FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5406, 357 aa 1>>>pF1KE5406 357 - 357 aa - 357 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9295+/-0.000391; mu= 15.1578+/- 0.024 mean_var=162.1598+/-35.386, 0's: 0 Z-trim(116.8): 463 B-trim: 1124 in 2/53 Lambda= 0.100717 statistics sampled from 27647 (28308) to 27647 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.332), width: 16 Scan time: 6.560 The best scores are: opt bits E(85289) NP_004805 (OMIM: 607797) U5 small nuclear ribonucl ( 357) 2431 365.4 1.1e-100 XP_005246141 (OMIM: 610767,611081) PREDICTED: auto ( 480) 482 82.3 2.4e-15 XP_006712671 (OMIM: 610767,611081) PREDICTED: auto ( 540) 482 82.4 2.6e-15 XP_005246139 (OMIM: 610767,611081) PREDICTED: auto ( 624) 482 82.5 2.8e-15 NP_942593 (OMIM: 610767,611081) autophagy-related ( 444) 476 81.4 4.2e-15 XP_005246143 (OMIM: 610767,611081) PREDICTED: auto ( 463) 476 81.4 4.3e-15 NP_001177196 (OMIM: 610767,611081) autophagy-relat ( 491) 476 81.5 4.5e-15 NP_001177195 (OMIM: 610767,611081) autophagy-relat ( 523) 476 81.5 4.6e-15 NP_060444 (OMIM: 610767,611081) autophagy-related ( 588) 476 81.6 5e-15 NP_110430 (OMIM: 610767,611081) autophagy-related ( 607) 476 81.6 5.1e-15 XP_011531864 (OMIM: 614783,614813) PREDICTED: POC1 ( 300) 447 77.0 6.2e-14 NP_001155052 (OMIM: 614783,614813) POC1 centriolar ( 359) 448 77.2 6.2e-14 NP_056241 (OMIM: 614783,614813) POC1 centriolar pr ( 407) 448 77.3 6.7e-14 XP_011531863 (OMIM: 614783,614813) PREDICTED: POC1 ( 326) 446 76.9 7.2e-14 XP_011531862 (OMIM: 614783,614813) PREDICTED: POC1 ( 374) 446 76.9 7.8e-14 NP_758440 (OMIM: 614784,615973) POC1 centriolar pr ( 478) 435 75.5 2.7e-13 NP_056975 (OMIM: 605585) pre-mRNA-processing facto ( 579) 411 72.1 3.4e-12 NP_001151 (OMIM: 602233) apoptotic protease-activa (1194) 412 72.7 4.8e-12 NP_863658 (OMIM: 602233) apoptotic protease-activa (1205) 412 72.7 4.8e-12 NP_438172 (OMIM: 609012) WD repeat-containing prot ( 334) 404 70.8 5e-12 NP_060058 (OMIM: 609012) WD repeat-containing prot ( 334) 404 70.8 5e-12 XP_005272220 (OMIM: 609012) PREDICTED: WD repeat-c ( 334) 404 70.8 5e-12 XP_016861593 (OMIM: 614783,614813) PREDICTED: POC1 ( 321) 394 69.3 1.3e-11 NP_001155053 (OMIM: 614783,614813) POC1 centriolar ( 369) 394 69.4 1.5e-11 NP_001309196 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 387 68.2 2.5e-11 NP_001309195 (OMIM: 607795,615922) U4/U6 small nuc ( 279) 387 68.2 2.5e-11 NP_001231855 (OMIM: 607795,615922) U4/U6 small nuc ( 521) 387 68.6 3.6e-11 NP_004688 (OMIM: 607795,615922) U4/U6 small nuclea ( 522) 387 68.6 3.6e-11 XP_011531867 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 369 65.5 1.4e-10 XP_011531866 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 369 65.5 1.4e-10 XP_011531865 (OMIM: 614783,614813) PREDICTED: POC1 ( 246) 369 65.5 1.4e-10 NP_008882 (OMIM: 601787) transcription initiation ( 800) 371 66.5 2.3e-10 XP_011535412 (OMIM: 601686) PREDICTED: telomerase (2104) 374 67.5 3.1e-10 NP_001308124 (OMIM: 270710,602342,608628,616944) F ( 427) 364 65.1 3.3e-10 NP_001305964 (OMIM: 601686) telomerase protein com (2519) 374 67.6 3.4e-10 NP_009041 (OMIM: 601686) telomerase protein compon (2627) 374 67.6 3.5e-10 XP_005268084 (OMIM: 601686) PREDICTED: telomerase (2627) 374 67.6 3.5e-10 NP_001308123 (OMIM: 270710,602342,608628,616944) F ( 514) 364 65.2 3.6e-10 XP_011511444 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 NP_078941 (OMIM: 270710,602342,608628,616944) F-bo ( 514) 364 65.2 3.6e-10 XP_006713809 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 XP_005247832 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 XP_011511445 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 XP_011511443 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 XP_016862674 (OMIM: 270710,602342,608628,616944) P ( 514) 364 65.2 3.6e-10 NP_001308122 (OMIM: 270710,602342,608628,616944) F ( 514) 364 65.2 3.6e-10 NP_037361 (OMIM: 602233) apoptotic protease-activa (1237) 368 66.3 4.1e-10 NP_863651 (OMIM: 602233) apoptotic protease-activa (1248) 368 66.3 4.1e-10 NP_001186706 (OMIM: 614784,615973) POC1 centriolar ( 436) 359 64.4 5.5e-10 NP_599021 (OMIM: 400033) F-box-like/WD repeat-cont ( 522) 355 63.9 9.1e-10 >>NP_004805 (OMIM: 607797) U5 small nuclear