Result of FASTA (omim) for pFN21AB6323
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6323, 261 aa
  1>>>pF1KB6323 261 - 261 aa - 261 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0337+/-0.000313; mu= 16.7818+/- 0.020
 mean_var=72.3340+/-14.411, 0's: 0 Z-trim(117.4): 312  B-trim: 29 in 1/55
 Lambda= 0.150801
 statistics sampled from 28992 (29317) to 28992 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.344), width:  16
 Scan time:  7.260

The best scores are:                                      opt bits E(85289)
NP_005542 (OMIM: 147960) kallikrein-2 isoform 1 pr ( 261) 1863 414.0 1.4e-115
NP_001002231 (OMIM: 147960) kallikrein-2 isoform 2 ( 223) 1493 333.4 2.1e-91
NP_001639 (OMIM: 176820) prostate-specific antigen ( 261) 1446 323.3 2.8e-88
NP_002248 (OMIM: 147910,615953) kallikrein-1 prepr ( 262) 1228 275.8 5.3e-74
NP_001243009 (OMIM: 147960) kallikrein-2 isoform 3 ( 159) 1108 249.6 2.6e-66
NP_001025218 (OMIM: 176820) prostate-specific anti ( 238) 1103 248.6 7.6e-66
NP_001025219 (OMIM: 176820) prostate-specific anti ( 218)  902 204.9   1e-52
NP_056411 (OMIM: 605505) kallikrein-13 precursor [ ( 277)  794 181.4 1.5e-45
NP_001129504 (OMIM: 604434) kallikrein-11 isoform  ( 250)  780 178.4 1.1e-44
NP_006844 (OMIM: 604434) kallikrein-11 isoform 1 p ( 250)  780 178.4 1.1e-44
NP_659196 (OMIM: 604434) kallikrein-11 isoform 2 [ ( 282)  780 178.4 1.2e-44
XP_011525244 (OMIM: 147910,615953) PREDICTED: kall ( 160)  717 164.5 1.1e-40
NP_036447 (OMIM: 605504) kallikrein-9 precursor [H ( 250)  707 162.5 6.8e-40
NP_001290343 (OMIM: 167800,601564) trypsin-2 isofo ( 261)  610 141.4 1.6e-33
XP_011524674 (OMIM: 604434) PREDICTED: kallikrein- ( 275)  584 135.8 8.3e-32
NP_001161077 (OMIM: 604434) kallikrein-11 isoform  ( 275)  584 135.8 8.3e-32
XP_011524672 (OMIM: 604434) PREDICTED: kallikrein- ( 275)  584 135.8 8.3e-32
XP_011524675 (OMIM: 604434) PREDICTED: kallikrein- ( 275)  584 135.8 8.3e-32
XP_011524673 (OMIM: 604434) PREDICTED: kallikrein- ( 275)  584 135.8 8.3e-32
XP_011524671 (OMIM: 604434) PREDICTED: kallikrein- ( 307)  584 135.8   9e-32
NP_002767 (OMIM: 602673) kallikrein-10 preproprote ( 276)  576 134.0 2.8e-31
XP_005259118 (OMIM: 602673) PREDICTED: kallikrein- ( 276)  576 134.0 2.8e-31
