Result of FASTA (omim) for
pFN21AE1428
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1428, 310 aa
1>>>pF1KE1428 310 - 310 aa - 310 aa
Library: /omim/omim.rfq.tfa
60827320 residues in 85289 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.8411+/-0.000346; mu= 14.2761+/- 0.022
mean_var=118.0254+/-23.976, 0's: 0 Z-trim(117.7): 173 B-trim: 36 in 2/56
Lambda= 0.118056
statistics sampled from 29751 (29966) to 29751 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.722), E-opt: 0.2 (0.351), width: 16
Scan time: 7.720
The best scores are: opt bits E(85289)
NP_003992 (OMIM: 152700,604590,611162) low affinit ( 310) 2122 372.2 7.6e-103
XP_016856160 (OMIM: 152700,604590,611162) PREDICTE ( 310) 2122 372.2 7.6e-103
NP_001002275 (OMIM: 152700,604590,611162) low affi ( 309) 2105 369.3 5.6e-102
NP_001177757 (OMIM: 152700,604590,611162) low affi ( 303) 2050 359.9 3.7e-99
XP_016856158 (OMIM: 152700,604590,611162) PREDICTE ( 324) 1867 328.8 9.3e-90
XP_016856159 (OMIM: 152700,604590,611162) PREDICTE ( 323) 1850 325.9 6.9e-89
NP_001002274 (OMIM: 152700,604590,611162) low affi ( 291) 1752 309.1 6.8e-84
XP_016856161 (OMIM: 152700,604590,611162) PREDICTE ( 291) 1752 309.1 6.8e-84
NP_001002273 (OMIM: 152700,604590,611162) low affi ( 290) 1735 306.2 5e-83
NP_963857 (OMIM: 188030,612169) low affinity immun ( 323) 1723 304.2 2.2e-82
XP_011507594 (OMIM: 152700,604590,611162) PREDICTE ( 234) 1511 268.0 1.3e-71
XP_011507593 (OMIM: 146790,152700,611162) PREDICTE ( 261) 1333 237.7 1.9e-62
NP_067674 (OMIM: 146790,152700,611162) low affinit ( 316) 1329 237.1 3.5e-62
XP_016856152 (OMIM: 146790,152700,611162) PREDICTE ( 368) 1329 237.2 3.9e-62
XP_011507592 (OMIM: 146790,152700,611162) PREDICTE ( 317) 1327 236.8 4.4e-62
NP_001129691 (OMIM: 146790,152700,611162) low affi ( 317) 1327 236.8 4.4e-62
XP_016856153 (OMIM: 146790,152700,611162) PREDICTE ( 353) 1327 236.8 4.8e-62
XP_016856154 (OMIM: 146790,152700,611162) PREDICTE ( 353) 1327 236.8 4.8e-62
XP_011507589 (OMIM: 146790,152700,611162) PREDICTE ( 369) 1327 236.8 4.9e-62
XP_016856157 (OMIM: 146790,152700,611162) PREDICTE ( 275) 1161 208.4 1.3e-53
XP_016856156 (OMIM: 146790,152700,611162) PREDICTE ( 276) 1159 208.1 1.7e-53
XP_016856155 (OMIM: 146790,152700,611162) PREDICTE ( 328) 1159 208.2 1.9e-53
NP_001257964 (OMIM: 610665) low affinity immunoglo ( 268) 610 114.6 2.3e-25
NP_000561 (OMIM: 610665) low affinity immunoglobul ( 233) 607 114.0 2.9e-25
NP_001231682 (OMIM: 610665) low affinity immunoglo ( 269) 607 114.1 3.3e-25
NP_001121068 (OMIM: 146740,615707) low affinity im ( 253) 592 111.5 1.8e-24
NP_001121064 (OMIM: 146740,615707) low affinity im ( 358) 592 111.6 2.3e-24
NP_001316049 (OMIM: 146740,615707) low affinity im ( 254) 589 111.0 2.6e-24
NP_001121065 (OMIM: 146740,615707) low affinity im ( 254) 589 111.0 2.6e-24
NP_001121067 (OMIM: 146740,615707) low affinity im ( 254) 589 111.0 2.6e-24
NP_000560 (OMIM: 146740,615707) low affinity immun ( 359) 589 111.1 3.3e-24
NP_001257965 (OMIM: 610665) low affinity immunoglo ( 216) 585 110.2 3.8e-24
XP_005245014 (OMIM: 146760) PREDICTED: high affini ( 375) 574 108.6 2e-23
NP_000557 (OMIM: 146760) high affinity immunoglobu ( 374) 565 107.1 5.8e-23
XP_016856150 (OMIM: 601502) PREDICTED: high affini ( 281) 555 105.2 1.6e-22
NP_001231839 (OMIM: 601502) high affinity immunogl ( 224) 549 104.1 2.7e-22
NP_001017986 (OMIM: 601502) high affinity immunogl ( 280) 547 103.9 4e-22
NP_001992 (OMIM: 147140) high affinity immunoglobu ( 257) 490 94.1 3.1e-19
