Result of FASTA (ccds) for pFN21AE4501
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4501, 527 aa
  1>>>pF1KE4501 527 - 527 aa - 527 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8165+/-0.00107; mu= 14.9750+/- 0.063
 mean_var=65.5994+/-13.394, 0's: 0 Z-trim(103.1): 46  B-trim: 306 in 1/47
 Lambda= 0.158352
 statistics sampled from 7219 (7247) to 7219 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.588), E-opt: 0.2 (0.223), width:  16
 Scan time:  3.020

The best scores are:                                      opt bits E(32554)
CCDS14260.1 MAOA gene_id:4128|Hs108|chrX           ( 527) 3566 824.0       0
CCDS59163.1 MAOA gene_id:4128|Hs108|chrX           ( 394) 2692 624.3 7.9e-179
CCDS14261.1 MAOB gene_id:4129|Hs108|chrX           ( 520) 2648 614.3 1.1e-175
CCDS12787.1 IL4I1 gene_id:259307|Hs108|chr19       ( 567)  356 90.7 4.9e-18
CCDS12786.1 IL4I1 gene_id:259307|Hs108|chr19       ( 589)  356 90.7 5.1e-18


>>CCDS14260.1 MAOA gene_id:4128|Hs108|chrX                (527 aa)
 initn: 3566 init1: 3566 opt: 3566  Z-score: 4401.0  bits: 824.0 E(32554):    0
Smith-Waterman score: 3566; 100.0% identity (100.0% similar) in 527 aa overlap (1-527:1-527)

               10        20        30        40        50        60
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KE4 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KE4 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
              430       440       450       460       470       480

              490       500       510       520       
pF1KE4 VPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 VPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
              490       500       510       520       

>>CCDS59163.1 MAOA gene_id:4128|Hs108|chrX                (394 aa)
 initn: 2692 init1: 2692 opt: 2692  Z-score: 3324.0  bits: 624.3 E(32554): 7.9e-179
Smith-Waterman score: 2692; 100.0% identity (100.0% similar) in 394 aa overlap (134-527:1-394)

           110       120       130       140       150       160   
pF1KE4 KTYPFRGAFPPVWNPIAYLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDK
                                     ::::::::::::::::::::::::::::::
CCDS59                               MGKEIPTDAPWEAQHADKWDKMTMKELIDK
                                             10        20        30

           170       180       190       200       210       220   
pF1KE4 ICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 ICWTKTARRFAYLFVNINVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGS
               40        50        60        70        80        90

           230       240       250       260       270       280   
pF1KE4 GQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHF
              100       110       120       130       140       150

           290       300       310       320       330       340   
pF1KE4 RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 RPELPAERNQLIQRLPMGAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPD
              160       170       180       190       200       210

           350       360       370       380       390       400   
pF1KE4 GSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GSLPAIMGFILARKADRLAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYS
              220       230       240       250       260       270

           410       420       430       440       450       460   
pF1KE4 GGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GGCYTAYFPPGIMTQYGRVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGL
              280       290       300       310       320       330

           470       480       490       500       510       520   
pF1KE4 GKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 GKVTEKDIWVQEPESKDVPAVEITHTFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKL
              340       350       360       370       380       390

           
pF1KE4 LPRS
       ::::
CCDS59 LPRS
           

>>CCDS14261.1 MAOB gene_id:4129|Hs108|chrX                (520 aa)
 initn: 2646 init1: 2611 opt: 2648  Z-score: 3267.7  bits: 614.3 E(32554): 1.1e-175
Smith-Waterman score: 2648; 73.2% identity (90.5% similar) in 514 aa overlap (15-526:6-519)

               10        20        30        40        50        60
pF1KE4 MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEARDRVGGRTYTIRNEHV
                     ::::.::::::..::::: . :..:.::::::::::::::.::..:
CCDS14          MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQKV
                        10        20        30        40        50 

