1.7e-13
XP_016857572 (OMIM: 600560) PREDICTED: SHC-transfo ( 455)  510 75.1 5.6e-13


>>NP_058544 (OMIM: 605263) SHC-transforming protein 3 [H  (594 aa)
 initn: 3976 init1: 3976 opt: 3976  Z-score: 2632.7  bits: 497.1 E(85289): 6.6e-140
Smith-Waterman score: 3976; 99.5% identity (99.8% similar) in 594 aa overlap (1-594:1-594)

               10        20        30        40        50        60
pF1KE4 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPVDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
NP_058 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPDDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRACHILECCDGLAQDVIGSIGQA
       ::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
NP_058 SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 FELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEGDGSDHPYYNSIPSKMPPPGGFLDTRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 FELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEGDGSDHPYYNSIPSKMPPPGGFLDTRL
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 KPRPHAPDTAQFAGKEQTYYQGRHLGDTFGEDWQQTPLRQGSSDIYSTPEGKLHVAPTGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 KPRPHAPDTAQFAGKEQTYYQGRHLGDTFGEDWQQTPLRQGSSDIYSTPEGKLHVAPTGE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 APTYVNTQQIPPQAWPAAVSSAESSPRKDLFDMKPFEDALKNQPLGPVLSKAASVECISP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 APTYVNTQQIPPQAWPAAVSSAESSPRKDLFDMKPFEDALKNQPLGPVLSKAASVECISP
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE4 VSPRAPDAKMLEELQAETWYQGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_058 VSPRAPDAKMLEELQAETWYQGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQ
              490       500       510       520       530       540

              550       560       570       580       590    
pF1KE4 AKHLLLVDPEGTIQTKDRVFDSISHLINHHLESSLPIVSAGSELCLQQPVERKQ
       :::::::::::::.::::::::::::::::::::::::::::::::::::::::
NP_058 AKHLLLVDPEGTIRTKDRVFDSISHLINHHLESSLPIVSAGSELCLQQPVERKQ
              550       560       570       580       590    

>>XP_011517087 (OMIM: 605263) PREDICTED: SHC-transformin  (598 aa)
 initn: 2699 init1: 2699 opt: 3958  Z-score: 2620.8  bits: 495.0 E(85289): 3e-139
Smith-Waterman score: 3958; 98.8% identity (99.2% similar) in 598 aa overlap (1-594:1-598)

               10        20        30        40        50        60
pF1KE4 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPVDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_011 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPDDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRACHILECCDGLAQDVIGSIGQA
       ::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::::
XP_011 SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRACHILECCDGLAQDVIGSIGQA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 FELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEGDGSDHPYYNSIPSKMPPPGGFLDTRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEGDGSDHPYYNSIPSKMPPPGGFLDTRL
              310       320       330       340       350       360

              370       380       390       400           410      
pF1KE4 KPRPHAPDTAQFAGKEQTYYQGRHLGDTFGEDWQQTPLRQG----SSDIYSTPEGKLHVA
       :::::::::::::::::::::::::::::::::::::::::    :::::::::::::::
XP_011 KPRPHAPDTAQFAGKEQTYYQGRHLGDTFGEDWQQTPLRQGERQGSSDIYSTPEGKLHVA
              370       380       390       400       410       420

        420       430       440       450       460       470      
pF1KE4 PTGEAPTYVNTQQIPPQAWPAAVSSAESSPRKDLFDMKPFEDALKNQPLGPVLSKAASVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 PTGEAPTYVNTQQIPPQAWPAAVSSAESSPRKDLFDMKPFEDALKNQPLGPVLSKAASVE
              430       440       450       460       470       480

        480       490       500       510       520       530      
pF1KE4 CISPVSPRAPDAKMLEELQAETWYQGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 CISPVSPRAPDAKMLEELQAETWYQGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGM
              490       500       510       520       530       540

        540       550       560       570       580       590    
pF1KE4 HNGQAKHLLLVDPEGTIQTKDRVFDSISHLINHHLESSLPIVSAGSELCLQQPVERKQ
       :::::::::::::::::.::::::::::::::::::::::::::::::::::::::::
XP_011 HNGQAKHLLLVDPEGTIRTKDRVFDSISHLINHHLESSLPIVSAGSELCLQQPVERKQ
              550       560       570       580       590        

