FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1317, 738 aa 1>>>pF1KE1317 738 - 738 aa - 738 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7322+/-0.00142; mu= 13.3458+/- 0.086 mean_var=115.0637+/-23.225, 0's: 0 Z-trim(101.3): 89 B-trim: 5 in 2/49 Lambda= 0.119565 statistics sampled from 6373 (6452) to 6373 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.538), E-opt: 0.2 (0.198), width: 16 Scan time: 3.560 The best scores are: opt bits E(32554) CCDS74132.1 PECAM1 gene_id:5175|Hs108|chr17 ( 738) 4772 835.4 0 >>CCDS74132.1 PECAM1 gene_id:5175|Hs108|chr17 (738 aa) initn: 4772 init1: 4772 opt: 4772 Z-score: 4457.4 bits: 835.4 E(32554): 0 Smith-Waterman score: 4772; 99.7% identity (99.9% similar) in 738 aa overlap (1-738:1-738) 10 20 30 40 50 60 pF1KE1 MQPRWAQGATMWLGVLLTLLLCSSLEGQENSFTINSVDMKSLPDWTVQNGKNLTLQCFAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 MQPRWAQGATMWLGVLLTLLLCSSLEGQENSFTINSVDMKSLPDWTVQNGKNLTLQCFAD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VSTTSHVKPQHQMLFYKDDVLFYNISSMKSTESYFIPEVRIYDSGTYKCTVIVNNKEKTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VSTTSHVKPQHQMLFYKDDVLFYNISSMKSTESYFIPEVRIYDSGTYKCTVIVNNKEKTT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 AEYQVLVEGVPSPRVTLDKKEAIQGGIVRVNCSVPEEKAPIHFTIEKLELNEKMVKLKRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 AEYQVLVEGVPSPRVTLDKKEAIQGGIVRVNCSVPEEKAPIHFTIEKLELNEKMVKLKRE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KNSRDQNFVILEFPVEEQDRVLSFRCQARIISGIHMQTSESTKSELVTVTESFSTPKFHI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KNSRDQNFVILEFPVEEQDRVLSFRCQARIISGIHMQTSESTKSELVTVTESFSTPKFHI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SPTGMIMEGAQLHIKCTIQVTHLAQEFPEIIIQKDKAIVAHNRHGNKAVYSVMAMVEHSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SPTGMIMEGAQLHIKCTIQVTHLAQEFPEIIIQKDKAIVAHNRHGNKAVYSVMAMVEHSG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 NYTCKVESSRISKVSSIVVNITELFSKPELESSFTHLDQGERLNLSCSIPGAPPANFTIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 NYTCKVESSRISKVSSIVVNITELFSKPELESSFTHLDQGERLNLSCSIPGAPPANFTIQ 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 KEDTIVSQTQDFTKIASKSDSGTYICTAGIDKVVKKSNTVQIVVCEMLSQPRISYDAQFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KEDTIVSQTQDFTKIASKSDSGTYICTAGIDKVVKKSNTVQIVVCEMLSQPRISYDAQFE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 VIKGQTIEVRCESISGTLPISYQLLKTSKVLENSTKNSNDPAVFKDNPTEDVEYQCVADN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 VIKGQTIEVRCESISGTLPISYQLLKTSKVLENSTKNSNDPAVFKDNPTEDVEYQCVADN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 CHSHAKMLSEVLRVKVIAPVDEVQISILSSKVVESGEDIVLQCAVNEGSGPITYKFYREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 CHSHAKMLSEVLRVKVIAPVDEVQISILSSKVVESGEDIVLQCAVNEGSGPITYKFYREK 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 EGKPFYQMTSNATQAFWTKQKANKEQEGEYYCTAFNRANHASSVPRSKILTVRVILAPWK ::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::: CCDS74 EGKPFYQMTSNATQAFWTKQKASKEQEGEYYCTAFNRANHASSVPRSKILTVRVILAPWK 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 KGLIAVVIIGVIIALLIIAAKCYFLRKAKAKQMPVEMSRPAVPLLNSNNEKMSDPNMEAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KGLIAVVIIGVIIALLIIAAKCYFLRKAKAKQMPVEMSRPAVPLLNSNNEKMSDPNMEAN 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 SHYGHNDDVGNHAMKPINDNKEPLNSDVQYTEVQVSSAESHKDLGKKDTETVYSEVRKAV ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 SHYGHNDDVRNHAMKPINDNKEPLNSDVQYTEVQVSSAESHKDLGKKDTETVYSEVRKAV 670 680 690 700 710 720 730 pF1KE1 PDAVESRYSRTEGSLDGT :::::::::::::::::: CCDS74 PDAVESRYSRTEGSLDGT 730 738 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 22:41:56 2016 done: Sun Nov 6 22:41:56 2016 Total Scan time: 3.560 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]