Result of FASTA (omim) for pFN21AE1344
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1344, 560 aa
  1>>>pF1KE1344 560 - 560 aa - 560 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6836+/-0.000365; mu= 12.7634+/- 0.023
 mean_var=99.9060+/-19.984, 0's: 0 Z-trim(115.5): 25  B-trim: 0 in 0/54
 Lambda= 0.128315
 statistics sampled from 25926 (25949) to 25926 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.671), E-opt: 0.2 (0.304), width:  16
 Scan time: 11.140

The best scores are:                                      opt bits E(85289)
NP_001245 (OMIM: 602627,613805) cell division cont ( 560) 3658 687.8 2.4e-197
XP_011523844 (OMIM: 602627,613805) PREDICTED: cell ( 600) 2634 498.2  3e-140
XP_011523843 (OMIM: 602627,613805) PREDICTED: cell ( 600) 2634 498.2  3e-140
NP_001177748 (OMIM: 224690,601902) origin recognit ( 856)  531 109.0 6.3e-23
XP_011539829 (OMIM: 224690,601902) PREDICTED: orig ( 501)  516 106.1 2.7e-22
XP_016856878 (OMIM: 224690,601902) PREDICTED: orig ( 615)  516 106.2 3.2e-22
NP_004144 (OMIM: 224690,601902) origin recognition ( 861)  516 106.2 4.3e-22
NP_001177747 (OMIM: 224690,601902) origin recognit ( 861)  516 106.2 4.3e-22
XP_016856877 (OMIM: 224690,601902) PREDICTED: orig ( 825)  206 48.8 7.9e-05


>>NP_001245 (OMIM: 602627,613805) cell division control   (560 aa)
 initn: 3658 init1: 3658 opt: 3658  Z-score: 3663.9  bits: 687.8 E(85289): 2.4e-197
Smith-Waterman score: 3658; 99.8% identity (100.0% similar) in 560 aa overlap (1-560:1-560)

               10        20        30        40        50        60
pF1KE1 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE1 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECKSP
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE1 SEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEV
       ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::
NP_001 SEPLIPKRVGLIHISQVISEVDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEV
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KE1 TLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKE
              490       500       510       520       530       540

              550       560
pF1KE1 IEHALKDKALIGNILATGLP
       ::::::::::::::::::::
NP_001 IEHALKDKALIGNILATGLP
              550       560

>>XP_011523844 (OMIM: 602627,613805) PREDICTED: cell div  (600 aa)
 initn: 2633 init1: 2633 opt: 2634  Z-score: 2639.0  bits: 498.2 E(85289): 3e-140
Smith-Waterman score: 3518; 93.1% identity (93.2% similar) in 592 aa overlap (1-552:1-592)

               10        20        30        40        50        60
pF1KE1 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
              310       320       330       340       350       360

              370       380       390                              
pF1KE1 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCR-------------------------
       :::::::::::::::::::::::::::::::::::                         
XP_011 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRKEDLFLSGELWISTVLMSETLSVHY
              370       380       390       400       410       420

                        400       410       420       430       440
pF1KE1 ---------------RAIEIVESDVKSQTILKPLSECKSPSEPLIPKRVGLIHISQVISE
                      :::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQREKQMRCCWHSLWRAIEIVESDVKSQTILKPLSECKSPSEPLIPKRVGLIHISQVISE
              430       440       450       460       470       480

              450       460       470       480       490       500
pF1KE1 IDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEAYSKVCRKQQVAA
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEAYSKVCRKQQVAA
              490       500       510       520       530       540

              510       520       530       540       550       560
pF1KE1 VDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKEIEHALKDKALIGNILATGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
XP_011 VDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKEIEHALKDKALIGNILATGLP
              550       560       570       580       590       600

>>XP_011523843 (OMIM: 602627,613805) PREDICTED: cell div  (600 aa)
 initn: 2633 init1: 2633 opt: 2634  Z-score: 2639.0  bits: 498.2 E(85289): 3e-140
Smith-Waterman score: 3518; 93.1% identity (93.2% similar) in 592 aa overlap (1-552:1-592)