>>XP_011517088 (OMIM: 605263) PREDICTED: SHC-transformin  (452 aa)
 initn: 1519 init1: 1519 opt: 2778  Z-score: 1846.1  bits: 351.2 E(85289): 4.3e-96
Smith-Waterman score: 2778; 98.6% identity (99.0% similar) in 417 aa overlap (182-594:36-452)

             160       170       180       190       200       210 
pF1KE4 GVTYVVKYLGCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSS
                                     ::::::::::::::::::::::::::::::
XP_011 KSPRGFPIPRTWPRLREAVWSGRWTLRKKGREAISRVCEAVPGAKGAFKKRKPPSKMLSS
          10        20        30        40        50        60     

             220       230       240       250       260       270 
pF1KE4 ILGKSNLQFAGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVT
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::.
XP_011 ILGKSNLQFAGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVA
          70        80        90       100       110       120     

             280       290       300       310       320       330 
pF1KE4 KDPVNRRACHILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLDEPWTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDPVNRRACHILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLDEPWTE
         130       140       150       160       170       180     

             340       350       360       370       380       390 
pF1KE4 EEGDGSDHPYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQFAGKEQTYYQGRHLGDTFGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 EEGDGSDHPYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQFAGKEQTYYQGRHLGDTFGE
         190       200       210       220       230       240     

             400           410       420       430       440       
pF1KE4 DWQQTPLRQG----SSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQAWPAAVSSAESSPR
       ::::::::::    ::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DWQQTPLRQGERQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQAWPAAVSSAESSPR
         250       260       270       280       290       300     

       450       460       470       480       490       500       
pF1KE4 KDLFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KDLFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRK
         310       320       330       340       350       360     

       510       520       530       540       550       560       
pF1KE4 EAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHLI
       ::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::
XP_011 EAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIRTKDRVFDSISHLI
         370       380       390       400       410       420     

       570       580       590    
pF1KE4 NHHLESSLPIVSAGSELCLQQPVERKQ
       :::::::::::::::::::::::::::
XP_011 NHHLESSLPIVSAGSELCLQQPVERKQ
         430       440       450  

>>XP_016870299 (OMIM: 605263) PREDICTED: SHC-transformin  (307 aa)
 initn: 1798 init1: 1798 opt: 1798  Z-score: 1203.6  bits: 231.8 E(85289): 2.7e-60
Smith-Waterman score: 1798; 99.3% identity (99.6% similar) in 278 aa overlap (1-278:1-278)

               10        20        30        40        50        60
pF1KE4 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPVDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPDDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSISLTISTASLNLRTPD
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 SKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRACHILECCDGLAQDVIGSIGQA
       ::::::::::::::::::::::::::::::.:::::::                      
XP_016 SKQIIANHHMRSISFASGGDPDTTDYVAYVAKDPVNRRGSRWSGGMTFAGRRAPFNPLQS
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 FELRFKQYLQCPTKIPALHDRMQSLDEPWTEEEGDGSDHPYYNSIPSKMPPPGGFLDTRL
                                                                   
XP_016 LSHFGML                                                     
                                                                   

>>XP_011508194 (OMIM: 600560) PREDICTED: SHC-transformin  (593 aa)
 initn: 1613 init1: 927 opt: 1398  Z-score: 936.7  bits: 183.3 E(85289): 2e-45
Smith-Waterman score: 1666; 48.1% identity (67.8% similar) in 628 aa overlap (3-593:6-592)

                  10        20        30        40        50       
pF1KE4    MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAP
            :. ::: .::.:..:...        :..:..   .    .:  :  :  :   :
XP_011 MDLLPPKPKYNPLRNESLSSLEE--------GASGSTPPEELPSPSASSL--GPILPPLP
               10        20                30        40          50

