Result of FASTA (ccds) for
pFN21AB5329
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB5329, 166 aa
1>>>pF1KB5329 166 - 166 aa - 166 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.9242+/-0.000617; mu= 14.1317+/- 0.037
mean_var=56.1401+/-11.296, 0's: 0 Z-trim(109.6): 37 B-trim: 0 in 0/51
Lambda= 0.171174
statistics sampled from 10946 (10983) to 10946 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.723), E-opt: 0.2 (0.337), width: 16
Scan time: 1.440
The best scores are: opt bits E(32554)
CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 ( 166) 1153 292.2 1e-79
CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 ( 490) 544 142.0 4.6e-34
CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 ( 616) 544 142.1 5.6e-34
CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 ( 646) 544 142.1 5.9e-34
CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 ( 520) 514 134.6 8.3e-32
CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 ( 527) 514 134.6 8.4e-32
CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 ( 212) 505 132.2 1.8e-31
CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 ( 216) 485 127.3 5.7e-30
CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 ( 161) 478 125.5 1.5e-29
CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 ( 381) 477 125.4 3.6e-29
CCDS3982.2 CWC27 gene_id:10283|Hs108|chr5 ( 472) 477 125.5 4.3e-29
CCDS5494.1 PPIA gene_id:5478|Hs108|chr7 ( 165) 432 114.1 3.9e-26
CCDS7358.1 PPIF gene_id:10105|Hs108|chr10 ( 207) 414 109.7 1e-24
CCDS34550.1 PPIL4 gene_id:85313|Hs108|chr6 ( 492) 402 107.0 1.7e-23
CCDS443.1 PPIE gene_id:10450|Hs108|chr1 ( 301) 396 105.4 3.1e-23
CCDS72898.1 PPIAL4C gene_id:653598|Hs108|chr1 ( 164) 393 104.5 3.1e-23
CCDS59199.1 PPIAL4D gene_id:645142|Hs108|chr1 ( 164) 392 104.2 3.7e-23
CCDS76202.1 PPIAL4F gene_id:728945|Hs108|chr1 ( 164) 392 104.2 3.7e-23
CCDS76201.1 PPIAL4E gene_id:730262|Hs108|chr1 ( 164) 392 104.2 3.7e-23
CCDS442.1 PPIE gene_id:10450|Hs108|chr1 ( 296) 394 104.9 4.3e-23
CCDS53299.1 PPIE gene_id:10450|Hs108|chr1 ( 314) 394 104.9 4.5e-23
CCDS41375.2 PPIAL4G gene_id:644591|Hs108|chr1 ( 164) 386 102.8 1e-22
CCDS469.1 PPIH gene_id:10465|Hs108|chr1 ( 177) 386 102.8 1.1e-22
CCDS76197.1 PPIAL4A gene_id:653505|Hs108|chr1 ( 164) 378 100.8 4e-22
CCDS81308.1 PPIH gene_id:10465|Hs108|chr1 ( 134) 360 96.3 7.4e-21
CCDS3801.1 PPID gene_id:5481|Hs108|chr4 ( 370) 356 95.5 3.5e-20
CCDS2702.1 NKTR gene_id:4820|Hs108|chr3 (1462) 361 97.1 4.7e-20
CCDS2235.1 PPIG gene_id:9360|Hs108|chr2 ( 754) 356 95.7 6.3e-20
CCDS2079.1 RANBP2 gene_id:5903|Hs108|chr2 (3224) 352 95.0 4.3e-19
CCDS75592.1 PPIA gene_id:5478|Hs108|chr7 ( 105) 325 87.6 2.4e-18
CCDS2332.1 PPIL3 gene_id:53938|Hs108|chr2 ( 165) 289 78.8 1.7e-15
CCDS69169.1 PPIL6 gene_id:285755|Hs108|chr6 ( 279) 288 78.7 3.1e-15
CCDS5074.1 PPIL6 gene_id:285755|Hs108|chr6 ( 311) 288 78.7 3.4e-15
>>CCDS4826.1 PPIL1 gene_id:51645|Hs108|chr6 (166 aa)
initn: 1153 init1: 1153 opt: 1153 Z-score: 1544.9 bits: 292.2 E(32554): 1e-79
Smith-Waterman score: 1153; 100.0% identity (100.0% similar) in 166 aa overlap (1-166:1-166)
10 20 30 40 50 60
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB5 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
70 80 90 100 110 120
130 140 150 160
pF1KB5 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG
::::::::::::::::::::::::::::::::::::::::::::::
CCDS48 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG
130 140 150 160
>>CCDS64162.1 PPWD1 gene_id:23398|Hs108|chr5 (490 aa)
initn: 509 init1: 509 opt: 544 Z-score: 724.9 bits: 142.0 E(32554): 4.6e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:340-485)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
..:::: : .:. . ::: .:: .:
CCDS64 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
310 320 330 340 350 360
50 60 70 80 90 100
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
::::: :::::: :::: ::::::: :: ::.: .::::.: :. :.:::::
CCDS64 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
370 380 390 400 410 420
110 120 130 140 150 160
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
.:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::
CCDS64 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
430 440 450 460 470 480
pF1KB5 SG
CCDS64 K
490
>>CCDS64161.1 PPWD1 gene_id:23398|Hs108|chr5 (616 aa)
initn: 509 init1: 509 opt: 544 Z-score: 723.4 bits: 142.1 E(32554): 5.6e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:466-611)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
..:::: : .:. . ::: .:: .:
CCDS64 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
440 450 460 470 480 490
50 60 70 80 90 100
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
::::: :::::: :::: ::::::: :: ::.: .::::.: :. :.:::::
CCDS64 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
500 510 520 530 540 550
110 120 130 140 150 160
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
.:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::
CCDS64 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
560 570 580 590 600 610
pF1KB5 SG
CCDS64 K
>>CCDS3985.1 PPWD1 gene_id:23398|Hs108|chr5 (646 aa)
initn: 509 init1: 509 opt: 544 Z-score: 723.1 bits: 142.1 E(32554): 5.9e-34
Smith-Waterman score: 544; 56.2% identity (76.7% similar) in 146 aa overlap (16-160:496-641)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARR
..:::: : .:. . ::: .:: .:
CCDS39 RDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRN
470 480 490 500 510 520
50 60 70 80 90 100
pF1KB5 GYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGP
::::: :::::: :::: ::::::: :: ::.: .::::.: :. :.:::::
CCDS39 GYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGS
530 540 550 560 570 580
110 120 130 140 150 160
pF1KB5 DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKAYP
.:::::::.:..:: :::.:::.:::: .:. .:.:.. :..: . :.: .::.::
CCDS39 NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV
590 600 610 620 630 640
pF1KB5 SG
CCDS39 K
>>CCDS13793.1 PPIL2 gene_id:23759|Hs108|chr22 (520 aa)
initn: 496 init1: 472 opt: 514 Z-score: 684.5 bits: 134.6 E(32554): 8.3e-32
Smith-Waterman score: 514; 51.7% identity (77.6% similar) in 147 aa overlap (14-159:282-428)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA
: :.:. : . :::. .::::.:: .:
CCDS13 STAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLC
260 270 280 290 300 310
50 60 70 80 90 100
pF1KB5 RRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANA
.. ::.:: ::: :..:.:::::::::: :: : .:: :.::..:.:. :: :::.:::.
CCDS13 KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANS
320 330 340 350 360 370
110 120 130 140 150 160
pF1KB5 GPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKA
::..: ::::.:. .:: :::::::: :. ... . ::.. . ::: ....:
CCDS13 GPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDAT
380 390 400 410 420 430
pF1KB5 YPSG
CCDS13 TVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATKR
440 450 460 470 480 490
>>CCDS46670.1 PPIL2 gene_id:23759|Hs108|chr22 (527 aa)
initn: 496 init1: 472 opt: 514 Z-score: 684.4 bits: 134.6 E(32554): 8.4e-32
Smith-Waterman score: 514; 51.7% identity (77.6% similar) in 147 aa overlap (14-159:282-428)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA
: :.:. : . :::. .::::.:: .:
CCDS46 STAMVPETTHEAAAIDEDVLRYQFVKKKGYVRLHTNKGDLNLELHCDLTPKTCENFIRLC
260 270 280 290 300 310
50 60 70 80 90 100
pF1KB5 RRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANA
.. ::.:: ::: :..:.:::::::::: :: : .:: :.::..:.:. :: :::.:::.
CCDS46 KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGRGILSMANS
320 330 340 350 360 370
110 120 130 140 150 160
pF1KB5 GPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQ-DRPVDDVKIIKA
::..: ::::.:. .:: :::::::: :. ... . ::.. . ::: ....:
CCDS46 GPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDAT
380 390 400 410 420 430
pF1KB5 YPSG
CCDS46 TVFVDPYEEADAQIAQERKTQLKVAPETKVKSSQPQAGSQGPQTFRQGVGKYINPAATEQ
440 450 460 470 480 490
>>CCDS4133.1 PPIC gene_id:5480|Hs108|chr5 (212 aa)
initn: 477 init1: 353 opt: 505 Z-score: 678.4 bits: 132.2 E(32554): 1.8e-31
Smith-Waterman score: 505; 52.7% identity (77.3% similar) in 150 aa overlap (17-162:48-196)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA--R
. ..: ::. :. : .::: .::. :: .