ribonucleopr (357 aa) initn: 2431 init1: 2431 opt: 2431 Z-score: 1928.4 bits: 365.4 E(85289): 1.1e-100 Smith-Waterman score: 2431; 100.0% identity (100.0% similar) in 357 aa overlap (1-357:1-357) 10 20 30 40 50 60 pF1KE5 MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 IRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 LSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKI 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 AAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEIQ 310 320 330 340 350 >>XP_005246141 (OMIM: 610767,611081) PREDICTED: autophag (480 aa) initn: 383 init1: 131 opt: 482 Z-score: 396.5 bits: 82.3 E(85289): 2.4e-15 Smith-Waterman score: 482; 29.6% identity (63.2% similar) in 334 aa overlap (25-344:146-467) 10 20 30 40 pF1KE5 MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQAT-----PGALLQAGP ::: :. :...... : ... : XP_005 ISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAARRRSVSSFPVPQDNVDTHP 120 130 140 150 160 170 50 60 70 80 90 100 pF1KE5 PRCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATL . ...: . ....:.::: .: :.. ::..:.:: . ::.:.:. :. ..: XP_005 GSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSL 180 190 200 210 220 230 110 120 130 140 150 160 pF1KE5 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ .: .... ..... ::.:..::.: . .: . . . : ::.. : : . . XP_005 SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNAR 240 250 260 270 280 290 170 180 190 200 210 220 pF1KE5 LVCTGSDDGTVKLWDIRKKAAIQT-FQNTYQVLAVTFND---TSDQIISGGIDNDIKVWD .: .:: : :.::::.:.:. :.: : .. . :: : . ..:: .:. :. :: XP_005 IV-SGSHDRTLKLWDLRSKVCIKTVFAGS------SCNDIVCTEQCVMSGHFDKKIRFWD 300 310 320 330 340 230 240 250 260 270 280 pF1KE5 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV .:..... :. ..:.:.:. : . ::: . :. ..: :.: : : . :.. XP_005 IRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPG 350 360 370 380 390 400 290 300 310 320 330 340 pF1KE5 HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEP . .. : .::::: .:::::. .:.:.. . .. : :..::: ::. :. XP_005 FKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGS 410 420 430 440 450 460 350 pF1KE5 IIISASSDKRLYMGEIQ ..: XP_005 HVVSVDKGCKAVLWAQY 470 480 >>XP_006712671 (OMIM: 610767,611081) PREDICTED: autophag (540 aa) initn: 383 init1: 131 opt: 482 Z-score: 395.9 bits: 82.4 E(85289): 2.6e-15 Smith-Waterman score: 482; 29.6% identity (63.2% similar) in 334 aa overlap (25-344:206-527) 10 20 30 40 pF1KE5 MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQAT-----PGALLQAGP ::: :. :...... : ... : XP_006 ISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAARRRSVSSFPVPQDNVDTHP 180 190 200 210 220 230 50 60 70 80 90 100 pF1KE5 PRCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATL . ...: . ....:.::: .: :.. ::..:.:: . ::.:.:. :. ..: XP_006 GSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSL 240 250 260 270 280 290 110 120 130 140 150 160 pF1KE5 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ .: .... ..... ::.:..::.: . .: . . . : ::.. : : . . XP_006 SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNAR 300 310 320 330 340 350 170 180 190 200 210 220 pF1KE5 LVCTGSDDGTVKLWDIRKKAAIQT-FQNTYQVLAVTFND---TSDQIISGGIDNDIKVWD .: .:: : :.::::.:.:. :.: : .. . :: : . ..:: .:. :. :: XP_006 IV-SGSHDRTLKLWDLRSKVCIKTVFAGS------SCNDIVCTEQCVMSGHFDKKIRFWD 360 370 380 390 400 230 240 250 260 270 280 pF1KE5 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV .:..... :. ..:.:.:. : . ::: . :. ..: :.: : : . :.. XP_006 IRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPG 410 420 430 440 450 460 290 300 310 320 330 340 pF1KE5 HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEP . .. : .::::: .:::::. .:.:.. . .. : :..::: ::. :. XP_006 FKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGS 470 480 490 500 510 520 350 pF1KE5 IIISASSDKRLYMGEIQ ..: XP_006 HVVSVDKGCKAVLWAQY 530 540 >>XP_005246139 (OMIM: 610767,611081) PREDICTED: autophag (624 aa) initn: 383 init1: 131 opt: 482 Z-score: 395.2 bits: 82.5 E(85289): 2.8e-15 Smith-Waterman score: 482; 29.6% identity (63.2% similar) in 334 aa overlap (25-344:290-611) 10 20 30 40 pF1KE5 MIEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQAT-----PGALLQAGP ::: :. :...... : ... : XP_005 