FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3948, 359 aa 1>>>pF1KE3948 359 - 359 aa - 359 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2389+/-0.000301; mu= 18.2816+/- 0.019 mean_var=77.7666+/-15.869, 0's: 0 Z-trim(118.4): 42 B-trim: 1358 in 1/53 Lambda= 0.145438 statistics sampled from 31339 (31387) to 31339 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.725), E-opt: 0.2 (0.368), width: 16 Scan time: 8.700 The best scores are: opt bits E(85289) NP_000277 (OMIM: 266510,601758,614859) peroxisome ( 359) 2414 515.5 7.5e-146 >>NP_000277 (OMIM: 266510,601758,614859) peroxisome asse (359 aa) initn: 2414 init1: 2414 opt: 2414 Z-score: 2739.5 bits: 515.5 E(85289): 7.5e-146 Smith-Waterman score: 2414; 100.0% identity (100.0% similar) in 359 aa overlap (1-359:1-359) 10 20 30 40 50 60 pF1KE3 MAEHGAHFTAASVADDQPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 MAEHGAHFTAASVADDQPSIFEVVAQDSLMTAVRPALQHVVKVLAESNPTHYGFLWRWFD 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EIFTLLDLLLQQHYLSRTSASFSENFYGLKRIVMGDTHKSQRLASAGLPKQQLWKSIMFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 EIFTLLDLLLQQHYLSRTSASFSENFYGLKRIVMGDTHKSQRLASAGLPKQQLWKSIMFL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VLLPYLKVKLEKLVSSLREEDEYSIHPPSSRWKRFYRAFLAAYPFVNMAWEGWFLVQQLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 VLLPYLKVKLEKLVSSLREEDEYSIHPPSSRWKRFYRAFLAAYPFVNMAWEGWFLVQQLR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 YILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPAKASMMQQPARSVSEKINSALKKAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 YILGKAQHHSPLLRLAGVQLGRLTVQDIQALEHKPAKASMMQQPARSVSEKINSALKKAV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 GGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYNSDSPLLPKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 GGVALSLSTGLSVGVFFLQFLDWWYSSENQETIKSLTALPTPPPPVHLDYNSDSPLLPKM 250 260 270 280 290 300 310 320 330 340 350 pF1KE3 KTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHLIKLYSPEN ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_000 KTVCPLCRKTRVNDTVLATSGYVFCYRCVFHYVRSHQACPITGYPTEVQHLIKLYSPEN 310 320 330 340 350 359 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:40:42 2016 done: Sun Nov 6 08:40:43 2016 Total Scan time: 8.700 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]