FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2155, 378 aa 1>>>pF1KE2155 378 - 378 aa - 378 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2372+/-0.000611; mu= 17.3039+/- 0.038 mean_var=128.9408+/-34.368, 0's: 0 Z-trim(106.6): 637 B-trim: 841 in 1/51 Lambda= 0.112948 statistics sampled from 13865 (14654) to 13865 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.486), E-opt: 0.2 (0.172), width: 16 Scan time: 6.980 The best scores are: opt bits E(85289) NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378) 2460 413.5 4.2e-115 NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113 NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113 NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372) 2416 406.3 5.9e-113 NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315) 2035 344.1 2.6e-94 NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357) 1007 176.7 7.5e-44 NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357) 1007 176.7 7.5e-44 XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369) 1007 176.7 7.7e-44 NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369) 1007 176.7 7.7e-44 NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374) 955 168.2 2.8e-41 NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374) 955 168.2 2.8e-41 NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 841 149.6 1e-35 NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 841 149.6 1e-35 NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360) 836 148.8 1.9e-35 XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360) 836 148.8 1.9e-35 NP_001707 (OMIM: 601613) C-X-C chemokine receptor ( 372) 788 141.0 4.3e-33 NP_001495 (OMIM: 300574) C-X-C chemokine receptor ( 368) 786 140.7 5.3e-33 XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 786 140.7 5.4e-33 NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 786 140.7 5.7e-33 XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 786 140.7 5.7e-33 NP_116743 (OMIM: 601613) C-X-C chemokine receptor ( 327) 780 139.6 9.8e-33 NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374) 779 139.5 1.2e-32 XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360) 772 138.4 2.6e-32 NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360) 772 138.4 2.6e-32 NP_000570 (OMIM: 601373,609532,610379,612522) C-C ( 352) 762 136.7 7.8e-32 NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352) 762 136.7 7.8e-32 NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355) 760 136.4 9.8e-32 NP_001548 (OMIM: 146928) C-X-C chemokine receptor ( 360) 758 136.1 1.2e-31 XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31 XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31 NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360) 758 136.1 1.2e-31 XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31 XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360) 758 136.1 1.2e-31 NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356) 749 134.6 3.4e-31 NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352) 745 134.0 5.3e-31 NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362) 734 132.2 1.9e-30 NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350) 715 129.1 1.6e-29 XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 711 128.4 2.5e-29 NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355) 711 128.4 2.5e-29 NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355) 711 128.4 2.5e-29 XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355) 711 128.4 2.5e-29 NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373) 711 128.5 2.6e-29 NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376) 711 128.5 2.6e-29 XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 711 128.5 2.7e-29 XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410) 711 128.5 2.7e-29 NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355) 689 124.8 3e-28 NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 668 121.5 3.4e-27 NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355) 661 120.3 7.1e-27 NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355) 661 120.3 7.1e-27 NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355) 661 120.3 7.1e-27 >>NP_001829 (OMIM: 600242) C-C chemokine receptor type 7 (378 aa) initn: 2460 init1: 2460 opt: 2460 Z-score: 2187.5 bits: 413.5 E(85289): 4.2e-115 Smith-Waterman score: 2460; 100.0% identity (100.0% similar) in 378 aa overlap (1-378:1-378) 10 20 30 40 50 60 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH 310 320 330 340 350 360 370 pF1KE2 IRRSSMSVEAETTTTFSP :::::::::::::::::: NP_001 IRRSSMSVEAETTTTFSP 370 >>NP_001288646 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113 Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372) 10 20 30 40 50 60 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH 300 310 320 330 340 350 370 pF1KE2 IRRSSMSVEAETTTTFSP :::::::::::::::::: NP_001 IRRSSMSVEAETTTTFSP 360 370 >>NP_001288647 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113 Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372) 10 