XP_006723352 (OMIM: 602673) PREDICTED: kallikrein- ( 276)  576 134.0 2.8e-31
XP_006723350 (OMIM: 602673) PREDICTED: kallikrein- ( 276)  576 134.0 2.8e-31
NP_001070968 (OMIM: 602673) kallikrein-10 prepropr ( 276)  576 134.0 2.8e-31
NP_665895 (OMIM: 602673) kallikrein-10 preproprote ( 276)  576 134.0 2.8e-31
XP_016882482 (OMIM: 602673) PREDICTED: kallikrein- ( 276)  576 134.0 2.8e-31
XP_005259119 (OMIM: 602673) PREDICTED: kallikrein- ( 276)  576 134.0 2.8e-31
NP_059979 (OMIM: 610601) kallikrein-15 isoform 4 p ( 256)  575 133.8 3.1e-31
XP_006723328 (OMIM: 610601) PREDICTED: kallikrein- ( 256)  575 133.8 3.1e-31
XP_011525387 (OMIM: 610601) PREDICTED: kallikrein- ( 255)  567 132.0   1e-30
NP_001264010 (OMIM: 610601) kallikrein-15 isoform  ( 255)  567 132.0   1e-30
NP_003285 (OMIM: 191080) tryptase alpha/beta-1 pre ( 275)  532 124.4 2.1e-28
NP_001305325 (OMIM: 229000,612423) plasma kallikre ( 436)  523 122.6 1.2e-27
XP_016863673 (OMIM: 229000,612423) PREDICTED: plas ( 436)  523 122.6 1.2e-27
NP_000883 (OMIM: 229000,612423) plasma kallikrein  ( 638)  523 122.8 1.6e-27
XP_016863670 (OMIM: 229000,612423) PREDICTED: plas ( 649)  523 122.8 1.6e-27
XP_011530232 (OMIM: 229000,612423) PREDICTED: plas ( 649)  523 122.8 1.6e-27
NP_077078 (OMIM: 191081) tryptase beta-2 prepropro ( 275)  517 121.2   2e-27
NP_001919 (OMIM: 134350,613912) complement factor  ( 253)  516 120.9 2.2e-27
NP_001275679 (OMIM: 606751) transmembrane protease ( 413)  512 120.2 5.9e-27
NP_001275680 (OMIM: 606751) transmembrane protease ( 448)  512 120.3 6.3e-27
NP_110397 (OMIM: 606751) transmembrane protease se ( 457)  512 120.3 6.4e-27
NP_002095 (OMIM: 600784) granzyme K precursor [Hom ( 264)  509 119.4 6.6e-27
NP_001304264 (OMIM: 134350,613912) complement fact ( 260)  505 118.6 1.2e-26
NP_071402 (OMIM: 609343) brain-specific serine pro ( 317)  501 117.7 2.5e-26
XP_005255530 (OMIM: 609343) PREDICTED: brain-speci ( 317)  501 117.7 2.5e-26
NP_002760 (OMIM: 167800,276000,614044) trypsin-1 p ( 247)  496 116.6 4.4e-26
XP_011514713 (OMIM: 167800,276000,614044) PREDICTE ( 472)  496 116.8 7.3e-26
NP_001298111 (OMIM: 606135) kallikrein-14 prepropr ( 267)  493 115.9 7.4e-26