NP_001275758 (OMIM: 609251) Fc receptor-like B iso ( 318) 434 84.7 2.7e-16
NP_001002901 (OMIM: 609251) Fc receptor-like B iso ( 426) 434 84.8 3.3e-16
NP_001307170 (OMIM: 609251) Fc receptor-like B iso ( 426) 434 84.8 3.3e-16
NP_001275760 (OMIM: 609251) Fc receptor-like B iso ( 275) 429 83.8 4.4e-16
NP_001275759 (OMIM: 609251) Fc receptor-like B iso ( 311) 399 78.7 1.7e-14
NP_001275761 (OMIM: 609251) Fc receptor-like B iso ( 268) 394 77.8 2.7e-14
XP_011508335 (OMIM: 605877) PREDICTED: Fc receptor ( 844) 398 79.0 3.7e-14
XP_011508334 (OMIM: 605877) PREDICTED: Fc receptor ( 884) 398 79.0 3.8e-14
XP_011508333 (OMIM: 605877) PREDICTED: Fc receptor ( 884) 398 79.0 3.8e-14
NP_112571 (OMIM: 605877) Fc receptor-like protein ( 977) 398 79.1 4.1e-14
NP_001182317 (OMIM: 605877) Fc receptor-like prote ( 998) 398 79.1 4.2e-14
NP_112572 (OMIM: 605876) Fc receptor-like protein ( 515) 365 73.1 1.3e-12
>>NP_003992 (OMIM: 152700,604590,611162) low affinity im (310 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1967.4 bits: 372.2 E(85289): 7.6e-103
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_003 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280 290 300
310
pF1KE1 LEEPDDQNRI
::::::::::
NP_003 LEEPDDQNRI
310
>>XP_016856160 (OMIM: 152700,604590,611162) PREDICTED: l (310 aa)
initn: 2122 init1: 2122 opt: 2122 Z-score: 1967.4 bits: 372.2 E(85289): 7.6e-103
Smith-Waterman score: 2122; 100.0% identity (100.0% similar) in 310 aa overlap (1-310:1-310)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280 290 300
310
pF1KE1 LEEPDDQNRI
::::::::::
XP_016 LEEPDDQNRI
310
>>NP_001002275 (OMIM: 152700,604590,611162) low affinity (309 aa)
initn: 1800 init1: 1800 opt: 2105 Z-score: 1951.8 bits: 369.3 E(85289): 5.6e-102
Smith-Waterman score: 2105; 99.7% identity (99.7% similar) in 310 aa overlap (1-310:1-309)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
NP_001 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPA-PPKAVLKLEPQWIN
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
240 250 260 270 280 290
310
pF1KE1 LEEPDDQNRI
::::::::::
NP_001 LEEPDDQNRI
300
>>NP_001177757 (OMIM: 152700,604590,611162) low affinity (303 aa)
initn: 1805 init1: 1805 opt: 2050 Z-score: 1901.3 bits: 359.9 E(85289): 3.7e-99
Smith-Waterman score: 2050; 97.7% identity (97.7% similar) in 310 aa overlap (1-310:1-303)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
:::::::::::::::::::::::::::::::::::::: :::::::::::::::
NP_001 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLA-------APPKAVLKLEPQWIN
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
240 250 260 270 280 290
310
pF1KE1 LEEPDDQNRI
::::::::::
NP_001 LEEPDDQNRI
300
>>XP_016856158 (OMIM: 152700,604590,611162) PREDICTED: l (324 aa)
initn: 1867 init1: 1867 opt: 1867 Z-score: 1732.5 bits: 328.8 E(85289): 9.3e-90
Smith-Waterman score: 1867; 100.0% identity (100.0% similar) in 272 aa overlap (1-272:1-272)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::
XP_016 VVALIYCRKKRISALPGYPECREMGETLPEKPGEYRLSQGFSDGSPGLPAGLEPGRRGLC
250 260 270 280 290 300
310
pF1KE1 LEEPDDQNRI
XP_016 KFSWEPGREQQWEDGWGSNRLVSS
310 320
>>XP_016856159 (OMIM: 152700,604590,611162) PREDICTED: l (323 aa)
initn: 1545 init1: 1545 opt: 1850 Z-score: 1716.8 bits: 325.9 E(85289): 6.9e-89
Smith-Waterman score: 1850; 99.6% identity (99.6% similar) in 272 aa overlap (1-272:1-271)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
XP_016 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPA-PPKAVLKLEPQWIN
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::::::::::::::::::::
