Result of FASTA (omim) for pFN21AE3618
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE3618, 298 aa
  1>>>pF1KE3618 298 - 298 aa - 298 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1469+/-0.00029; mu= 14.1464+/- 0.018
 mean_var=150.4984+/-31.622, 0's: 0 Z-trim(122.4): 116  B-trim: 1859 in 1/54
 Lambda= 0.104546
 statistics sampled from 40425 (40584) to 40425 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.81), E-opt: 0.2 (0.476), width:  16
 Scan time:  8.640

The best scores are:                                      opt bits E(85289)
NP_647478 (OMIM: 605737) baculoviral IAP repeat-co ( 298) 2163 337.2 2.4e-92
NP_071444 (OMIM: 605737) baculoviral IAP repeat-co ( 280) 1589 250.6 2.7e-66
NP_892007 (OMIM: 601721) baculoviral IAP repeat-co ( 604)  389 70.0 1.3e-11
XP_016873132 (OMIM: 601721) PREDICTED: baculoviral ( 604)  389 70.0 1.3e-11
NP_001156 (OMIM: 601721) baculoviral IAP repeat-co ( 604)  389 70.0 1.3e-11
NP_001243095 (OMIM: 601712) baculoviral IAP repeat ( 569)  384 69.2 2.2e-11
NP_001157 (OMIM: 601712) baculoviral IAP repeat-co ( 618)  384 69.2 2.3e-11
NP_001243092 (OMIM: 601712) baculoviral IAP repeat ( 618)  384 69.2 2.3e-11
XP_006724817 (OMIM: 300079,300635,308240) PREDICTE ( 497)  330 61.0 5.6e-09
NP_001191330 (OMIM: 300079,300635,308240) E3 ubiqu ( 497)  330 61.0 5.6e-09
NP_001158 (OMIM: 300079,300635,308240) E3 ubiquiti ( 497)  330 61.0 5.6e-09
XP_011529631 (OMIM: 300079,300635,308240) PREDICTE ( 497)  330 61.0 5.6e-09
NP_004527 (OMIM: 600355) baculoviral IAP repeat-co (1403)  303 57.4 1.8e-07
NP_075043 (OMIM: 600355) baculoviral IAP repeat-co (1241)  281 54.0 1.7e-06
XP_016855855 (OMIM: 611141) PREDICTED: E3 ubiquiti ( 911)  217 44.2  0.0011
XP_016855854 (OMIM: 611141) PREDICTED: E3 ubiquiti ( 932)  217 44.2  0.0011
NP_001164159 (OMIM: 611141) E3 ubiquitin-protein l (1005)  217 44.3  0.0012
XP_016855853 (OMIM: 611141) PREDICTED: E3 ubiquiti (1029)  217 44.3  0.0012
XP_016855852 (OMIM: 611141) PREDICTED: E3 ubiquiti (1033)  217 44.3  0.0012
XP_006710435 (OMIM: 611141) PREDICTED: E3 ubiquiti (1034)  217 44.3  0.0012
XP_016855851 (OMIM: 611141) PREDICTED: E3 ubiquiti (1047)  217 44.3  0.0012
NP_001164158 (OMIM: 611141) E3 ubiquitin-protein l (1056)  217 44.3  0.0012
NP_001164157 (OMIM: 611141) E3 ubiquitin-protein l (1066)  217 44.3  0.0012
NP_543151 (OMIM: 611141) E3 ubiquitin-protein liga (1070)  217 44.3  0.0012
XP_016855850 (OMIM: 611141) PREDICTED: E3 ubiquiti (1094)  217 44.3  0.0013
XP_016855849 (OMIM: 611141) PREDICTED: E3 ubiquiti (1134)  217 44.3  0.0013
XP_016855848 (OMIM: 611141) PREDICTED: E3 ubiquiti (1144)  217 44.4  0.0013
XP_016855847 (OMIM: 611141) PREDICTED: E3 ubiquiti (1148)  217 44.4  0.0013
XP_011539044 (OMIM: 611141) PREDICTED: E3 ubiquiti (1183)  217 44.4  0.0013
XP_011539043 (OMIM: 611141) PREDICTED: E3 ubiquiti (1184)  217 44.4  0.0013
XP_011539039 (OMIM: 611141) PREDICTED: E3 ubiquiti (1219)  217 44.4  0.0014
XP_016855846 (OMIM: 611141) PREDICTED: E3 ubiquiti (1232)  217 44.4  0.0014
XP_016855845 (OMIM: 611141) PREDICTED: E3 ubiquiti (1240)  217 44.4  0.0014
XP_011539038 (OMIM: 611141) PREDICTED: E3 ubiquiti (1240)  217 44.4  0.0014
XP_016855844 (OMIM: 611141) PREDICTED: E3 ubiquiti (1241)  217 44.4  0.0014
XP_016855843 (OMIM: 611141) PREDICTED: E3 ubiquiti (1264)  217 44.4  0.0014
XP_011539033 (OMIM: 611141) PREDICTED: E3 ubiquiti (1273)  217 44.4  0.0014
XP_016855842 (OMIM: 611141) PREDICTED: E3 ubiquiti (1276)  217 44.4  0.0014
XP_016855841 (OMIM: 611141) PREDICTED: E3 ubiquiti (1283)  217 44.4  0.0014
XP_016855840 (OMIM: 611141) PREDICTED: E3 ubiquiti (1291)  217 44.4  0.0014
XP_016855839 (OMIM: 611141) PREDICTED: E3 ubiquiti (1293)  217 44.4  0.0014
XP_016855838 (OMIM: 611141) PREDICTED: E3 ubiquiti (1297)  217 44.4  0.0014
XP_005249090 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 264)  195 40.3   0.005
XP_005249089 (OMIM: 610082) PREDICTED: E3 ubiquiti ( 390)  195 40.5  0.0065
NP_037394 (OMIM: 610082) E3 ubiquitin-protein liga ( 445)  195 40.5   0.007
NP_001159 (OMIM: 603352) baculoviral IAP repeat-co ( 142)  187 38.7  0.0078


