FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1544, 450 aa 1>>>pF1KE1544 450 - 450 aa - 450 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1027+/-0.00105; mu= 14.1853+/- 0.062 mean_var=116.5073+/-23.754, 0's: 0 Z-trim(106.6): 129 B-trim: 0 in 0/52 Lambda= 0.118822 statistics sampled from 8909 (9054) to 8909 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.646), E-opt: 0.2 (0.278), width: 16 Scan time: 2.920 The best scores are: opt bits E(32554) CCDS10554.1 BFAR gene_id:51283|Hs108|chr16 ( 450) 3102 543.2 1.9e-154 CCDS81947.1 BFAR gene_id:51283|Hs108|chr16 ( 325) 1629 290.6 1.6e-78 >>CCDS10554.1 BFAR gene_id:51283|Hs108|chr16 (450 aa) initn: 3102 init1: 3102 opt: 3102 Z-score: 2886.2 bits: 543.2 E(32554): 1.9e-154 Smith-Waterman score: 3102; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450) 10 20 30 40 50 60 pF1KE1 MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 WWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 WWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 KWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAIL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN 370 380 390 400 410 420 430 440 450 pF1KE1 CLFYWALYFNPIINIDLVVKELRRLETQVL :::::::::::::::::::::::::::::: CCDS10 CLFYWALYFNPIINIDLVVKELRRLETQVL 430 440 450 >>CCDS81947.1 BFAR gene_id:51283|Hs108|chr16 (325 aa) initn: 1629 init1: 1629 opt: 1629 Z-score: 1523.3 bits: 290.6 E(32554): 1.6e-78 Smith-Waterman score: 2011; 72.2% identity (72.2% similar) in 450 aa overlap (1-450:1-325) 10 20 30 40 50 60 pF1KE1 MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MEEPQKSYVNTMDLERDEPLKSTGPQISVSEFSCHCCYDILVNPTTLNCGHSFCRHCLAL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 WWASSKKTECPECREKWEGFPKVSILLRDAIEKLFPDAIRLRFEDIQQNNDIVQSLAAFQ :::::::::::::::::::::::::::: CCDS81 WWASSKKTECPECREKWEGFPKVSILLR-------------------------------- 70 80 130 140 150 160 170 180 pF1KE1 KYGNDQIPLAPNTGRANQQMGGGFFSGVLTALTGVAVVLLVYHWSSRESEHDLLVHKAVA CCDS81 ------------------------------------------------------------ 190 200 210 220 230 240 pF1KE1 KWTAEEVVLWLEQLGPWASLYRERFLSERVNGRLLLTLTEEEFSKTPYTIENSSHRRAIL ::::::::::::::::::::::::::: CCDS81 ---------------------------------LLLTLTEEEFSKTPYTIENSSHRRAIL 90 100 110 250 260 270 280 290 300 pF1KE1 MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 MELERVKALGVKPPQNLWEYKAVNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTFLPFIH 120 130 140 150 160 170 310 320 330 340 350 360 pF1KE1 TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 TICPLQEDSSGEDIVTKLLDLKEPTWKQWREFLVKYSFLPYQLIAEFAWDWLEVHYWTSR 180 190 200 210 220 230 370 380 390 400 410 420 pF1KE1 FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS81 FLIINAMLLSVLELFSFWRIWSRSELKTVPQRMWSHFWKVSTQGLFVAMFWPLIPQFVCN 240 250 260 270 280 290 430 440 450 pF1KE1 CLFYWALYFNPIINIDLVVKELRRLETQVL :::::::::::::::::::::::::::::: CCDS81 CLFYWALYFNPIINIDLVVKELRRLETQVL 300 310 320 450 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 23:20:56 2016 done: Sun Nov 6 23:20:57 2016 Total Scan time: 2.920 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]