               70        80        90       100       110       120
pF1KE4 DYVDVGGAYVGPTQNRILRLSKELGIETYKVNVSERLVQYVKGKTYPFRGAFPPVWNPIA
        :::.::.::::::::::::.::::.::::::  :::...::::.::::: ::::::::.
CCDS14 KYVDLGGSYVGPTQNRILRLAKELGLETYKVNEVERLIHHVKGKSYPFRGPFPPVWNPIT
              60        70        80        90       100       110 

              130       140       150       160       170       180
pF1KE4 YLDYNNLWRTIDNMGKEIPTDAPWEAQHADKWDKMTMKELIDKICWTKTARRFAYLFVNI
       :::.::.:::.:.::.:::.::::.:  :..::.::::::.::.:::..:...: ::::.
CCDS14 YLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNL
             120       130       140       150       160       170 

              190       200       210       220       230       240
pF1KE4 NVTSEPHEVSALWFLWYVKQCGGTTRIFSVTNGGQERKFVGGSGQVSERIMDLLGDQVKL
        ::.: :::::::::::::::::::::.:.::::::::::::::::::::::::::.:::
CCDS14 CVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKL
             180       190       200       210       220       230 

              250       260       270       280       290       300
pF1KE4 NHPVTHVDQSSDNIIIETLNHEHYECKYVINAIPPTLTAKIHFRPELPAERNQLIQRLPM
       ..:: ..::. .:...:::::: :: ::::.::::::  :::: : ::  :::.: :.:.
CCDS14 ERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPL
             240       250       260       270       280       290 

              310       320       330       340       350       360
pF1KE4 GAVIKCMMYYKEAFWKKKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADR
       :.::::..:::: ::.:::::: :::. :.::.. :::::::.:.  ::::::::.:: .
CCDS14 GSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYTLDDTKPEGNYAAIMGFILAHKARK
             300       310       320       330       340       350 

              370       380       390       400       410       420
pF1KE4 LAKLHKEIRKKKICELYAKVLGSQEALHPVHYEEKNWCEEQYSGGCYTAYFPPGIMTQYG
       ::.: :: : ::.:::::::::: :::.::::::::::::::::::::.::::::.::::
CCDS14 LARLTKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYG
             360       370       380       390       400       410 

              430       440       450       460       470       480
pF1KE4 RVIRQPVGRIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKD
       ::.:::: ::.::::::::.::::::::::::::::::.:...::. : .:: .:::: :
CCDS14 RVLRQPVDRIYFAGTETATHWSGYMEGAVEAGERAAREILHAMGKIPEDEIWQSEPESVD
             420       430       440       450       460       470 

              490       500         510       520       
pF1KE4 VPAVEITHTFWERNLPSVSGLLKIIGFST--SVTALGFVLYKYKLLPRS
       :::  :: :: ::.:::: :::..::..:  :.:::::. .:  :: : 
CCDS14 VPAQPITTTFLERHLPSVPGLLRLIGLTTIFSATALGFLAHKRGLLVRV
             480       490       500       510       520

>>CCDS12787.1 IL4I1 gene_id:259307|Hs108|chr19            (567 aa)
 initn: 331 init1: 189 opt: 356  Z-score: 437.2  bits: 90.7 E(32554): 4.9e-18
Smith-Waterman score: 365; 25.3% identity (52.7% similar) in 490 aa overlap (16-468:62-513)

                              10        20        30        40     
pF1KE4                MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEAR
                                     :.:.:.:..:: :::.:.. : .: .::: 
CCDS12 PFEKCMQDPDYEQLLKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEAD
              40        50        60        70        80        90 

          50        60        70         80        90       100    
pF1KE4 DRVGGRTYTIRNEHVDYVDVGGAYVGPTQNRIL-RLSKELGIETYKVNVSERLVQYVKGK
       .:.::: .: :.... ..   ::.  :...::: .: . ::.     :.. ...:: :. 
CCDS12 NRIGGRIFTYRDQNTGWIGELGAMRMPSSHRILHKLCQGLGL-----NLT-KFTQYDKN-
             100       110       120       130             140     