>>NP_647478 (OMIM: 605737) baculoviral IAP repeat-contai  (298 aa)
 initn: 2163 init1: 2163 opt: 2163  Z-score: 1778.9  bits: 337.2 E(85289): 2.4e-92
Smith-Waterman score: 2163; 99.7% identity (100.0% similar) in 298 aa overlap (1-298:1-298)

               10        20        30        40        50        60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
       ::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::
NP_647 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAEAQRAWWVLEPPGARDVE
              190       200       210       220       230       240

              250       260       270       280       290        
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_647 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
              250       260       270       280       290        

>>NP_071444 (OMIM: 605737) baculoviral IAP repeat-contai  (280 aa)
 initn: 1587 init1: 1587 opt: 1589  Z-score: 1311.3  bits: 250.6 E(85289): 2.7e-66
Smith-Waterman score: 1984; 94.0% identity (94.0% similar) in 298 aa overlap (1-298:1-280)

               10        20        30        40        50        60
pF1KE3 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 MGPKDSAKCLHRGPQPSHWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE3 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 PLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE3 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 KVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE3 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVE
       :::::::::::::::::::::::::::::::::::::                  :::::
NP_071 EEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPG------------------ARDVE
              190       200       210                         220  

              250       260       270       280       290        
pF1KE3 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_071 AQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVRSRVRTFLS
            230       240       250       260       270       280

>>NP_892007 (OMIM: 601721) baculoviral IAP repeat-contai  (604 aa)
 initn: 617 init1: 380 opt: 389  Z-score: 329.3  bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)

        20        30        40        50        60             70  
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
                                     :.  :. .  .::     :. :.. .. . 
NP_892 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
          190       200       210       220       230       240    

             80        90       100       110       120       130  
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
        :.:      .: ..  :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
NP_892 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
          250           260       270       280       290       300

            140       150       160       170       180       190  
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
        :. :::::..:::::: :..:.: ::..:...:: .. .::                  
NP_892 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
              310       320       330       340       350       360

            200       210       220       230       240       250  
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
                                                                   
NP_892 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
              370       380       390       400       410       420

>--
 initn: 215 init1: 205 opt: 327  Z-score: 278.7  bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     :: ::::::::::::::.:. :::::.:::
NP_892 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
           520       530       540       550       560       570   