         60        70         80        90       100        110    
pF1KE4 VD-GPGSLGHLLHKVSHLKLSS-SGLRGLSSAARERAGARLSGSCSAPSLAAPD-GSAPS
        : .: .:  .. ..:.:.:.. .: :  :..   ::.    :  .:   : :: :  : 
XP_011 GDDSPTTLCSFFPRMSNLRLANPAGGRPGSKGEPGRAADDGEGIVGA---AMPDSGPLPL
               60        70        80        90          100       

          120              130              140       150       160
pF1KE4 APRAPAMSAA--RK-----GRPGDEPLPR-------PPRGAPHASDQVLGPGVTYVVKYL
             .:..  :.     :. : :   :       : ::  : .:.:.::::.:.:.:.
XP_011 LQDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYM
       110       120       130       140       150       160       

              170       180       190       200       210       220
pF1KE4 GCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQF
       ::.:::.:::.:::.::::.:::::: ::::::::::: ..::: :. ::::::.:::.:
XP_011 GCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKF
       170       180       190       200       210       220       

              230       240       250       260       270       280
pF1KE4 AGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRAC
       ::: :.::.::.:::: . : :::::::::.::::::::::::..:::::.:::::.:::
XP_011 AGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRAC
       230       240       250       260       270       280       

              290       300       310       320                 330
pF1KE4 HILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHD---------RMQSLD-EPWT
       ::::: .:::::::..:::::::::::::. : :. . ::         :: ..:   : 
XP_011 HILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDSHSFTVLSLRMAGFDGSAWD
       290       300       310       320       330       340       

              340       350       360       370        380         
pF1KE4 EEEGDGSDHPYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQ-FAGKEQTYYQGRHLGDTF
       ::: .  :: :::..:.: :: :: .: ::. .  :: .:.  : . ::     ::: :.
XP_011 EEEEEPPDHQYYNDFPGKEPPLGGVVDMRLR-EGAAPGAARPTAPNAQT---PSHLGATL
       350       360       370        380       390          400   

       390        400       410       420       430             440
pF1KE4 --GEDWQQTP-LRQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQ------AWPAAVS
         :.     : .:.        : :.       . :.:::.:..         : :   .
XP_011 PVGQPVGGDPEVRKQMPPPPPCPAGR----ELFDDPSYVNVQNLDKARQAVGGAGPPNPA
           410       420           430       440       450         

              450       460       470       480       490       500
pF1KE4 SAESSPRKDLFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWY
          :.:: ::::::::::::.                   : :   ...: :.:..: :.
XP_011 INGSAPR-DLFDMKPFEDALR-------------------VPPPPQSVSMAEQLRGEPWF
     460        470                          480       490         

              510       520       530       540       550       560
pF1KE4 QGEMSRKEAEGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVF
       .:..::.:::.::. .::::::.:::.::..::::...:: ::::::::::...:::. :
XP_011 HGKLSRREAEALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRF
     500       510       520       530       540       550         

              570       580       590    
pF1KE4 DSISHLINHHLESSLPIVSAGSELCLQQPVERKQ
       .:.::::..:... :::.::::::::::::::: 
XP_011 ESVSHLISYHMDNHLPIISAGSELCLQQPVERKL
     560       570       580       590   

>>XP_016870298 (OMIM: 605263) PREDICTED: SHC-transformin  (359 aa)
 initn: 1211 init1: 1187 opt: 1193  Z-score: 804.7  bits: 158.2 E(85289): 4.4e-38
Smith-Waterman score: 1193; 87.9% identity (92.6% similar) in 215 aa overlap (1-210:1-215)

               10        20        30        40        50        60
pF1KE4 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPVDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::
XP_016 MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAPDDG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PGSLGHLLHKVSHLKLSSSGLRGLSSAARERAGARLSGSCSAPSLAAPDGSAPSAPRAPA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEVLRSMRSLDFSTRTQI
              130       140       150       160       170       180

                 190        200        210       220       230     
pF1KE4 TR---EAISRVCEAVP-GAKGAFKK-RKPPSKMLSSILGKSNLQFAGMSISLTISTASLN
       ::   :.....   :  : . ...  ::  :: .:                         
XP_016 TRVHLEGLAKLSSQVTSGFQHSINALRKQKSKRISYPQDLAQAERSCVEWKMDIEEEGQV
              190       200       210       220       230       240