          110       120         130       140         150          
pF1KE4 TYPFRGAFPPVWNPIAYLDYNN--LWRTIDNMGKEIPTDAPWEAQHA--DKWD---KMTM
                 .:. .  .   :  . .. ...:  .    : :  :.  : ..   ....
CCDS12 ----------TWTEVHEVKLRNYVVEKVPEKLGYAL---RPQEKGHSPEDIYQMALNQAL
                    150       160       170          180       190 

       160       170             180       190       200           
pF1KE4 KELIDKICWTKTARRFA------YLFVNINVTSEPHEVSALWFLWYVKQCGG--------
       :.:    :  :. ..:       ::. . :. :.:    :. .:  : .  :        
CCDS12 KDLKALGC-RKAMKKFERHTLLEYLLGEGNL-SRP----AVQLLGDVMSEDGFFYLSFAE
              200       210       220            230       240     

            210       220       230       240       250       260  
pF1KE4 TTRIFS-VTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHE
       . :  : ...  :  ..:::   . . ... :.  : :: ::. . :.  .. ..  .  
CCDS12 ALRAHSCLSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSP
         250       260       270       280       290       300     

            270             280       290       300       310      
pF1KE4 HYECKYVINAIPPTLTA------KIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWK
         .   :..:    :::      .: : : :: . .. ..:: .  . : .. ... ::.
CCDS12 PARNLKVLKADVVLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWR
         310       320       330       340       350       360     

        320       330       340       350       360       370      
pF1KE4 KKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICEL
       ..   :     . : :  . .     .:.:  . ..  .  :  .: : .:       : 
CCDS12 EEHIEGGH--SNTDRPSRMIFYPPPREGAL-LLASYTWSDAAAAFAGLSRE-------EA
         370         380       390        400       410            

        380        390              400       410       420        
pF1KE4 YAKVLGSQEALH-PVHYEE-------KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVG
          .: .  ::: ::  .        : : :.:.: : ...  ::..          : :
CCDS12 LRLALDDVAALHGPVVRQLWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYG
         420       430       440       450        460       470    

      430       440       450       460       470       480        
pF1KE4 RIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITH
       ::.::: .::    :..: ::... ::: .. .  : ...                    
CCDS12 RIYFAGEHTAYP-HGWVETAVKSALRAAIKINSRKGPASDTASPEGHASDMEGQGHVHGV
          480        490       500       510       520       530   

      490       500       510       520       
pF1KE4 TFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
                                              
CCDS12 ASSPSHDLAKEEGSHPPVQGQLSLQNTTHTRTSH     
           540       550       560            

>>CCDS12786.1 IL4I1 gene_id:259307|Hs108|chr19            (589 aa)
 initn: 331 init1: 189 opt: 356  Z-score: 437.0  bits: 90.7 E(32554): 5.1e-18
Smith-Waterman score: 365; 25.3% identity (52.7% similar) in 490 aa overlap (16-468:84-535)

                              10        20        30        40     
pF1KE4                MENQEKASIAGHMFDVVVIGGGISGLSAAKLLTEYGVSVLVLEAR
                                     :.:.:.:..:: :::.:.. : .: .::: 
CCDS12 PFEKCMQDPDYEQLLKVVTWGLNRTLKPQRVIVVGAGVAGLVAAKVLSDAGHKVTILEAD
            60        70        80        90       100       110   

          50        60        70         80        90       100    
pF1KE4 DRVGGRTYTIRNEHVDYVDVGGAYVGPTQNRIL-RLSKELGIETYKVNVSERLVQYVKGK
       .:.::: .: :.... ..   ::.  :...::: .: . ::.     :.. ...:: :. 
CCDS12 NRIGGRIFTYRDQNTGWIGELGAMRMPSSHRILHKLCQGLGL-----NLT-KFTQYDKN-
           120       130       140       150             160       