               10        20        30        40        50        60
pF1KE1 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MPQTRSQAQATISFPKRKLSRALNKAKNSSDAKLEPTNVQTVTCSPRVKALPLSPRKRLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DDNLCNTPHLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LSSVRKSQEITTNSEQRCPLKKESACVRLFKQEGTCYQQAKLVLNTAVPDRLPAREREMD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTAQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE1 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 AVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYTL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE1 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FEWPWLSNSHLVLIGIANTLDLTDRILPRLQAREKCKPQLLNFPPYTRNQIVTILQDRLN
              310       320       330       340       350       360

              370       380       390                              
pF1KE1 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCR-------------------------
       :::::::::::::::::::::::::::::::::::                         
XP_011 QVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRKEDLFLSGELWISTVLMSETLSVHY
              370       380       390       400       410       420

                        400       410       420       430       440
pF1KE1 ---------------RAIEIVESDVKSQTILKPLSECKSPSEPLIPKRVGLIHISQVISE
                      :::::::::::::::::::::::::::::::::::::::::::::
XP_011 LQREKQMRCCWHSLWRAIEIVESDVKSQTILKPLSECKSPSEPLIPKRVGLIHISQVISE
              430       440       450       460       470       480

              450       460       470       480       490       500
pF1KE1 IDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEAYSKVCRKQQVAA
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIKEVTLGKLYEAYSKVCRKQQVAA
              490       500       510       520       530       540

              510       520       530       540       550       560
pF1KE1 VDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKEIEHALKDKALIGNILATGLP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::        
XP_011 VDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEEKEIEHALKDKALIGNILATGLP
              550       560       570       580       590       600

>>NP_001177748 (OMIM: 224690,601902) origin recognition   (856 aa)
 initn: 353 init1: 167 opt: 531  Z-score: 532.6  bits: 109.0 E(85289): 6.3e-23
Smith-Waterman score: 613; 28.5% identity (63.1% similar) in 463 aa overlap (99-548:422-856)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
NP_001 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
             400       410       420       430       440       450 

      130       140          150        160        170       180   
pF1KE1 EITTNSEQRCPLKKESACVR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREMDVIR
       .  :. . : : .  .  .:   :  :: ..  ..:.: :. .:::. :: ::.:.. : 
NP_001 HTLTKLKPRTP-RCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEFQDIY
             460        470       480       490       500       510

           190       200       210       220            230        
pF1KE1 NFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKK-----ELKGFKTIMLNCMSLRT
       ::.. ..  . .: .:.::.::::::: . .... :..     ..  :. : .: :.:  
NP_001 NFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGMKLTE
              520       530       540       550       560       570

      240       250       260       270         280       290      
pF1KE1 AQAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPM--IVLVLDEMDQLDSKGQDV
        . :.  : :..  ....   . ..   : :.. .. .:.   ::..::.: : .. ::.
NP_001 PHQVYVQILQKLTGQKATANHAAEL---LAKQFCTRGSPQETTVLLVDELDLLWTHKQDI
              580       590          600       610       620       

        300       310       320        330       340       350     
pF1KE1 LYTLFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQIVTIL
       .:.::.::  ....::...::::.:: .::.  :...:       . : ::: .:.  ::
NP_001 MYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQLQQIL
       630       640       650       660       670         680     

         360       370       380       390       400       410     
pF1KE1 QDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLS
       ..::...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::       
NP_001 RSRLKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ-------
         690          700       710       720       730            

         420       430       440       450       460       470     
pF1KE1 ECKSPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQL
         ..:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  .:. 
NP_001 --QKPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAEFRRS
                    740       750       760       770        780   

         480       490       500       510       520       530     
pF1KE1 KIKEVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFK
        ..:.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .: ..
NP_001 GLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLRVRLN
           790       800       810       820       830       840   

         540       550       560
pF1KE1 IEEKEIEHALKDKALIGNILATGLP
       . . .. .::::.            
NP_001 VSQDDVLYALKDE            
           850                  

>>XP_011539829 (OMIM: 224690,601902) PREDICTED: origin r  (501 aa)
 initn: 404 init1: 167 opt: 516  Z-score: 521.2  bits: 106.1 E(85289): 2.7e-22
Smith-Waterman score: 603; 28.1% identity (62.3% similar) in 467 aa overlap (99-548:62-501)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
XP_011 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
              40        50        60        70        80        90 

      130       140              150        160        170         
pF1KE1 EITTNSEQRCPLKKESAC----VR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREM
       .  :.  ..    .   :    .:   :  :: ..  ..:.: :. .:::. :: ::.:.
XP_011 HTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEF
             100       110       120       130       140       150 