         240       250       260       270       280       290     
pF1KE4 LRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRACHILECCDGLAQDVIG
                                                                   
XP_016 WSHPEWFLLLPRCPGFSHGLCWVLPWVLWMHPACWKFCALCFHPFVVVMTVYLSPVPSSA
              250       260       270       280       290       300

>>NP_001123512 (OMIM: 600560) SHC-transforming protein 1  (584 aa)
 initn: 1524 init1: 960 opt: 1197  Z-score: 804.5  bits: 158.8 E(85289): 4.5e-38
Smith-Waterman score: 1694; 48.8% identity (68.8% similar) in 619 aa overlap (3-593:6-583)

                  10        20        30        40        50       
pF1KE4    MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAP
            :. ::: .::.:..:...        :..:..   .    .:  :  :  :   :
NP_001 MDLLPPKPKYNPLRNESLSSLEE--------GASGSTPPEELPSPSASSL--GPILPPLP
               10        20                30        40          50

         60        70         80        90       100        110    
pF1KE4 VD-GPGSLGHLLHKVSHLKLSS-SGLRGLSSAARERAGARLSGSCSAPSLAAPD-GSAPS
        : .: .:  .. ..:.:.:.. .: :  :..   ::.    :  .:   : :: :  : 
NP_001 GDDSPTTLCSFFPRMSNLRLANPAGGRPGSKGEPGRAADDGEGIVGA---AMPDSGPLPL
               60        70        80        90          100       

          120              130              140       150       160
pF1KE4 APRAPAMSAA--RK-----GRPGDEPLPR-------PPRGAPHASDQVLGPGVTYVVKYL
             .:..  :.     :. : :   :       : ::  : .:.:.::::.:.:.:.
NP_001 LQDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYM
       110       120       130       140       150       160       

              170       180       190       200       210       220
pF1KE4 GCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQF
       ::.:::.:::.:::.::::.:::::: ::::::::::: ..::: :. ::::::.:::.:
NP_001 GCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKF
       170       180       190       200       210       220       

              230       240       250       260       270       280
pF1KE4 AGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRAC
       ::: :.::.::.:::: . : :::::::::.::::::::::::..:::::.:::::.:::
NP_001 AGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRAC
       230       240       250       260       270       280       

              290       300       310       320        330         
pF1KE4 HILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLD-EPWTEEEGDGSDH
       ::::: .:::::::..:::::::::::::. : :. . :::: ..:   : ::: .  ::
NP_001 HILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDH
       290       300       310       320       330       340       

     340       350       360       370        380         390      
pF1KE4 PYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQ-FAGKEQTYYQGRHLGDTF--GEDWQQT
        :::..:.: :: :: .: ::. .  :: .:.  : . ::     ::: :.  :.     
NP_001 QYYNDFPGKEPPLGGVVDMRLR-EGAAPGAARPTAPNAQT---PSHLGATLPVGQPVGGD
       350       360        370       380          390       400   

         400       410       420       430             440         
pF1KE4 P-LRQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQ------AWPAAVSSAESSPRKD
       : .:.        : :.       . :.:::.:..         : :   .   :.:: :
NP_001 PEVRKQMPPPPPCPAGR----ELFDDPSYVNVQNLDKARQAVGGAGPPNPAINGSAPR-D
           410       420           430       440       450         

     450       460       470       480       490       500         
pF1KE4 LFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRKEA
       :::::::::::.                   : :   ...: :.:..: :..:..::.::
NP_001 LFDMKPFEDALR-------------------VPPPPQSVSMAEQLRGEPWFHGKLSRREA
      460       470                          480       490         

     510       520       530       540       550       560         
pF1KE4 EGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHLINH
       :.::. .::::::.:::.::..::::...:: ::::::::::...:::. :.:.::::..
NP_001 EALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISY
     500       510       520       530       540       550         

