(Linear) (Six-base) MAPSORT of: KIEE1505.seq Check: 6503 from: 1 to: 1488 KIEE1505.orf With 182 enzymes: SgfI * July 15, 2010 18:40 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 597 732 1488 Size: 597 135 756 Fragments arranged by size: 756 597 135 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 523 1042 1488 Size: 523 519 446 Fragments arranged by size: 523 519 446 AflIII A'CryG_T Cuts at: 0 833 1488 Size: 833 655 AleI CACnn'nnGTG Cuts at: 0 541 1488 Size: 541 947 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 559 932 1237 1488 Size: 559 373 305 251 Fragments arranged by size: 559 373 305 251 AlwNI CAG_nnn'CTG Cuts at: 0 153 1020 1068 1290 1488 Size: 153 867 48 222 198 Fragments arranged by size: 867 222 198 153 48 ApaLI G'TGCA_C Cuts at: 0 668 1488 Size: 668 820 AvaI C'yCGr_G Cuts at: 0 6 1477 1488 Size: 6 1471 11 Fragments arranged by size: 1471 11 6 BanI G'GyrC_C Cuts at: 0 1053 1228 1353 1384 1488 Size: 1053 175 125 31 104 Fragments arranged by size: 1053 175 125 104 31 BbeI G_GCGC'C Cuts at: 0 1232 1488 Size: 1232 256 BbsI GAAGACnn'nnnn_ Cuts at: 0 453 1179 1488 Size: 453 726 309 Fragments arranged by size: 726 453 309 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 0 616 650 1488 Size: 616 34 838 Fragments arranged by size: 838 616 34 BglI GCCn_nnn'nGGC Cuts at: 0 586 1488 Size: 586 902 BlpI GC'TnA_GC Cuts at: 0 1450 1488 Size: 1450 38 Bme1580I G_kGCm'C Cuts at: 0 672 1048 1488 Size: 672 376 440 Fragments arranged by size: 672 440 376 BmgBI CAC'GTC Cuts at: 0 405 651 1488 Size: 405 246 837 Fragments arranged by size: 837 405 246 BmrI ACTGGGnnnn_n' Cuts at: 0 555 682 1213 1488 Size: 555 127 531 275 Fragments arranged by size: 555 531 275 127 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 936 1488 Size: 936 552 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 163 1351 1462 1488 Size: 163 1188 111 26 Fragments arranged by size: 1188 163 111 26 Bpu10I CC'TnA_GC Cuts at: 0 1283 1488 Size: 1283 205 BsaI GGTCTCn'nnnn_ Cuts at: 0 1330 1488 Size: 1330 158 BsaHI Gr'CG_yC Cuts at: 0 1229 1488 Size: 1229 259 BsaWI w'CCGG_w Cuts at: 0 20 1397 1488 Size: 20 1377 91 Fragments arranged by size: 1377 91 20 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 919 949 1488 Size: 919 30 539 Fragments arranged by size: 919 539 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 643 1348 1488 Size: 643 705 140 Fragments arranged by size: 705 643 140 BseYI C'CCAG_C Cuts at: 0 594 1290 1488 Size: 594 696 198 Fragments arranged by size: 696 594 198 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 145 625 766 1027 1243 1273 1488 Size: 145 480 141 261 216 30 215 Fragments arranged by size: 480 261 216 215 145 141 30 BsiHKAI G_wGCw'C Cuts at: 0 13 548 672 878 1488 Size: 13 535 124 206 610 Fragments arranged by size: 610 535 206 124 13 Bsp1286I G_dGCh'C Cuts at: 0 13 548 672 878 1048 1488 Size: 13 535 124 206 170 440 Fragments arranged by size: 535 440 206 170 124 13 BspEI T'CCGG_A Cuts at: 0 1397 1488 Size: 1397 91 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 597 732 1173 1445 1488 Size: 597 135 441 272 43 Fragments arranged by size: 597 441 272 135 43 BsrBI CCG'CTC Cuts at: 0 795 1364 1488 Size: 795 569 124 Fragments arranged by size: 795 569 124 BsrFI r'CCGG_y Cuts at: 0 517 1050 1339 1488 Size: 517 533 289 149 Fragments arranged by size: 533 517 289 149 BssHII G'CGCG_C Cuts at: 0 1278 1488 Size: 1278 210 BssSI C'ACGA_G Cuts at: 0 701 1488 Size: 701 787 BstAPI GCAn_nnn'nTGC Cuts at: 0 153 1017 1143 1211 1488 Size: 153 864 126 68 277 Fragments arranged by size: 864 277 153 126 68 BstBI TT'CG_AA Cuts at: 0 788 1488 Size: 788 700 BstEII G'GTnAC_C Cuts at: 0 16 1488 Size: 16 1472 BtgI C'CryG_G Cuts at: 0 842 966 1264 1488 Size: 842 124 298 224 Fragments arranged by size: 842 298 224 124 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 497 1488 Size: 497 991 BtsI GCAGTG_nn' Cuts at: 0 113 608 690 1010 1148 1488 Size: 113 495 82 320 138 340 Fragments arranged by size: 495 340 320 138 113 82 DrdI GACnn_nn'nnGTC Cuts at: 0 1081 1488 Size: 1081 407 EaeI y'GGCC_r Cuts