20 30 40 50 60 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH 300 310 320 330 340 350 370 pF1KE2 IRRSSMSVEAETTTTFSP :::::::::::::::::: NP_001 IRRSSMSVEAETTTTFSP 360 370 >>NP_001288645 (OMIM: 600242) C-C chemokine receptor typ (372 aa) initn: 2416 init1: 2416 opt: 2416 Z-score: 2148.9 bits: 406.3 E(85289): 5.9e-113 Smith-Waterman score: 2416; 100.0% identity (100.0% similar) in 372 aa overlap (7-378:1-372) 10 20 30 40 50 60 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF :::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNTTVDYTLFESLCSKKDVRNFKAWF 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 LPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAK 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCV 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMS 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 FCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCEL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRH 300 310 320 330 340 350 370 pF1KE2 IRRSSMSVEAETTTTFSP :::::::::::::::::: NP_001 IRRSSMSVEAETTTTFSP 360 370 >>NP_001288643 (OMIM: 600242) C-C chemokine receptor typ (315 aa) initn: 2035 init1: 2035 opt: 2035 Z-score: 1814.1 bits: 344.1 E(85289): 2.6e-94 Smith-Waterman score: 2035; 100.0% identity (100.0% similar) in 315 aa overlap (64-378:1-315) 40 50 60 70 80 90 pF1KE2 GDNTTVDYTLFESLCSKKDVRNFKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMT :::::::::::::::::::::::::::::: NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMT 10 20 30 100 110 120 130 140 150 pF1KE2 DTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISID :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DTYLLNLAVADILFLLTLPFWAYSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISID 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE2 RYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RYVAIVQAVSAHRHRARVLLISKLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE2 TEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEHVEAFITIQVAQMVIGFLVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFI 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE2 VFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFQLPYNGVVLAQTVANFNITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKF 220 230 240 250 260 270 340 350 360 370 pF1KE2 RNDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSMSVEAETTTTFSP ::::::::::::::::::::::::::::::::::::::::::::: NP_001 RNDLFKLFKDLGCLSQEQLRQWSSCRHIRRSSMSVEAETTTTFSP 280 290 300 310 >>NP_001243298 (OMIM: 604738) C-C chemokine receptor typ (357 aa) initn: 1007 init1: 603 opt: 1007 Z-score: 908.2 bits: 176.7 E(85289): 7.5e-44 Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:1-352) 10 20 30 40 50 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN ..::: ...:. :.... . : :..::. NP_001 MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ 10 20 30 60 70 80 90 100 110 pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA : . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.:::::: NP_001 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS .:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: : NP_001 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF :. : ::.::..: :::.:::.... :. :... : .. .. . ....:: NP_001 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN ..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. . NP_001 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL . :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: : NP_001 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ- 280 290 300 310 320 330 360 370 pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP : : . :..:... . : : NP_001 --WVSFTR-REGSLKLSSMLLETTSGALSL 340 350 >>NP_006632 (OMIM: 604738) C-C chemokine receptor type 9 (357 aa) initn: 1007 init1: 603 opt: 1007 Z-score: 908.2 bits: 176.7 E(85289): 7.5e-44 Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:1-352) 10 20 30 40 50 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN ..::: ...:. :.... . : :..::. NP_006 MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ 10 20 30 60 70 80 90 100 110 pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA : . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.:::::: NP_006 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA 40 50 60 70 80 90 120 130 140 150 160 170 pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS .:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: : NP_006 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS 100 110 120 130 140 150 180 190 200 210 220 230 pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF :. : ::.::..: :::.:::.... :. :... : .. .. . ....:: NP_006 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF 160 170 180 190 200 210 240 250 260 270 280 290 pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN ..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. . NP_006 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA 220 230 240 250 260 270 300 310 320 330 340 350 pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL . :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: : NP_006 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ- 280 290 300 310 320 330 360 370 pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP : : . :..:... . : : NP_006 --WVSFTR-REGSLKLSSMLLETTSGALSL 340 350 >>XP_011531614 (OMIM: 604738) PREDICTED: C-C chemokine r (369 aa) initn: 1007 init1: 603 opt: 1007 Z-score: 908.1 bits: 176.7 E(85289): 7.7e-44 Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:13-364) 10 20 30 40 50 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN ..::: ...:. :.... . : :..::. XP_011 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ 10 20 30 40 60 70 80 90 100 110 pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA : . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.:::::: XP_011 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS .:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: : XP_011 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF :. : ::.::..: :::.:::.... :. :... : .. .. . ....:: XP_011 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN ..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. . XP_011 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL . :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: : XP_011 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ- 290 300 310 320 330 340 360 370 pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP : : . :..:... . : : XP_011 --WVSFTR-REGSLKLSSMLLETTSGALSL 350 360 >>NP_112477 (OMIM: 604738) C-C chemokine receptor type 9 (369 aa) initn: 1007 init1: 603 opt: 1007 Z-score: 908.1 bits: 176.7 E(85289): 7.7e-44 Smith-Waterman score: 1007; 41.9% identity (74.6% similar) in 358 aa overlap (28-377:13-364) 10 20 30 40 50 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT-----VDYTLFESLCSKKDVRN ..::: ...:. :.... . : :..::. NP_112 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQ 10 20 30 40 60 70 80 90 100 110 pF1KE2 FKAWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWA : . ::: .: .. .:: :::.::.:.: : :.::::: .:::::.::.:::.:::::: NP_112 FASHFLPPLYWLVFIVGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWA 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 YSAAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLIS .:: .: : . .::.. ..:::.:.: .::..:::.:::.::.::. :: : . :: : NP_112 IAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYS 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 KLSCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLI---TEHVEAFITIQVAQMVIGF :. : ::.::..: :::.:::.... :. :... : .. .. . ....:: NP_112 KMVCFTIWVLAAALCIPEILYSQIKEESGIAI--CTMVYPSDESTKLKSAVLTLKVILGF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN ..:...:. :: .::.::.::.. ..::.:: :.:..::.. :.::: ..:.::. . NP_112 FLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYA 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL . :.: .: ...: ..:: ..: . :.:: ::.:.: .:: :: : .:.:::.:: : NP_112 MFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQ- 290 300 310 320 330 340 360 370 pF1KE2 RQWSSCRHIRRSSMSVEAETTTTFSP : : . :..:... . : : NP_112 --WVSFTR-REGSLKLSSMLLETTSGALSL 350 360 >>NP_004358 (OMIM: 601835) C-C chemokine receptor type 6 (374 aa) initn: 539 init1: 317 opt: 955 Z-score: 862.2 bits: 168.2 E(85289): 2.8e-41 Smith-Waterman score: 955; 42.1% identity (73.0% similar) in 366 aa overlap (26-377:13-373) 10 20 30 40 50 pF1KE2 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNTT---VDYTLFESLCSKKDVRNFK : : ... ::. :: .. ::: ..::.:. NP_004 MSGESMNFSDVFDSSEDYFVSVNTSYYSVDSEML--LCSLQEVRQFS 10 20 30 40 60 70 80 90 100 110 pF1KE2 AWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS :.:: ::.:: ::::: :::.:. ..:. ..:::.::::.:.:::::.::::::: : NP_004 RLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVS 50 60 70 80 90 100 120 130 140 150 160 170 pF1KE2 -AAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISK :. .:::. :::. .:: ..: ::::: :::.:::.:::::... : :.:.: :: NP_004 HATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRSRTLPRSK 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE2 LSCVGIWILATVLSIPELLYSDLQRSSSEQAMRC----SLITEHVEAFITIQVAQMVIGF . :. .: :....: .... :. ... . : . ..: .. . . ....:: NP_004 IICLVVWGLSVIISSSTFVFN--QKYNTQGSDVCEPKYQTVSEPIRWKLLMLGLELLFGF 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE2 LVPLLAMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFN ..::. : ::: :..::.::.: .:.:::.::::::.::.. :.:.: :.:. :.::.. NP_004 FIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLV-TAANLG 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE2 ITSSTCELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQL . .:. : .. . :: :: ..::.:: :::::: :::: ..:..::: :. .. NP_004 KMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWCVRRKYK 290 300 310 320 330 340 360 370 pF1KE2 RQWSSC--RHI----RRSSMSVEAETTTTFSP . :: :. :..: ... .....:. NP_004 SSGFSCAGRYSENISRQTSETADNDNASSFTM 350 360 370 378 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 15:46:16 2016 done: Sun Nov 6 15:46:18 2016 Total Scan time: 6.980 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]