          110       120         130       140         150          
pF1KE4 TYPFRGAFPPVWNPIAYLDYNN--LWRTIDNMGKEIPTDAPWEAQHA--DKWD---KMTM
                 .:. .  .   :  . .. ...:  .    : :  :.  : ..   ....
CCDS12 ----------TWTEVHEVKLRNYVVEKVPEKLGYAL---RPQEKGHSPEDIYQMALNQAL
                  170       180       190          200       210   

       160       170             180       190       200           
pF1KE4 KELIDKICWTKTARRFA------YLFVNINVTSEPHEVSALWFLWYVKQCGG--------
       :.:    :  :. ..:       ::. . :. :.:    :. .:  : .  :        
CCDS12 KDLKALGC-RKAMKKFERHTLLEYLLGEGNL-SRP----AVQLLGDVMSEDGFFYLSFAE
           220        230       240            250       260       

            210       220       230       240       250       260  
pF1KE4 TTRIFS-VTNGGQERKFVGGSGQVSERIMDLLGDQVKLNHPVTHVDQSSDNIIIETLNHE
       . :  : ...  :  ..:::   . . ... :.  : :: ::. . :.  .. ..  .  
CCDS12 ALRAHSCLSDRLQYSRIVGGWDLLPRALLSSLSGLVLLNAPVVAMTQGPHDVHVQIETSP
       270       280       290       300       310       320       

            270             280       290       300       310      
pF1KE4 HYECKYVINAIPPTLTA------KIHFRPELPAERNQLIQRLPMGAVIKCMMYYKEAFWK
         .   :..:    :::      .: : : :: . .. ..:: .  . : .. ... ::.
CCDS12 PARNLKVLKADVVLLTASGPAVKRITFSPPLPRHMQEALRRLHYVPATKVFLSFRRPFWR
       330       340       350       360       370       380       

        320       330       340       350       360       370      
pF1KE4 KKDYCGCMIIEDEDAPISITLDDTKPDGSLPAIMGFILARKADRLAKLHKEIRKKKICEL
       ..   :     . : :  . .     .:.:  . ..  .  :  .: : .:       : 
CCDS12 EEHIEGGH--SNTDRPSRMIFYPPPREGAL-LLASYTWSDAAAAFAGLSRE-------EA
       390         400       410        420       430              

        380        390              400       410       420        
pF1KE4 YAKVLGSQEALH-PVHYEE-------KNWCEEQYSGGCYTAYFPPGIMTQYGRVIRQPVG
          .: .  ::: ::  .        : : :.:.: : ...  ::..          : :
CCDS12 LRLALDDVAALHGPVVRQLWDGTGVVKRWAEDQHSQGGFVVQ-PPALWQTEKDDWTVPYG
       440       450       460       470        480       490      

      430       440       450       460       470       480        
pF1KE4 RIFFAGTETATKWSGYMEGAVEAGERAAREVLNGLGKVTEKDIWVQEPESKDVPAVEITH
       ::.::: .::    :..: ::... ::: .. .  : ...                    
CCDS12 RIYFAGEHTAYP-HGWVETAVKSALRAAIKINSRKGPASDTASPEGHASDMEGQGHVHGV
        500        510       520       530       540       550     

      490       500       510       520       
pF1KE4 TFWERNLPSVSGLLKIIGFSTSVTALGFVLYKYKLLPRS
                                              
CCDS12 ASSPSHDLAKEEGSHPPVQGQLSLQNTTHTRTSH     
         560       570       580              




527 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 00:25:17 2016 done: Sun Nov  6 00:25:18 2016
 Total Scan time:  3.020 Total Display time:  0.060

Function used was FASTA [36.3.4 Apr, 2011]
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