     180       190       200       210       220            230    
pF1KE1 DVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKK-----ELKGFKTIMLNCM
       . : ::.. ..  . .: .:.::.::::::: . .... :..     ..  :. : .: :
XP_011 QDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGM
             160       170       180       190       200       210 

          240       250       260       270         280       290  
pF1KE1 SLRTAQAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPM--IVLVLDEMDQLDSK
       .:   . :.  : :..  ....   . ..   : :.. .. .:.   ::..::.: : ..
XP_011 KLTEPHQVYVQILQKLTGQKATANHAAEL---LAKQFCTRGSPQETTVLLVDELDLLWTH
             220       230       240          250       260        

            300       310       320        330       340       350 
pF1KE1 GQDVLYTLFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQI
        ::..:.::.::  ....::...::::.:: .::.  :...:       . : ::: .:.
XP_011 KQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQL
      270       280       290       300       310         320      

             360       370       380       390       400       410 
pF1KE1 VTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTIL
         ::..::...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::   
XP_011 QQILRSRLKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ---
        330          340       350       360       370             

             420       430       440       450       460       470 
pF1KE1 KPLSECKSPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLL
             ..:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  
XP_011 ------QKPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAE
             380             390       400       410        420    

             480       490       500       510       520       530 
pF1KE1 IRQLKIKEVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTK
       .:.  ..:.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .
XP_011 FRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLR
          430       440       450       460       470       480    

             540       550       560
pF1KE1 VFFKIEEKEIEHALKDKALIGNILATGLP
       : ... . .. .::::.            
XP_011 VRLNVSQDDVLYALKDE            
          490       500             

>>XP_016856878 (OMIM: 224690,601902) PREDICTED: origin r  (615 aa)
 initn: 404 init1: 167 opt: 516  Z-score: 519.8  bits: 106.2 E(85289): 3.2e-22
Smith-Waterman score: 603; 28.1% identity (62.3% similar) in 467 aa overlap (99-548:176-615)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
XP_016 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
         150       160       170       180       190       200     

      130       140              150        160        170         
pF1KE1 EITTNSEQRCPLKKESAC----VR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREM
       .  :.  ..    .   :    .:   :  :: ..  ..:.: :. .:::. :: ::.:.
XP_016 HTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEF
         210       220       230       240       250       260     

     180       190       200       210       220            230    
pF1KE1 DVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKK-----ELKGFKTIMLNCM
       . : ::.. ..  . .: .:.::.::::::: . .... :..     ..  :. : .: :
XP_016 QDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGM
         270       280       290       300       310       320     

          240       250       260       270         280       290  
pF1KE1 SLRTAQAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPM--IVLVLDEMDQLDSK
       .:   . :.  : :..  ....   . ..   : :.. .. .:.   ::..::.: : ..
XP_016 KLTEPHQVYVQILQKLTGQKATANHAAEL---LAKQFCTRGSPQETTVLLVDELDLLWTH
         330       340       350          360       370       380  

            300       310       320        330       340       350 
pF1KE1 GQDVLYTLFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQI
        ::..:.::.::  ....::...::::.:: .::.  :...:       . : ::: .:.
XP_016 KQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQL
            390       400       410       420         430       440

             360       370       380       390       400       410 
pF1KE1 VTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTIL
         ::..::...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::   
XP_016 QQILRSRLKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ---
              450          460       470       480          490    

             420       430       440       450       460       470 
pF1KE1 KPLSECKSPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLL
             ..:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  
XP_016 ------QKPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAE
                         500       510       520       530         

             480       490       500       510       520       530 
pF1KE1 IRQLKIKEVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTK
       .:.  ..:.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .
XP_016 FRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLR
      540       550       560       570       580       590        

             540       550       560
pF1KE1 VFFKIEEKEIEHALKDKALIGNILATGLP
       : ... . .. .::::.            
XP_016 VRLNVSQDDVLYALKDE            
      600       610                 

>>NP_004144 (OMIM: 224690,601902) origin recognition com  (861 aa)
 initn: 353 init1: 167 opt: 516  Z-score: 517.6  bits: 106.2 E(85289): 4.3e-22
Smith-Waterman score: 603; 28.1% identity (62.3% similar) in 467 aa overlap (99-548:422-861)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
NP_004 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
             400       410       420       430       440       450 