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : .:::.:. :::::. ... ::::::
NP_892 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
           580       590       600    

>--
 initn: 284 init1: 200 opt: 230  Z-score: 199.7  bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)

            60        70        80        90       100       110   
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
                                     .. :  :....  .:  . :  . :: :::
NP_892      MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
                    10        20        30        40        50     

           120       130       140       150       160       170   
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
       ..:: .:::.:: :   :..:::::.:  .: : .:::.:.   .. . :.... : .  
NP_892 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
          60        70        80        90          100       110  

           180       190          200       210       220       230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
       .    :    ...  . :..  :::       .:   :.:.. :.               
NP_892 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
                120       130       140       150       160        

              240       250       260       270       280       290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
                                                                   
NP_892 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
      170       180       190       200       210       220        

>>XP_016873132 (OMIM: 601721) PREDICTED: baculoviral IAP  (604 aa)
 initn: 617 init1: 380 opt: 389  Z-score: 329.3  bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)

        20        30        40        50        60             70  
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
                                     :.  :. .  .::     :. :.. .. . 
XP_016 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
          190       200       210       220       230       240    

             80        90       100       110       120       130  
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
        :.:      .: ..  :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
XP_016 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
          250           260       270       280       290       300

            140       150       160       170       180       190  
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
        :. :::::..:::::: :..:.: ::..:...:: .. .::                  
XP_016 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
              310       320       330       340       350       360

            200       210       220       230       240       250  
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
                                                                   
XP_016 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
              370       380       390       400       410       420

>--
 initn: 215 init1: 205 opt: 327  Z-score: 278.7  bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     :: ::::::::::::::.:. :::::.:::
XP_016 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
           520       530       540       550       560       570   

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : .:::.:. :::::. ... ::::::
XP_016 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
           580       590       600    

>--
 initn: 284 init1: 200 opt: 230  Z-score: 199.7  bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)

            60        70        80        90       100       110   
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
                                     .. :  :....  .:  . :  . :: :::
XP_016      MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
                    10        20        30        40        50     

           120       130       140       150       160       170   
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
       ..:: .:::.:: :   :..:::::.:  .: : .:::.:.   .. . :.... : .  
XP_016 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
          60        70        80        90          100       110  

           180       190          200       210       220       230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
       .    :    ...  . :..  :::       .:   :.:.. :.               
XP_016 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
                120       130       140       150       160        

              240       250       260       270       280       290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
                                                                   
XP_016 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
      170       180       190       200       210       220        

>>NP_001156 (OMIM: 601721) baculoviral IAP repeat-contai  (604 aa)
 initn: 617 init1: 380 opt: 389  Z-score: 329.3  bits: 70.0 E(85289): 1.3e-11
Smith-Waterman score: 389; 39.4% identity (71.2% similar) in 132 aa overlap (48-174:215-342)

        20        30        40        50        60             70  
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLR-----PLTEEEEEEGAG
                                     :.  :. .  .::     :. :.. .. . 
NP_001 SPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRHFPKCPFIENQLQDTSR
          190       200       210       220       230       240    

             80        90       100       110       120       130  
pF1KE3 ATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQ
        :.:      .: ..  :. .:..:: .. : :: ::.:::...:..: :.:: : :::.
NP_001 YTVSNL----SMQTHAARFKTFFNWPSSVLVNPEQLASAGFYYVGNSDDVKCFCCDGGLR
          250           260       270       280       290       300

            140       150       160       170       180       190  
pF1KE3 SWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQLLGSWDPWEEPEDAAPVAPS
        :. :::::..:::::: :..:.: ::..:...:: .. .::                  
NP_001 CWESGDDPWVQHAKWFPRCEYLIRIKGQEFIRQVQASYPHLLEQLLSTSDSPGDENAESS
              310       320       330       340       350       360

            200       210       220       230       240       250  
pF1KE3 VPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTC
                                                                   
NP_001 IIHFEPGEDHSEDAIMMNTPVINAAVEMGFSRSLVKQTVQRKILATGENYRLVNDLVLDL
              370       380       390       400       410       420