>>NP_005542 (OMIM: 147960) kallikrein-2 isoform 1 prepro  (261 aa)
 initn: 1863 init1: 1863 opt: 1863  Z-score: 2196.2  bits: 414.0 E(85289): 1.4e-115
Smith-Waterman score: 1863; 100.0% identity (100.0% similar) in 261 aa overlap (1-261:1-261)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
              190       200       210       220       230       240

              250       260 
pF1KB6 AVYTKVVHYRKWIKDTIAANP
       :::::::::::::::::::::
NP_005 AVYTKVVHYRKWIKDTIAANP
              250       260 

>>NP_001002231 (OMIM: 147960) kallikrein-2 isoform 2 pre  (223 aa)
 initn: 1493 init1: 1493 opt: 1493  Z-score: 1762.0  bits: 333.4 E(85289): 2.1e-91
Smith-Waterman score: 1493; 100.0% identity (100.0% similar) in 210 aa overlap (1-210:1-210)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
       ::::::::::::::::::::::::::::::                              
NP_001 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGVSHPYSQHLEGKG                 
              190       200       210       220                    

>>NP_001639 (OMIM: 176820) prostate-specific antigen iso  (261 aa)
 initn: 1446 init1: 1446 opt: 1446  Z-score: 1705.8  bits: 323.3 E(85289): 2.8e-88
Smith-Waterman score: 1446; 77.0% identity (91.2% similar) in 261 aa overlap (1-261:1-261)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       ::  :. ..:::   ::.::: :::::::::::::::::: : :.: : :::::::::::
NP_001 MWVPVVFLTLSVTWIGAAPLILSRIVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::....: . ::::.::.::::::   ::::::::::.:::::.. ::: .:::::
NP_001 LTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
       ::::::::::..::.:::. :::::::::::::::::::::::::: :..::::.::..:
NP_001 LMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
       ::.::... .:::.:::::: :::::.::.:::::::::::::::::::: :::::::.:
NP_001 NDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNGVLQGITSWGSEPCALPERP
              190       200       210       220       230       240

              250       260 
pF1KB6 AVYTKVVHYRKWIKDTIAANP
       ..:::::::::::::::.:::
NP_001 SLYTKVVHYRKWIKDTIVANP
              250       260 

>>NP_002248 (OMIM: 147910,615953) kallikrein-1 prepropro  (262 aa)
 initn: 1227 init1: 635 opt: 1228  Z-score: 1449.5  bits: 275.8 E(85289): 5.3e-74
Smith-Waterman score: 1228; 65.9% identity (84.3% similar) in 261 aa overlap (1-260:1-261)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       :: ::: .:::.: :::.: ::::::::::::.::::::.:.:  .  .:::.::: :::
NP_002 MWFLVLCLALSLGGTGAAPPIQSRIVGGWECEQHSQPWQAALYHFSTFQCGGILVHRQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::.. : :.::::::::. :.:.: : ::.::::: .:::::.... . ::: :::
NP_002 LTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHD
               70        80        90       100       110       120

              130        140       150       160       170         
pF1KB6 LMLLRLSEPAK-ITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLL
       ::::::.:::  :::.:::. :::.:: .:.:: ::::::::::.:  : .::::.:..:
NP_002 LMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKIL
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KB6 SNDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEK
        :: : .:. .:::.::::.:   :::::: :::::::.:.:::::.::::  ::. :.:
NP_002 PNDECKKAHVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNK
              190       200       210       220       230       240

     240       250       260 
pF1KB6 PAVYTKVVHYRKWIKDTIAANP
       :.: ..:. : :::.:::: : 
NP_002 PSVAVRVLSYVKWIEDTIAENS
              250       260  

>>NP_001243009 (OMIM: 147960) kallikrein-2 isoform 3 [Ho  (159 aa)
 initn: 1108 init1: 1108 opt: 1108  Z-score: 1311.4  bits: 249.6 E(85289): 2.6e-66
Smith-Waterman score: 1108; 100.0% identity (100.0% similar) in 159 aa overlap (103-261:1-159)

             80        90       100       110       120       130  
pF1KB6 VWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHDLMLLRLSEPAKI
                                     ::::::::::::::::::::::::::::::
NP_001                               MSLLKHQSLRPDEDSSHDLMLLRLSEPAKI
                                             10        20        30

            140       150       160       170       180       190  
pF1KB6 TDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLSNDMCARAYSEKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLSNDMCARAYSEKV
               40        50        60        70        80        90

            200       210       220       230       240       250  
pF1KB6 TEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKPAVYTKVVHYRKW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKPAVYTKVVHYRKW
              100       110       120       130       140       150

            260 
pF1KB6 IKDTIAANP
       :::::::::
NP_001 IKDTIAANP
                

>>NP_001025218 (OMIM: 176820) prostate-specific antigen   (238 aa)
 initn: 1103 init1: 1103 opt: 1103  Z-score: 1303.1  bits: 248.6 E(85289): 7.6e-66
Smith-Waterman score: 1103; 74.2% identity (89.5% similar) in 209 aa overlap (1-209:1-209)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       ::  :. ..:::   ::.::: :::::::::::::::::: : :.: : :::::::::::
NP_001 MWVPVVFLTLSVTWIGAAPLILSRIVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::....: . ::::.::.::::::   ::::::::::.:::::.. ::: .:::::
NP_001 LTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
       ::::::::::..::.:::. :::::::::::::::::::::::::: :..::::.::..:
NP_001 LMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVIS
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
       ::.::... .:::.:::::: :::::.::                               
NP_001 NDVCAQVHPQKVTKFMLCAGRWTGGKSTCSWVILITELTMPALPMVLHGSLVPWRGGV  
              190       200       210       220       230          