      130       140              150        160        170         
pF1KE1 EITTNSEQRCPLKKESAC----VR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREM
       .  :.  ..    .   :    .:   :  :: ..  ..:.: :. .:::. :: ::.:.
NP_004 HTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEF
             460       470       480       490       500       510 

     180       190       200       210       220            230    
pF1KE1 DVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKK-----ELKGFKTIMLNCM
       . : ::.. ..  . .: .:.::.::::::: . .... :..     ..  :. : .: :
NP_004 QDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGM
             520       530       540       550       560       570 

          240       250       260       270         280       290  
pF1KE1 SLRTAQAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPM--IVLVLDEMDQLDSK
       .:   . :.  : :..  ....   . ..   : :.. .. .:.   ::..::.: : ..
NP_004 KLTEPHQVYVQILQKLTGQKATANHAAEL---LAKQFCTRGSPQETTVLLVDELDLLWTH
             580       590       600          610       620        

            300       310       320        330       340       350 
pF1KE1 GQDVLYTLFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQI
        ::..:.::.::  ....::...::::.:: .::.  :...:       . : ::: .:.
NP_004 KQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQL
      630       640       650       660       670         680      

             360       370       380       390       400       410 
pF1KE1 VTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTIL
         ::..::...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::   
NP_004 QQILRSRLKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ---
        690          700       710       720       730             

             420       430       440       450       460       470 
pF1KE1 KPLSECKSPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLL
             ..:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  
NP_004 ------QKPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAE
             740             750       760       770        780    

             480       490       500       510       520       530 
pF1KE1 IRQLKIKEVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTK
       .:.  ..:.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .
NP_004 FRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLR
          790       800       810       820       830       840    

             540       550       560
pF1KE1 VFFKIEEKEIEHALKDKALIGNILATGLP
       : ... . .. .::::.            
NP_004 VRLNVSQDDVLYALKDE            
          850       860             

>>NP_001177747 (OMIM: 224690,601902) origin recognition   (861 aa)
 initn: 353 init1: 167 opt: 516  Z-score: 517.6  bits: 106.2 E(85289): 4.3e-22
Smith-Waterman score: 603; 28.1% identity (62.3% similar) in 467 aa overlap (99-548:422-861)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
NP_001 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
             400       410       420       430       440       450 

      130       140              150        160        170         
pF1KE1 EITTNSEQRCPLKKESAC----VR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREM
       .  :.  ..    .   :    .:   :  :: ..  ..:.: :. .:::. :: ::.:.
NP_001 HTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEF
             460       470       480       490       500       510 

     180       190       200       210       220            230    
pF1KE1 DVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKK-----ELKGFKTIMLNCM
       . : ::.. ..  . .: .:.::.::::::: . .... :..     ..  :. : .: :
NP_001 QDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIRCLQQAAQANDVPPFQYIEVNGM
             520       530       540       550       560       570 

          240       250       260       270         280       290  
pF1KE1 SLRTAQAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPM--IVLVLDEMDQLDSK
       .:   . :.  : :..  ....   . ..   : :.. .. .:.   ::..::.: : ..
NP_001 KLTEPHQVYVQILQKLTGQKATANHAAEL---LAKQFCTRGSPQETTVLLVDELDLLWTH
             580       590       600          610       620        

            300       310       320        330       340       350 
pF1KE1 GQDVLYTLFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQI
        ::..:.::.::  ....::...::::.:: .::.  :...:       . : ::: .:.
NP_001 KQDIMYNLFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQL
      630       640       650       660       670         680      

             360       370       380       390       400       410 
pF1KE1 VTILQDRLNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTIL
         ::..::...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::   
NP_001 QQILRSRLKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ---
        690          700       710       720       730             

             420       430       440       450       460       470 
pF1KE1 KPLSECKSPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLL
             ..:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  
NP_001 ------QKPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAE
             740             750       760       770        780    

             480       490       500       510       520       530 
pF1KE1 IRQLKIKEVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTK
       .:.  ..:.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .
NP_001 FRRSGLEEATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLR
          790       800       810       820       830       840    

             540       550       560
pF1KE1 VFFKIEEKEIEHALKDKALIGNILATGLP
       : ... . .. .::::.            
NP_001 VRLNVSQDDVLYALKDE            
          850       860             