>--
 initn: 215 init1: 205 opt: 327  Z-score: 278.7  bits: 60.6 E(85289): 8.7e-09
Smith-Waterman score: 327; 72.1% identity (88.5% similar) in 61 aa overlap (239-298:544-604)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     :: ::::::::::::::.:. :::::.:::
NP_001 LQEAEAVLYEHLFVQQDIKYIPTEDVSDLPVEEQLRRLQEERTCKVCMDKEVSIVFIPCG
           520       530       540       550       560       570   

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : .:::.:. :::::. ... ::::::
NP_001 HLVVCKDCAPSLRKCPICRSTIKGTVRTFLS
           580       590       600    

>--
 initn: 284 init1: 200 opt: 230  Z-score: 199.7  bits: 46.0 E(85289): 0.00022
Smith-Waterman score: 230; 30.4% identity (60.0% similar) in 135 aa overlap (84-215:26-153)

            60        70        80        90       100       110   
pF1KE3 QILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGF
                                     .. :  :....  .:  . :  . :: :::
NP_001      MNIVENSIFLSNLMKSANTFELKYDLSCELYRMSTYSTFPAGVPVSERSLARAGF
                    10        20        30        40        50     

           120       130       140       150       160       170   
pF1KE3 FHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHSQL
       ..:: .:::.:: :   :..:::::.:  .: : .:::.:.   .. . :.... : .  
NP_001 YYTGVNDKVKCFCCGLMLDNWKRGDSPTEKHKKLYPSCRFV---QSLNSVNNLEATSQPT
          60        70        80        90          100       110  

           180       190          200       210       220       230
pF1KE3 LGSWDPWEEPEDAAPVAPSVPASGY---PELPTPRREVQSESAQEPGGVSPAQAQRAWWV
       .    :    ...  . :..  :::       .:   :.:.. :.               
NP_001 F----PSSVTNSTHSLLPGTENSGYFRGSYSNSPSNPVNSRANQDFSALMRSSYHCAMNN
                120       130       140       150       160        

              240       250       260       270       280       290
pF1KE3 LEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCGHLVCAECAPGLQLCPICRAPVR
                                                                   
NP_001 ENARLLTFQTWPLTFLSPTDLAKAGFYYIGPGDRVACFACGGKLSNWEPKDNAMSEHLRH
      170       180       190       200       210       220        

>>NP_001243095 (OMIM: 601712) baculoviral IAP repeat-con  (569 aa)
 initn: 562 init1: 376 opt: 384  Z-score: 325.5  bits: 69.2 E(85289): 2.2e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:181-337)

        20        30        40        50        60        70       
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
                                     :.  :  .  . : . .    :..  ::  
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
              160       170       180       190       200       210

        80        90       100       110       120       130       
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
       . .  .: ..  :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
              220       230       240       250       260       270

       140       150       160       170           180       190   
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
       ::::.::::::: :.::.: ::..::  .:  .     :::.. :   : .   :.    
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
              280       290       300       310       320       330

           200       210       220       230       240       250   
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
       :. .  :                                                     
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
              340       350       360       370       380       390

>--
 initn: 206 init1: 200 opt: 323  Z-score: 275.8  bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:509-569)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     .: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
      480       490       500       510       520       530        

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
      540       550       560         

>>NP_001157 (OMIM: 601712) baculoviral IAP repeat-contai  (618 aa)
 initn: 562 init1: 376 opt: 384  Z-score: 325.1  bits: 69.2 E(85289): 2.3e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:230-386)

        20        30        40        50        60        70       
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
                                     :.  :  .  . : . .    :..  ::  
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
     200       210       220       230       240       250         

        80        90       100       110       120       130       
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
       . .  .: ..  :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
     260       270       280       290       300       310         

       140       150       160       170           180       190   
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
       ::::.::::::: :.::.: ::..::  .:  .     :::.. :   : .   :.    
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
     320       330       340       350       360       370         

           200       210       220       230       240       250   
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
       :. .  :                                                     
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
     380       390       400       410       420       430         

>--
 initn: 206 init1: 200 opt: 323  Z-score: 275.3  bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:558-618)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     .: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
       530       540       550       560       570       580       