ISRAATKRLSQPAGGLLDSITNIFGLSESPLLGHHSSSDAARRRSVSSFPVPQDNVDTHP 260 270 280 290 300 310 50 60 70 80 90 100 pF1KE5 PRCSSLQAP---IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATL . ...: . ....:.::: .: :.. ::..:.:: . ::.:.:. :. ..: XP_005 GSGKEVRVPATALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSL 320 330 340 350 360 370 110 120 130 140 150 160 pF1KE5 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQ .: .... ..... ::.:..::.: . .: . . . : ::.. : : . . XP_005 SGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNAR 380 390 400 410 420 430 170 180 190 200 210 220 pF1KE5 LVCTGSDDGTVKLWDIRKKAAIQT-FQNTYQVLAVTFND---TSDQIISGGIDNDIKVWD .: .:: : :.::::.:.:. :.: : .. . :: : . ..:: .:. :. :: XP_005 IV-SGSHDRTLKLWDLRSKVCIKTVFAGS------SCNDIVCTEQCVMSGHFDKKIRFWD 440 450 460 470 480 490 230 240 250 260 270 280 pF1KE5 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNV .:..... :. ..:.:.:. : . ::: . :. ..: :.: : : . :.. XP_005 IRSESIVREME-LLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPG 500 510 520 530 540 290 300 310 320 330 340 pF1KE5 HNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEP . .. : .::::: .:::::. .:.:.. . .. : :..::: ::. :. XP_005 FKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGS 550 560 570 580 590 600 350 pF1KE5 IIISASSDKRLYMGEIQ ..: XP_005 HVVSVDKGCKAVLWAQY 610 620 >>NP_942593 (OMIM: 610767,611081) autophagy-related prot (444 aa) initn: 383 init1: 131 opt: 476 Z-score: 392.1 bits: 81.4 E(85289): 4.2e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:139-431) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . NP_942 ETSPVRAISRAATRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 110 120 130 140 150 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... NP_942 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 160 170 180 190 200 210 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: NP_942 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 220 230 240 250 260 270 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. NP_942 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 280 290 300 310 320 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: NP_942 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 330 340 350 360 370 380 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: NP_942 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 390 400 410 420 430 440 pF1KE5 IQ NP_942 QY >>XP_005246143 (OMIM: 610767,611081) PREDICTED: autophag (463 aa) initn: 383 init1: 131 opt: 476 Z-score: 391.9 bits: 81.4 E(85289): 4.3e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:158-450) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . XP_005 AGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 130 140 150 160 170 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... XP_005 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 180 190 200 210 220 230 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: XP_005 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 240 250 260 270 280 290 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. XP_005 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 300 310 320 330 340 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: XP_005 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 350 360 370 380 390 400 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: XP_005 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 410 420 430 440 450 460 pF1KE5 IQ XP_005 QY >>NP_001177196 (OMIM: 610767,611081) autophagy-related p (491 aa) initn: 383 init1: 131 opt: 476 Z-score: 391.6 bits: 81.5 E(85289): 4.5e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:186-478) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . NP_001 AGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 160 170 180 190 200 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... NP_001 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 210 220 230 240 250 260 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: NP_001 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 270 280 290 300 310 320 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. NP_001 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 330 340 350 360 370 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: NP_001 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 380 390 400 410 420 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: NP_001 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 430 440 450 460 470 480 pF1KE5 IQ NP_001 QY 490 >>NP_001177195 (OMIM: 610767,611081) autophagy-related p (523 aa) initn: 383 init1: 131 opt: 476 Z-score: 391.3 bits: 81.5 E(85289): 4.6e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:218-510) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . NP_001 AGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 190 200 210 220 230 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... NP_001 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 240 250 260 270 280 290 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: NP_001 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 300 310 320 330 340 350 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. NP_001 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 360 370 380 390 400 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: NP_001 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 410 420 430 440 450 460 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: NP_001 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 470 480 490 500 510 520 pF1KE5 IQ NP_001 QY >>NP_060444 (OMIM: 610767,611081) autophagy-related prot (588 aa) initn: 383 init1: 131 opt: 476 Z-score: 390.8 bits: 81.6 E(85289): 5e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:283-575) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . NP_060 ETSPVRAISRAATRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 260 270 280 290 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... NP_060 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 300 310 320 330 340 350 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: NP_060 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 360 370 380 390 400 410 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. NP_060 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 420 430 440 450 460 470 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: NP_060 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 480 490 500 510 520 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: NP_060 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 530 540 550 560 570 580 pF1KE5 IQ NP_060 QY >>NP_110430 (OMIM: 610767,611081) autophagy-related prot (607 aa) initn: 383 init1: 131 opt: 476 Z-score: 390.7 bits: 81.6 E(85289): 5.1e-15 Smith-Waterman score: 480; 30.7% identity (62.7% similar) in 319 aa overlap (32-344:302-594) 10 20 30 40 50 60 pF1KE5 IEQQKRKGPELPLVPVKRQRHELLLGAGSGPGAGQQQATPGALLQAGPPRCSSLQAPIML ::.:.. .:.. : : . NP_110 AGGLLDSITNIFGRRSVSSFPVPQDNVDTHPGSGKEVRVPATAL------C--------V 280 290 300 310 70 80 90 100 110 120 pF1KE5 LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGD-CDNYATLKGHSGAVMELHYNTD ...:.::: .: :.. ::..:.:: . ::.:.:. :. ..:.: .... ..... NP_110 FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGEKCEFKGSLSGSNAGITSIEFDSA 320 330 340 350 360 370 130 140 150 160 170 180 pF1KE5 GSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWD ::.:..::.: . .: . . . : ::.. : : . ..: .:: : :.:::: NP_110 GSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIV-SGSHDRTLKLWD 380 390 400 410 420 430 190 200 210 220 230 pF1KE5 IRKKAAIQTFQNTYQVLA-VTFND---TSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD .:.:. :.: :.: . :: : . ..:: .:. :. ::.:..... :. NP_110 LRSKVCIKT------VFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESIVREME-LLG 440 450 460 470 480 240 250 260 270 280 290 pF1KE5 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD ..:.:.:. : . ::: . :. ..: :.: : : . :.. . .. : .::: NP_110 KITALDLNPERTELLSCSRDDLLKVIDLRTNAIK----QTFSAPGFKCGSDWTRVVFSPD 490 500 510 520 530 540 300 310 320 330 340 350 pF1KE5 GSKIAAGSADRFVYVWDTTSRRILYKLPG-HAGSINEVAFHPDEPIIISASSDKRLYMGE :: .:::::. .:.:.. . .. : :..::: ::. :. ..: NP_110 GSYVAAGSAEGSLYIWSVLTGKVEKVLSKQHSSSINAVAWSPSGSHVVSVDKGCKAVLWA 550 560 570 580 590 600 pF1KE5 IQ NP_110 QY 357 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:25:45 2016 done: Tue Nov 8 00:25:47 2016 Total Scan time: 6.560 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]