     570       580       590    
pF1KE4 HLESSLPIVSAGSELCLQQPVERKQ
       :... :::.::::::::::::::: 
NP_001 HMDNHLPIISAGSELCLQQPVERKL
     560       570       580    

>>NP_892113 (OMIM: 600560) SHC-transforming protein 1 is  (583 aa)
 initn: 1441 init1: 960 opt: 1190  Z-score: 799.9  bits: 158.0 E(85289): 8.1e-38
Smith-Waterman score: 1687; 48.8% identity (68.8% similar) in 619 aa overlap (3-593:6-582)

                  10        20        30        40        50       
pF1KE4    MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAP
            :. ::: .::.:..:...        :..:..   .    .:  :  :  :   :
NP_892 MDLLPPKPKYNPLRNESLSSLEE--------GASGSTPPEELPSPSASSL--GPILPPLP
               10        20                30        40          50

         60        70         80        90       100        110    
pF1KE4 VD-GPGSLGHLLHKVSHLKLSS-SGLRGLSSAARERAGARLSGSCSAPSLAAPD-GSAPS
        : .: .:  .. ..:.:.:.. .: :  :..   ::.    :  .:   : :: :  : 
NP_892 GDDSPTTLCSFFPRMSNLRLANPAGGRPGSKGEPGRAADDGEGIVGA---AMPDSGPLPL
               60        70        80        90          100       

          120              130              140       150       160
pF1KE4 APRAPAMSAA--RK-----GRPGDEPLPR-------PPRGAPHASDQVLGPGVTYVVKYL
             .:..  :.     :. : :   :       : ::  : .:.:.::::.:.:.:.
NP_892 LQDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYM
       110       120       130       140       150       160       

              170       180       190       200       210       220
pF1KE4 GCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQF
       ::.:::.:::.:::.::::.:::::: ::::::::::: ..::: :. ::::::.:::.:
NP_892 GCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKF
       170       180       190       200       210       220       

              230       240       250       260       270       280
pF1KE4 AGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRAC
       ::: :.::.::.:::: . : :::::::::.::::::::::::..:::::.:::::.:::
NP_892 AGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRAC
       230       240       250       260       270       280       

              290       300       310       320        330         
pF1KE4 HILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLD-EPWTEEEGDGSDH
       ::::: .:::::::..:::::::::::::. : :. . :::: ..:   : ::: .  ::
NP_892 HILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDH
       290       300       310       320       330       340       

     340       350       360       370        380         390      
pF1KE4 PYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQ-FAGKEQTYYQGRHLGDTF--GEDWQQT
        :::..:.: :: :: .: ::. .  :: .:.  : . ::     ::: :.  :.     
NP_892 QYYNDFPGKEPPLGGVVDMRLR-EGAAPGAARPTAPNAQT---PSHLGATLPVGQPVGGD
       350       360        370       380          390       400   

         400       410       420       430             440         
pF1KE4 P-LRQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQ------AWPAAVSSAESSPRKD
       : .:.        :  .:      . :.:::.:..         : :   .   :.:: :
NP_892 PEVRKQMPPPPPCPGRELF-----DDPSYVNVQNLDKARQAVGGAGPPNPAINGSAPR-D
           410       420            430       440       450        

     450       460       470       480       490       500         
pF1KE4 LFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRKEA
       :::::::::::.                   : :   ...: :.:..: :..:..::.::
NP_892 LFDMKPFEDALR-------------------VPPPPQSVSMAEQLRGEPWFHGKLSRREA
       460                          470       480       490        

     510       520       530       540       550       560         
pF1KE4 EGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHLINH
       :.::. .::::::.:::.::..::::...:: ::::::::::...:::. :.:.::::..
NP_892 EALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISY
      500       510       520       530       540       550        

     570       580       590    
pF1KE4 HLESSLPIVSAGSELCLQQPVERKQ
       :... :::.::::::::::::::: 
NP_892 HMDNHLPIISAGSELCLQQPVERKL
      560       570       580   

