FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4503, 528 aa 1>>>pF1KE4503 528 - 528 aa - 528 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.7030+/-0.00103; mu= -9.1851+/- 0.062 mean_var=380.0313+/-78.333, 0's: 0 Z-trim(116.0): 51 B-trim: 8 in 1/50 Lambda= 0.065791 statistics sampled from 16582 (16626) to 16582 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.791), E-opt: 0.2 (0.511), width: 16 Scan time: 4.440 The best scores are: opt bits E(32554) CCDS34389.1 CDSN gene_id:1041|Hs108|chr6 ( 529) 3551 350.8 2.2e-96 >>CCDS34389.1 CDSN gene_id:1041|Hs108|chr6 (529 aa) initn: 2649 init1: 2649 opt: 3551 Z-score: 1843.9 bits: 350.8 E(32554): 2.2e-96 Smith-Waterman score: 3551; 99.2% identity (99.8% similar) in 529 aa overlap (1-528:1-529) 10 20 30 40 50 60 pF1KE4 MGSSRAPWMGRVGGHGMLALLLAGLLLPGTLAKSIGTFSDPCKDPTRITSPNDPCLTGKG :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: CCDS34 MGSSRAPWMGRVGGHGMMALLLAGLLLPGTLAKSIGTFSDPCKDPTRITSPNDPCLTGKG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 DSSGFSSYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQVSYSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 DSSGFSSYSGSSSSGSSISSARSSGGGSSGSSSGSSIAQGGSAGSFKPGTGYSQVSYSSG 70 80 90 100 110 120 130 140 150 160 170 pF1KE4 SGSSLQGASGSSQLGSSSSHSGSSGSHSGSSS-HSSSSSSFQFSSSSFQVGNGSALPTND ::::::::::::::::::::::.::::::::: ::::::::::::::::::::::::::: CCDS34 SGSSLQGASGSSQLGSSSSHSGNSGSHSGSSSSHSSSSSSFQFSSSSFQVGNGSALPTND 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 NSYRGILNPSQPGQSSSSSQTFGVSSSGQSVSSNQRPCSSDIPDSPCSGGPIVSHSGPYI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NSYRGILNPSQPGQSSSSSQTFGVSSSGQSVSSNQRPCSSDIPDSPCSGGPIVSHSGPYI 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 PSSHSVSGGQRPVVVVVDQHGSGAPGVVQGPPCSNGGLPGKPCPPITSVDKSYGGYEVVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 PSSHSVSGGQRPVVVVVDQHGSGAPGVVQGPPCSNGGLPGKPCPPITSVDKSYGGYEVVG 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 GSSDSYLVPGMTYSKGKIYPVGYFTKENPVKGSPGVPSFAAGPPISEGKYFSSNPIIPSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 GSSDSYLVPGMTYSKGKIYPVGYFTKENPVKGSPGVPSFAAGPPISEGKYFSSNPIIPSQ 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 SAASSAIAFQPVGTGGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSGLPYHPCGSASQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SAASSAIAFQPVGTGGVQLCGGGSTGSKGPCSPSSSRVPSSSSISSSSGLPYHPCGSASQ 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 SPCSPPGTGSFSSSSSSQSSGKIILQPCGSKSSSSGHPCMSVSSLTLTGGPDGSPHPDPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SPCSPPGTGSFSSSSSSQSSGKIILQPCGSKSSSSGHPCMSVSSLTLTGGPDGSPHPDPS 430 440 450 460 470 480 480 490 500 510 520 pF1KE4 AGAKPCGSSSAGKIPCRSIRDILAQVKPLGPQLADPEVFLPQGELLDSP ::::::::::::::::::::::::::::::::::::::::::::::.:: CCDS34 AGAKPCGSSSAGKIPCRSIRDILAQVKPLGPQLADPEVFLPQGELLNSP 490 500 510 520 528 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:24:40 2016 done: Sun Nov 6 00:24:41 2016 Total Scan time: 4.440 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]