XP_016 VVALIYCRKKRISALPGYPECREMGETLPEKPGEYRLSQGFSDGSPGLPAGLEPGRRGLC
240 250 260 270 280 290
310
pF1KE1 LEEPDDQNRI
XP_016 KFSWEPGREQQWEDGWGSNRLVSS
300 310 320
>>NP_001002274 (OMIM: 152700,604590,611162) low affinity (291 aa)
initn: 1793 init1: 1745 opt: 1752 Z-score: 1627.2 bits: 309.1 E(85289): 6.8e-84
Smith-Waterman score: 1933; 93.9% identity (93.9% similar) in 310 aa overlap (1-310:1-291)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
:::::::::::::: :::::::::::::::::::::::::::
NP_001 VVALIYCRKKRISA-------------------NPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280
310
pF1KE1 LEEPDDQNRI
::::::::::
NP_001 LEEPDDQNRI
290
>>XP_016856161 (OMIM: 152700,604590,611162) PREDICTED: l (291 aa)
initn: 1793 init1: 1745 opt: 1752 Z-score: 1627.2 bits: 309.1 E(85289): 6.8e-84
Smith-Waterman score: 1933; 93.9% identity (93.9% similar) in 310 aa overlap (1-310:1-291)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
:::::::::::::: :::::::::::::::::::::::::::
XP_016 VVALIYCRKKRISA-------------------NPTNPDEADKVGAENTITYSLLMHPDA
250 260 270 280
310
pF1KE1 LEEPDDQNRI
::::::::::
XP_016 LEEPDDQNRI
290
>>NP_001002273 (OMIM: 152700,604590,611162) low affinity (290 aa)
initn: 1788 init1: 1423 opt: 1735 Z-score: 1611.6 bits: 306.2 E(85289): 5e-83
Smith-Waterman score: 1916; 93.5% identity (93.5% similar) in 310 aa overlap (1-310:1-290)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::::
NP_001 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPA-PPKAVLKLEPQWIN
10 20 30 40 50
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
60 70 80 90 100 110
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
120 130 140 150 160 170
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
180 190 200 210 220 230
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
:::::::::::::: :::::::::::::::::::::::::::
NP_001 VVALIYCRKKRISA-------------------NPTNPDEADKVGAENTITYSLLMHPDA
240 250 260 270 280
310
pF1KE1 LEEPDDQNRI
::::::::::
NP_001 LEEPDDQNRI
290
>>NP_963857 (OMIM: 188030,612169) low affinity immunoglo (323 aa)
initn: 1747 init1: 1723 opt: 1723 Z-score: 1599.9 bits: 304.2 E(85289): 2.2e-82
Smith-Waterman score: 1723; 99.6% identity (99.6% similar) in 254 aa overlap (1-254:1-254)
10 20 30 40 50 60
pF1KE1 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 MGILSFLPVLATESDWADCKSPQPWGHMLLWTAVLFLAPVAGTPAAPPKAVLKLEPQWIN
10 20 30 40 50 60
70 80 90 100 110 120
pF1KE1 VLQEDSVTLTCRGTHSPESDSIQWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
:::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::
NP_963 VLQEDSVTLTCRGTHSPESDSIPWFHNGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSL
70 80 90 100 110 120
130 140 150 160 170 180
pF1KE1 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 SDPVHLTVLSEWLVLQTPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPN
130 140 150 160 170 180
190 200 210 220 230 240
pF1KE1 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_963 FSIPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQAPSSSPMGIIVAVVTGIAVAAIVAA
190 200 210 220 230 240
250 260 270 280 290 300
pF1KE1 VVALIYCRKKRISALPGYPECREMGETLPEKPANPTNPDEADKVGAENTITYSLLMHPDA
::::::::::::::
NP_963 VVALIYCRKKRISANSTDPVKAAQFEPPGRQMIAIRKRQPEETNNDYETADGGYMTLNPR
250 260 270 280 290 300
310 residues in 1 query sequences
60827320 residues in 85289 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 00:07:26 2016 done: Mon Nov 7 00:07:27 2016
Total Scan time: 7.720 Total Display time: 0.020
Function used was FASTA [36.3.4 Apr, 2011]