>>XP_005245506 (OMIM: 600560) PREDICTED: SHC-transformin  (598 aa)
 initn: 1239 init1: 960 opt: 1190  Z-score: 799.8  bits: 158.0 E(85289): 8.3e-38
Smith-Waterman score: 1485; 47.0% identity (67.1% similar) in 583 aa overlap (3-557:6-546)

                  10        20        30        40        50       
pF1KE4    MLPRTKYNRFRNDSVTSVDDLLHSLSVSGGGGKVSAARATPAAAPYLVSGEALRKAP
            :. ::: .::.:..:...        :..:..   .    .:  :  :  :   :
XP_005 MDLLPPKPKYNPLRNESLSSLEE--------GASGSTPPEELPSPSASSL--GPILPPLP
               10        20                30        40          50

         60        70         80        90       100        110    
pF1KE4 VD-GPGSLGHLLHKVSHLKLSS-SGLRGLSSAARERAGARLSGSCSAPSLAAPD-GSAPS
        : .: .:  .. ..:.:.:.. .: :  :..   ::.    :  .:   : :: :  : 
XP_005 GDDSPTTLCSFFPRMSNLRLANPAGGRPGSKGEPGRAADDGEGIVGA---AMPDSGPLPL
               60        70        80        90          100       

          120              130              140       150       160
pF1KE4 APRAPAMSAA--RK-----GRPGDEPLPR-------PPRGAPHASDQVLGPGVTYVVKYL
             .:..  :.     :. : :   :       : ::  : .:.:.::::.:.:.:.
XP_005 LQDMNKLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYM
       110       120       130       140       150       160       

              170       180       190       200       210       220
pF1KE4 GCIEVLRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQF
       ::.:::.:::.:::.::::.:::::: ::::::::::: ..::: :. ::::::.:::.:
XP_005 GCVEVLQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKF
       170       180       190       200       210       220       

              230       240       250       260       270       280
pF1KE4 AGMSISLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRAC
       ::: :.::.::.:::: . : :::::::::.::::::::::::..:::::.:::::.:::
XP_005 AGMPITLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRAC
       230       240       250       260       270       280       

              290       300       310       320        330         
pF1KE4 HILECCDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLD-EPWTEEEGDGSDH
       ::::: .:::::::..:::::::::::::. : :. . :::: ..:   : ::: .  ::
XP_005 HILECPEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDH
       290       300       310       320       330       340       

     340       350       360       370        380         390      
pF1KE4 PYYNSIPSKMPPPGGFLDTRLKPRPHAPDTAQ-FAGKEQTYYQGRHLGDTF--GEDWQQT
        :::..:.: :: :: .: ::. .  :: .:.  : . ::     ::: :.  :.     
XP_005 QYYNDFPGKEPPLGGVVDMRLR-EGAAPGAARPTAPNAQT---PSHLGATLPVGQPVGGD
       350       360        370       380          390       400   

         400       410       420       430             440         
pF1KE4 P-LRQGSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQ------AWPAAVSSAESSPRKD
       : .:.        :  .:      . :.:::.:..         : :   .   :.:: :
XP_005 PEVRKQMPPPPPCPGRELF-----DDPSYVNVQNLDKARQAVGGAGPPNPAINGSAPR-D
           410       420            430       440       450        

     450       460       470       480       490       500         
pF1KE4 LFDMKPFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRKEA
       :::::::::::.                   : :   ...: :.:..: :..:..::.::
XP_005 LFDMKPFEDALR-------------------VPPPPQSVSMAEQLRGEPWFHGKLSRREA
       460                          470       480       490        

     510       520       530       540       550       560         
pF1KE4 EGLLEKDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHLINH
       :.::. .::::::.:::.::..::::...:: ::::::::::.... .            
XP_005 EALLQLNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVSVAEVWVRGGKKEGTV
      500       510       520       530       540       550        

     570       580       590                   
pF1KE4 HLESSLPIVSAGSELCLQQPVERKQ               
                                               
XP_005 PYSVSLFLPSLLCRHSRWAAVYGPLLLFKVSGIFLQRLIP
      560       570       580       590        

>>NP_003020 (OMIM: 600560) SHC-transforming protein 1 is  (474 aa)
 initn: 1550 init1: 960 opt: 1181  Z-score: 795.2  bits: 156.8 E(85289): 1.5e-37
Smith-Waterman score: 1631; 56.1% identity (75.5% similar) in 469 aa overlap (136-593:33-473)