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
       590       600       610        

>>NP_001243092 (OMIM: 601712) baculoviral IAP repeat-con  (618 aa)
 initn: 562 init1: 376 opt: 384  Z-score: 325.1  bits: 69.2 E(85289): 2.3e-11
Smith-Waterman score: 384; 36.9% identity (61.8% similar) in 157 aa overlap (48-200:230-386)

        20        30        40        50        60        70       
pF1KE3 HWAAGDGPTQERCGPRSLGSPVLGLDTCRAWDHVDGQILGQLRPLTEEEEEEGAGATLSR
                                     :.  :  .  . : . .    :..  ::  
NP_001 SPSELARAGFYYIGPGDRVACFACGGKLSNWEPKDDAMSEHRRHFPNCPFLENSLETLRF
     200       210       220       230       240       250         

        80        90       100       110       120       130       
pF1KE3 GPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRG
       . .  .: ..  :. .:. :: .. : :: ::.:::...:..: :.:: : :::. :. :
NP_001 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESG
     260       270       280       290       300       310         

       140       150       160       170           180       190   
pF1KE3 DDPWTEHAKWFPSCQFLLRSKGRDFVHSVQETHS----QLLGSWDPWEEPEDAAPVAPSV
       ::::.::::::: :.::.: ::..::  .:  .     :::.. :   : .   :.    
NP_001 DDPWVEHAKWFPRCEFLIRMKGQEFVDEIQGRYPHLLEQLLSTSDTTGEENADPPIIHFG
     320       330       340       350       360       370         

           200       210       220       230       240       250   
pF1KE3 PASGYPELPTPRREVQSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCK
       :. .  :                                                     
NP_001 PGESSSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILTTGENYKTVNDIVSALLNAED
     380       390       400       410       420       430         

>--
 initn: 206 init1: 200 opt: 323  Z-score: 275.3  bits: 60.0 E(85289): 1.3e-08
Smith-Waterman score: 323; 70.5% identity (88.5% similar) in 61 aa overlap (239-298:558-618)

      210       220       230       240       250       260        
pF1KE3 QSESAQEPGGVSPAQAQRAWWVLEPPGARDVEAQLRRLQEERTCKVCLDRAVSIVFVPCG
                                     .: ::::::::::::::.:. ::.::.:::
NP_001 LKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCG
       530       540       550       560       570       580       

      270        280       290        
pF1KE3 HLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::: : ::::.:. :::::. ... ::::::
NP_001 HLVVCQECAPSLRKCPICRGIIKGTVRTFLS
       590       600       610        

>>XP_006724817 (OMIM: 300079,300635,308240) PREDICTED: E  (497 aa)
 initn: 529 init1: 296 opt: 330  Z-score: 282.1  bits: 61.0 E(85289): 5.6e-09
Smith-Waterman score: 508; 35.1% identity (62.0% similar) in 245 aa overlap (79-298:257-497)

       50        60        70        80        90       100        
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
                                     :  :.:.. : :. .:  :  .  :  : :
XP_006 CFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQL
        230       240       250       260       270         280    

      110       120       130       140       150       160        
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
       : :::.  :. :::.:: : ::: .:: ..::: .::::.:.:..::..::........ 
XP_006 ARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHL
          290       300       310       320       330       340    

      170              180       190          200       210        
pF1KE3 THSQ---LLGSWD--P--WEEPEDAAPVAPSVPAS---GYPELPTPRREVQSESAQEPGG
       :::    :. . .  :   .. .:.    : :  .   :.       .... :. :  :.
XP_006 THSLEECLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDI--KKIMEEKIQISGS
          350       360       370       380         390       400  

               220       230            240       250       260    
pF1KE3 ---------VSPAQAQRAWWVLEPPGA---RDV--EAQLRRLQEERTCKVCLDRAVSIVF
                .. ..::.     :   .   ...  : ::::::::. ::.:.:: ..:::
XP_006 NYKSLEVLVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVF
            410       420       430       440       450       460  

          270        280       290        
pF1KE3 VPCGHLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::::::: : .:: ... ::.: . .  . . :.:
XP_006 VPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
            470       480       490       