at: 0 515 578 653 1160 1488 Size: 515 63 75 507 328 Fragments arranged by size: 515 507 328 75 63 EarI CTCTTCn'nnn_ Cuts at: 0 785 1488 Size: 785 703 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 337 826 1488 Size: 337 489 662 Fragments arranged by size: 662 489 337 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 163 523 1042 1351 1462 1488 Size: 163 360 519 309 111 26 Fragments arranged by size: 519 360 309 163 111 26 EcoNI CCTnn'n_nnAGG Cuts at: 0 247 625 1330 1488 Size: 247 378 705 158 Fragments arranged by size: 705 378 247 158 EcoO109I rG'GnC_Cy Cuts at: 0 362 1065 1488 Size: 362 703 423 Fragments arranged by size: 703 423 362 FspI TGC'GCA Cuts at: 0 1118 1488 Size: 1118 370 HaeII r_GCGC'y Cuts at: 0 646 1232 1488 Size: 646 586 256 Fragments arranged by size: 646 586 256 HincII GTy'rAC Cuts at: 0 270 1488 Size: 270 1218 HpaI GTT'AAC Cuts at: 0 270 1488 Size: 270 1218 KasI G'GCGC_C Cuts at: 0 1228 1488 Size: 1228 260 MslI CAynn'nnrTG Cuts at: 0 541 883 1348 1488 Size: 541 342 465 140 Fragments arranged by size: 541 465 342 140 MspA1I CmG'CkG Cuts at: 0 390 844 968 1211 1257 1266 1377 1488 Size: 390 454 124 243 46 9 111 111 Fragments arranged by size: 454 390 243 124 111 111 46 9 NaeI GCC'GGC Cuts at: 0 519 1488 Size: 519 969 NarI GG'CG_CC Cuts at: 0 1229 1488 Size: 1229 259 NgoMIV G'CCGG_C Cuts at: 0 517 1488 Size: 517 971 PflMI CCAn_nnn'nTGG Cuts at: 0 255 357 1488 Size: 255 102 1131 Fragments arranged by size: 1131 255 102 PfoI T'CCnGG_A Cuts at: 0 395 1328 1488 Size: 395 933 160 Fragments arranged by size: 933 395 160 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 946 978 1488 Size: 946 32 510 Fragments arranged by size: 946 510 32 PspXI vC'TCGA_Gb Cuts at: 0 6 1477 1488 Size: 6 1471 11 Fragments arranged by size: 1471 11 6 PstI C_TGCA'G Cuts at: 0 1005 1488 Size: 1005 483 PvuII CAG'CTG Cuts at: 0 390 1211 1257 1488 Size: 390 821 46 231 Fragments arranged by size: 821 390 231 46 SacII CC_GC'GG Cuts at: 0 845 969 1267 1488 Size: 845 124 298 221 Fragments arranged by size: 845 298 221 124 SapI GCTCTTCn'nnn_ Cuts at: 0 785 1488 Size: 785 703 ScaI AGT'ACT Cuts at: 0 1483 1488 Size: 1483 5 SexAI A'CCwGG_T Cuts at: 0 1076 1488 Size: 1076 412 SfcI C'TryA_G Cuts at: 0 366 1001 1488 Size: 366 635 487 Fragments arranged by size: 635 487 366 SfoI GGC'GCC Cuts at: 0 1230 1488 Size: 1230 258 SgrAI Cr'CCGG_yG Cuts at: 0 1050 1488 Size: 1050 438 SmlI C'TyrA_G Cuts at: 0 6 1477 1488 Size: 6 1471 11 Fragments arranged by size: 1471 11 6 StyI C'CwwG_G Cuts at: 0 134 938 1163 1418 1488 Size: 134 804 225 255 70 Fragments arranged by size: 804 255 225 134 70 TatI w'GTAC_w Cuts at: 0 1235 1481 1488 Size: 1235 246 7 Fragments arranged by size: 1235 246 7 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 919 951 1488 Size: 919 32 537 Fragments arranged by size: 919 537 32 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 945 1488 Size: 945 543 XhoI C'TCGA_G Cuts at: 0 6 1477 1488 Size: 6 1471 11 Fragments arranged by size: 1471 11 6 XmnI GAAnn'nnTTC Cuts at: 0 175 1488 Size: 175 1313 Enzymes that do cut: AarI AcuI AflIII AleI AlfI AlwNI ApaLI AvaI BanI BbeI BbsI BcgI BglI BlpI Bme1580I BmgBI BmrI BplI BpmI Bpu10I BsaI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI Bsp1286I BspEI BspMI BsrBI BsrFI BssHII BssSI BstAPI BstBI BstEII BtgI BtgZI BtsI DrdI EaeI EarI EciI Eco57MI EcoNI EcoO109I FspI HaeII HincII HpaI KasI MslI MspA1I NaeI NarI NgoMIV PflMI PfoI PpiI PspXI PstI PvuII SacII SapI ScaI SexAI SfcI SfoI SgrAI SmlI StyI TatI TstI XcmI XhoI XmnI Enzymes that do not cut: AatII AccI Acc65I AclI AfeI AflII AgeI AhdI AloI ApaI ApoI AscI AseI AsiSI AvrII BaeI BamHI BanII BbvCI BciVI BclI BfrBI BglII BmtI BpuEI BsaAI BsaBI BsiEI BsiWI BsmI BsmBI BspHI BsrDI BsrGI BstXI BstYI BstZ17I Bsu36I ClaI CspCI DraI DraIII EagI EcoICRI EcoRI EcoRV FalI FseI FspAI Hin4I HindIII KpnI MfeI MluI MmeI MscI NcoI NdeI NheI NotI NruI NsiI NspI PacI PasI PciI PmeI PmlI PpuMI PshAI PsiI PspOMI PsrI PvuI RsrII SacI SalI SanDI SbfI SfiI SgfI SmaI SnaBI SpeI SphI SrfI SspI StuI SwaI TaqII Tth111I XbaI XmaI ZraI