CCDS41 GALVFSSGAEGFRKRGPSVTAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGE
20 30 40 50 60 70
50 60 70 80 90 100
pF1KB5 RGY-YNGTKFHRIIKDFMIQGGD-PTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMAN
.:: :.:.::::.:::::::::: :: : ::.::::. : :: . :: : : ..:::
CCDS41 KGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDE-NFKLKHYGIGWVSMAN
80 90 100 110 120 130
110 120 130 140 150 160
pF1KB5 AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKA
:::::::::::.::. ::::::..::.: .:. .:. . . :...:::. . .::..
CCDS41 AGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINS
140 150 160 170 180 190
pF1KB5 YPSG
CCDS41 GKIDVKTPFVVEIADW
200 210
>>CCDS10191.1 PPIB gene_id:5479|Hs108|chr15 (216 aa)
initn: 491 init1: 349 opt: 485 Z-score: 651.6 bits: 127.3 E(32554): 5.7e-30
Smith-Waterman score: 485; 51.7% identity (76.2% similar) in 147 aa overlap (17-159:54-199)
10 20 30 40
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELA--R
. ..: ... :. : .::: ::. :: .
CCDS10 FLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGE
30 40 50 60 70 80
50 60 70 80 90 100
pF1KB5 RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQFEDELHPDLKFTGAGILAMAN
.:. :...::::.:::::::::: : : : :: ::::..: :: . :: : : ..:::
CCDS10 KGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDE-NFKLKHYGPGWVSMAN
90 100 110 120 130 140
110 120 130 140 150 160
pF1KB5 AGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKA
:: ::::::::.: . : ::::::..::.: .:. .: .: ..:.:.:.:. :: :
CCDS10 AGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADC
150 160 170 180 190 200
pF1KB5 YPSG
CCDS10 GKIEVEKPFAIAKE
210
>>CCDS2333.1 PPIL3 gene_id:53938|Hs108|chr2 (161 aa)
initn: 448 init1: 424 opt: 478 Z-score: 644.2 bits: 125.5 E(32554): 1.5e-29
Smith-Waterman score: 478; 49.3% identity (74.3% similar) in 148 aa overlap (13-159:2-149)
10 20 30 40 50 60
pF1KB5 MAAIPPDSWQPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDF
.: :.:..: : .:.. ...::::.:: : .:::: ::: :: :
CCDS23 MSVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGF
10 20 30 40
70 80 90 100 110 120
pF1KB5 MIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQ
:.: :::::::::: ::.::.:::: :: . :...::: ::.:::::::.: .
CCDS23 MVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQP
50 60 70 80 90 100
130 140 150 160
pF1KB5 WLDGKHTIFGRVCQGIGMVNRVGMVETNSQD-RPVDDVKIIKAYPSG
:: :.:.::.: .:. .... . .: . ::..::.:
CCDS23 HLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ
110 120 130 140 150 160
>>CCDS75252.1 CWC27 gene_id:10283|Hs108|chr5 (381 aa)
initn: 475 init1: 452 opt: 477 Z-score: 637.2 bits: 125.4 E(32554): 3.6e-29
Smith-Waterman score: 477; 49.0% identity (74.2% similar) in 155 aa overlap (10-159:8-161)
10 20 30 40 50
pF1KB5 MAAIPPDSWQPPN---VYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRII
.::. : :.:. : : .::. :.:::.:.:: .: ..::..: :::..
CCDS75 MSNIYIQEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVV
10 20 30 40 50
60 70 80 90 100 110
pF1KB5 KDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLA
:..::::::::: :: :::: :.::.: :.:. :..:::::: :::::: ::.
CCDS75 PGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLG
60 70 80 90 100 110
120 130 140 150 160
pF1KB5 PTQWLDGKHTIFGRVCQGIGMVN--RVGMVETNSQDRPVDDVKIIKAYPSG
.. :..::::::.: : . : :.. :. ....:: . ::
CCDS75 RADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNPFDDIIPR
120 130 140 150 160 170
CCDS75 EIKRLKKEKPEEEVKKLKPKGTKNFSLLSFGEEAEEEEEEVNRVSQSMKGKSKSSHDLLK
180 190 200 210 220 230
166 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Sat Nov 5 12:28:54 2016 done: Sat Nov 5 12:28:54 2016
Total Scan time: 1.440 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]