         110       120       130       140       150       160     
pF1KE4 AAPDGSAPSAPRAPAMSAARKGRPGDEPLPRPPRGAPHASDQVLGPGVTYVVKYLGCIEV
                                     .: ::  : .:.:.::::.:.:.:.::.::
NP_003 KLSGGGGRRTRVEGGQLGGEEWTRHGSFVNKPTRGWLHPNDKVMGPGVSYLVRYMGCVEV
             10        20        30        40        50        60  

         170       180       190       200       210       220     
pF1KE4 LRSMRSLDFSTRTQITREAISRVCEAVPGAKGAFKKRKPPSKMLSSILGKSNLQFAGMSI
       :.:::.:::.::::.:::::: ::::::::::: ..::: :. ::::::.:::.:::: :
NP_003 LQSMRALDFNTRTQVTREAISLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPI
             70        80        90       100       110       120  

         230       240       250       260       270       280     
pF1KE4 SLTISTASLNLRTPDSKQIIANHHMRSISFASGGDPDTTDYVAYVTKDPVNRRACHILEC
       .::.::.:::: . : :::::::::.::::::::::::..:::::.:::::.::::::::
NP_003 TLTVSTSSLNLMAADCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILEC
            130       140       150       160       170       180  

         290       300       310       320        330       340    
pF1KE4 CDGLAQDVIGSIGQAFELRFKQYLQCPTKIPALHDRMQSLD-EPWTEEEGDGSDHPYYNS
        .:::::::..:::::::::::::. : :. . :::: ..:   : ::: .  :: :::.
NP_003 PEGLAQDVISTIGQAFELRFKQYLRNPPKLVTPHDRMAGFDGSAWDEEEEEPPDHQYYND
            190       200       210       220       230       240  

          350       360       370        380         390        400
pF1KE4 IPSKMPPPGGFLDTRLKPRPHAPDTAQ-FAGKEQTYYQGRHLGDTF--GEDWQQTP-LRQ
       .:.: :: :: .: ::. .  :: .:.  : . ::     ::: :.  :.     : .:.
NP_003 FPGKEPPLGGVVDMRLR-EGAAPGAARPTAPNAQT---PSHLGATLPVGQPVGGDPEVRK
            250        260       270          280       290        

              410       420       430             440       450    
pF1KE4 GSSDIYSTPEGKLHVAPTGEAPTYVNTQQIPPQ------AWPAAVSSAESSPRKDLFDMK
               : :.       . :.:::.:..         : :   .   :.:: ::::::
NP_003 QMPPPPPCPAGR----ELFDDPSYVNVQNLDKARQAVGGAGPPNPAINGSAPR-DLFDMK
      300       310           320       330       340        350   

          460       470       480       490       500       510    
pF1KE4 PFEDALKNQPLGPVLSKAASVECISPVSPRAPDAKMLEELQAETWYQGEMSRKEAEGLLE
       ::::::.                   : :   ...: :.:..: :..:..::.:::.::.
NP_003 PFEDALR-------------------VPPPPQSVSMAEQLRGEPWFHGKLSRREAEALLQ
           360                          370       380       390    

          520       530       540       550       560       570    
pF1KE4 KDGDFLVRKSTTNPGSFVLTGMHNGQAKHLLLVDPEGTIQTKDRVFDSISHLINHHLESS
        .::::::.:::.::..::::...:: ::::::::::...:::. :.:.::::..:... 
NP_003 LNGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNH
          400       410       420       430       440       450    

          580       590    
pF1KE4 LPIVSAGSELCLQQPVERKQ
       :::.::::::::::::::: 
NP_003 LPIISAGSELCLQQPVERKL
          460       470    




594 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 00:12:20 2016 done: Sun Nov  6 00:12:22 2016
 Total Scan time: 12.210 Total Display time:  0.120

Function used was FASTA [36.3.4 Apr, 2011]
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