>>NP_001025219 (OMIM: 176820) prostate-specific antigen   (218 aa)
 initn: 894 init1: 894 opt: 902  Z-score: 1067.3  bits: 204.9 E(85289): 1e-52
Smith-Waterman score: 1152; 65.9% identity (77.0% similar) in 261 aa overlap (1-261:1-218)

               10        20        30        40        50        60
pF1KB6 MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQWV
       ::  :. ..:::   ::.::: :::::::::::::::::: : :.: : :::::::::::
NP_001 MWVPVVFLTLSVTWIGAAPLILSRIVGGWECEKHSQPWQVLVASRGRAVCGGVLVHPQWV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 LTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSSHD
       ::::::..:                                           : .:::::
NP_001 LTAAHCIRK-------------------------------------------PGDDSSHD
                                                          70       

              130       140       150       160       170       180
pF1KB6 LMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHLLS
       ::::::::::..::.:::. :::::::::::::::::::::::::: :..::::.::..:
NP_001 LMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVIS
        80        90       100       110       120       130       

              190       200       210       220       230       240
pF1KB6 NDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPEKP
       ::.::... .:::.:::::: :::::.::.:::::::::::::::::::: :::::::.:
NP_001 NDVCAQVHPQKVTKFMLCAGRWTGGKSTCSGDSGGPLVCNGVLQGITSWGSEPCALPERP
       140       150       160       170       180       190       

              250       260 
pF1KB6 AVYTKVVHYRKWIKDTIAANP
       ..:::::::::::::::.:::
NP_001 SLYTKVVHYRKWIKDTIVANP
       200       210        

>>NP_056411 (OMIM: 605505) kallikrein-13 precursor [Homo  (277 aa)
 initn: 816 init1: 439 opt: 794  Z-score: 938.9  bits: 181.4 E(85289): 1.5e-45
Smith-Waterman score: 794; 45.2% identity (68.1% similar) in 270 aa overlap (1-257:1-262)

                10        20                  30        40         
pF1KB6 MWDLVLSIA-LSVGCTGAVPLIQSRIV----------GGWECEKHSQPWQVAVYSHGWAH
       :: :.: :: :... .:.:   .:...          ::. :  ::::::.:.  .:   
NP_056 MWPLALVIASLTLALSGGVSQESSKVLNTNGTSGFLPGGYTCFPHSQPWQAALLVQGRLL
               10        20        30        40        50        60

      50        60        70        80        90       100         
pF1KB6 CGGVLVHPQWVLTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQ
       ::::::::.::::::::::.. .:.::.: : . :   :   : ::.::: :  :     
NP_056 CGGVLVHPKWVLTAAHCLKEGLKVYLGKHALGRVEAGEQVREVVHSIPHPEYRRS-----
               70        80        90       100       110          

     110        120       130       140        150       160       
pF1KB6 SLRPDE-DSSHDLMLLRLSEPAKITDVVKVLGLPTQEPAL-GTTCYASGWGSIEPEEFLR
          : . . .::.:::.:. :...:  ...: :  ..    :::: .::::.    .   
NP_056 ---PTHLNHDHDIMLLELQSPVQLTGYIQTLPLSHNNRLTPGTTCRVSGWGTTTSPQVNY
            120       130       140       150       160       170  

       170       180       190       200       210       220       
pF1KB6 PRSLQCVSLHLLSNDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGIT
       :..:::....: :.. : ..:  :.:. :::::   ::::.: :::::::::: .: ::.
NP_056 PKTLQCANIQLRSDEECRQVYPGKITDNMLCAGTKEGGKDSCEGDSGGPLVCNRTLYGIV
            180       190       200       210       220       230  

       230       240       250       260            
pF1KB6 SWGPEPCALPEKPAVYTKVVHYRKWIKDTIAANP           
       :::  ::. :..:.:::.: .:  ::..::               
NP_056 SWGDFPCGQPDRPGVYTRVSRYVLWIRETIRKYETQQQKWLKGPQ
            240       250       260       270       