>--
 initn: 422 init1: 274 opt: 276  Z-score: 238.1  bits: 52.8 E(85289): 1.6e-06
Smith-Waterman score: 276; 46.4% identity (70.2% similar) in 84 aa overlap (79-162:155-235)

       50        60        70        80        90       100        
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
                                     :  :.: ::: :: :: .::  :.. :. :
XP_006 DHFALDRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPREL
          130       140       150       160       170       180    

      110       120       130       140       150       160        
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
       :.::...::  :.:.:: : : :..:.  :  :.:: . ::.: :.:   ::..      
XP_006 ASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL---GRNLNIRSES
          190       200       210       220       230          240 

      170       180       190       200       210       220        
pF1KE3 THSQLLGSWDPWEEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAW
                                                                   
XP_006 DAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCF
             250       260       270       280       290       300 

>>NP_001191330 (OMIM: 300079,300635,308240) E3 ubiquitin  (497 aa)
 initn: 529 init1: 296 opt: 330  Z-score: 282.1  bits: 61.0 E(85289): 5.6e-09
Smith-Waterman score: 508; 35.1% identity (62.0% similar) in 245 aa overlap (79-298:257-497)

       50        60        70        80        90       100        
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
                                     :  :.:.. : :. .:  :  .  :  : :
NP_001 CFFVLGRNLNIRSESDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYS--VNKEQL
        230       240       250       260       270         280    

      110       120       130       140       150       160        
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
       : :::.  :. :::.:: : ::: .:: ..::: .::::.:.:..::..::........ 
NP_001 ARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHL
          290       300       310       320       330       340    

      170              180       190          200       210        
pF1KE3 THSQ---LLGSWD--P--WEEPEDAAPVAPSVPAS---GYPELPTPRREVQSESAQEPGG
       :::    :. . .  :   .. .:.    : :  .   :.       .... :. :  :.
NP_001 THSLEECLVRTTEKTPSLTRRIDDTIFQNPMVQEAIRMGFSFKDI--KKIMEEKIQISGS
          350       360       370       380         390       400  

               220       230            240       250       260    
pF1KE3 ---------VSPAQAQRAWWVLEPPGA---RDV--EAQLRRLQEERTCKVCLDRAVSIVF
                .. ..::.     :   .   ...  : ::::::::. ::.:.:: ..:::
NP_001 NYKSLEVLVADLVNAQKDSMQDESSQTSLQKEISTEEQLRRLQEEKLCKICMDRNIAIVF
            410       420       430       440       450       460  

          270        280       290        
pF1KE3 VPCGHLV-CAECAPGLQLCPICRAPVRSRVRTFLS
       ::::::: : .:: ... ::.: . .  . . :.:
NP_001 VPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFMS
            470       480       490       

>--
 initn: 422 init1: 274 opt: 276  Z-score: 238.1  bits: 52.8 E(85289): 1.6e-06
Smith-Waterman score: 276; 46.4% identity (70.2% similar) in 84 aa overlap (79-162:155-235)

       50        60        70        80        90       100        
pF1KE3 DHVDGQILGQLRPLTEEEEEEGAGATLSRGPAFPGMGSEELRLASFYDWPLTAEVPPELL
                                     :  :.: ::: :: :: .::  :.. :. :
NP_001 DHFALDRPSETHADYLLRTGQVVDISDTIYPRNPAMYSEEARLKSFQNWPDYAHLTPREL
          130       140       150       160       170       180    

      110       120       130       140       150       160        
pF1KE3 AAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPSCQFLLRSKGRDFVHSVQE
       :.::...::  :.:.:: : : :..:.  :  :.:: . ::.: :.:   ::..      
NP_001 ASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL---GRNLNIRSES
          190       200       210       220       230          240 

      170       180       190       200       210       220        
pF1KE3 THSQLLGSWDPWEEPEDAAPVAPSVPASGYPELPTPRREVQSESAQEPGGVSPAQAQRAW
                                                                   
NP_001 DAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCF
             250       260       270       280       290       300 




298 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 22:57:08 2016 done: Sun Nov  6 22:57:09 2016
 Total Scan time:  8.640 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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