>>XP_016856877 (OMIM: 224690,601902) PREDICTED: origin r  (825 aa)
 initn: 426 init1: 159 opt: 206  Z-score: 207.7  bits: 48.8 E(85289): 7.9e-05
Smith-Waterman score: 509; 28.0% identity (59.3% similar) in 460 aa overlap (99-548:422-825)

       70        80        90       100       110       120        
pF1KE1 HLPPCSPPKQGKKENGPPHSHTLKGRRLVFDNQLTIKSPSKRELAKVHQNKILSSVRKSQ
                                     :.. .   :  :.  .. . .. ::...: 
XP_016 RQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEASTPPLPRRAPRTVSRNLRSSLKSSL
             400       410       420       430       440       450 

      130       140              150        160        170         
pF1KE1 EITTNSEQRCPLKKESAC----VR---LFKQE-GTCYQQAKLVLN-TAVPDRLPAREREM
       .  :.  ..    .   :    .:   :  :: ..  ..:.: :. .:::. :: ::.:.
XP_016 HTLTKVPKKSLKPRTPRCAAPQIRSRSLAAQEPASVLEEARLRLHVSAVPESLPCREQEF
             460       470       480       490       500       510 

     180       190       200       210       220       230         
pF1KE1 DVIRNFLREHICGKKAGSLYLSGAPGTGKTACLSRILQDLKKELKGFKTIMLNCMSLRTA
       . : ::.. ..  . .: .:.::.::::::: . ....               :.. ..:
XP_016 QDIYNFVESKLLDHTGGCMYISGVPGTGKTATVHEVIR---------------CLQ-QAA
             520       530       540                      550      

     240       250       260       270       280       290         
pF1KE1 QAVFPAIAQEICQEEVSRPAGKDMMRKLEKHMTAEKGPMIVLVLDEMDQLDSKGQDVLYT
       ::      : :   ::.   :   :.  : :.      . : .: ..: : .. ::..:.
XP_016 QANDVPPFQYI---EVN---G---MKLTEPHQ------VYVQIL-QLDLLWTHKQDIMYN
         560             570                580        590         

     300       310       320        330       340       350        
pF1KE1 LFEWPWLSNSHLVLIGIANTLDLTDRIL-PRLQAREKCKPQLLNFPPYTRNQIVTILQDR
       ::.::  ....::...::::.:: .::.  :...:       . : ::: .:.  ::..:
XP_016 LFDWPTHKEARLVVLAIANTMDLPERIMMNRVSSRLGLTR--MCFQPYTYSQLQQILRSR
     600       610       620       630         640       650       

      360       370       380       390       400       410        
pF1KE1 LNQVSRDQVLDNAAVQFCARKVSAVSGDVRKALDVCRRAIEIVESDVKSQTILKPLSECK
       :...   ..... :.:. ::::.:.:::.:. ::.:::: :: :    ::         .
XP_016 LKHL---KAFEDDAIQLVARKVAALSGDARRCLDICRRATEICEF---SQ---------Q
       660          670       680       690          700           

      420       430       440       450       460       470        
pF1KE1 SPSEPLIPKRVGLIHISQVISEIDGNRMTLSQEGAQDSFPLQQKILVCSLMLLIRQLKIK
       .:. :      ::. :.. .  .:    .    . ..:  :.:..:  ...  .:.  ..
XP_016 KPDSP------GLVTIAHSMEAVDEMFSSSYITAIKNSSVLEQSFLR-AILAEFRRSGLE
                  710       720       730       740        750     

      480       490       500       510       520       530        
pF1KE1 EVTLGKLYEAYSKVCRKQQVAAVDQSECLSLSGLLEARGILGLKRNKETRLTKVFFKIEE
       :.:. ..:  .  .:: . .    .:: ... . : .  .: .. ...  : .: ... .
XP_016 EATFQQIYSQHVALCRMEGLPYPTMSETMAVCSHLGSCRLLLVEPSRNDLLLRVRLNVSQ
         760       770       780       790       800       810     

      540       550       560
pF1KE1 KEIEHALKDKALIGNILATGLP
        .. .::::.            
XP_016 DDVLYALKDE            
         820                 




560 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 22:39:50 2016 done: Sun Nov  6 22:39:51 2016
 Total Scan time: 11.140 Total Display time:  0.100

Function used was FASTA [36.3.4 Apr, 2011]
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