>>NP_001129504 (OMIM: 604434) kallikrein-11 isoform 1 pr  (250 aa)
 initn: 755 init1: 471 opt: 780  Z-score: 923.0  bits: 178.4 E(85289): 1.1e-44
Smith-Waterman score: 786; 44.0% identity (70.8% similar) in 257 aa overlap (4-260:6-250)

                 10        20        30        40        50        
pF1KB6   MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQ
            :.: .::..: .:.    ..::. :.::. ::::::.:.. .    ::..:. :.
NP_001 MRILQLIL-LALATGLVGG----ETRIIKGFECKPHSQPWQAALFEKTRLLCGATLIAPR
                10            20        30        40        50     

       60        70        80        90       100       110        
pF1KB6 WVLTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSS
       :.::::::::    : ::.::: . :   :   ...::::: .: ::       :..:  
NP_001 WLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSL-------PNKDHR
          60        70        80        90       100               

      120       130       140       150       160       170        
pF1KB6 HDLMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHL
       .:.::.... :..:: .:. : : ..  . ::.:  :::::    ..  :..:.:... .
NP_001 NDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITI
      110       120       130       140       150       160        

      180       190       200       210       220       230        
pF1KB6 LSNDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPE
       . .. :  ::  ..:. :.::..  ::::.: ::::::::::  :::: ::: .:::. .
NP_001 IEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITR
      170       180       190       200       210       220        

      240       250       260 
pF1KB6 KPAVYTKVVHYRKWIKDTIAANP
       ::.::::: .:  ::..:.  : 
NP_001 KPGVYTKVCKYVDWIQETMKNN 
      230       240       250 

>>NP_006844 (OMIM: 604434) kallikrein-11 isoform 1 precu  (250 aa)
 initn: 755 init1: 471 opt: 780  Z-score: 923.0  bits: 178.4 E(85289): 1.1e-44
Smith-Waterman score: 786; 44.0% identity (70.8% similar) in 257 aa overlap (4-260:6-250)

                 10        20        30        40        50        
pF1KB6   MWDLVLSIALSVGCTGAVPLIQSRIVGGWECEKHSQPWQVAVYSHGWAHCGGVLVHPQ
            :.: .::..: .:.    ..::. :.::. ::::::.:.. .    ::..:. :.
NP_006 MRILQLIL-LALATGLVGG----ETRIIKGFECKPHSQPWQAALFEKTRLLCGATLIAPR
                10            20        30        40        50     

       60        70        80        90       100       110        
pF1KB6 WVLTAAHCLKKNSQVWLGRHNLFEPEDTGQRVPVSHSFPHPLYNMSLLKHQSLRPDEDSS
       :.::::::::    : ::.::: . :   :   ...::::: .: ::       :..:  
NP_006 WLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSL-------PNKDHR
          60        70        80        90       100               

      120       130       140       150       160       170        
pF1KB6 HDLMLLRLSEPAKITDVVKVLGLPTQEPALGTTCYASGWGSIEPEEFLRPRSLQCVSLHL
       .:.::.... :..:: .:. : : ..  . ::.:  :::::    ..  :..:.:... .
NP_006 NDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITI
      110       120       130       140       150       160        

      180       190       200       210       220       230        
pF1KB6 LSNDMCARAYSEKVTEFMLCAGLWTGGKDTCGGDSGGPLVCNGVLQGITSWGPEPCALPE
       . .. :  ::  ..:. :.::..  ::::.: ::::::::::  :::: ::: .:::. .
NP_006 IEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITR
      170       180       190       200       210       220        

      240       250       260 
pF1KB6 KPAVYTKVVHYRKWIKDTIAANP
       ::.::::: .:  ::..:.  : 
NP_006 KPGVYTKVCKYVDWIQETMKNN 
      230       240       250 




261 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 23:17:03 2016 done: Sun Nov  6 23:17:04 2016
 Total Scan time:  7.260 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com