FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6431, 460 aa 1>>>pF1KE6431 460 - 460 aa - 460 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.9238+/-0.000905; mu= 15.7937+/- 0.054 mean_var=85.3743+/-17.045, 0's: 0 Z-trim(107.4): 20 B-trim: 4 in 1/52 Lambda= 0.138807 statistics sampled from 9547 (9555) to 9547 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.294), width: 16 Scan time: 2.730 The best scores are: opt bits E(32554) CCDS4310.1 DCTN4 gene_id:51164|Hs108|chr5 ( 460) 3095 629.6 2e-180 CCDS47310.1 DCTN4 gene_id:51164|Hs108|chr5 ( 467) 3071 624.8 5.6e-179 CCDS47311.1 DCTN4 gene_id:51164|Hs108|chr5 ( 403) 2701 550.7 1e-156 >>CCDS4310.1 DCTN4 gene_id:51164|Hs108|chr5 (460 aa) initn: 3095 init1: 3095 opt: 3095 Z-score: 3352.8 bits: 629.6 E(32554): 2e-180 Smith-Waterman score: 3095; 99.8% identity (99.8% similar) in 460 aa overlap (1-460:1-460) 10 20 30 40 50 60 pF1KE6 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLTDDPAKTTMKKAYYLACGFCRWTSRD :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: CCDS43 AEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KYGLGTRLQRPRAGASISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KYGLGTRLQRPRAGASISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLT 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 EVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 VAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDINSTAKVVV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 PPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEGEVTVCFK 370 380 390 400 410 420 430 440 450 460 pF1KE6 MKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP :::::::::::::::::::::::::::::::::::::::: CCDS43 MKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP 430 440 450 460 >>CCDS47310.1 DCTN4 gene_id:51164|Hs108|chr5 (467 aa) initn: 3081 init1: 1860 opt: 3071 Z-score: 3326.7 bits: 624.8 E(32554): 5.6e-179 Smith-Waterman score: 3071; 98.3% identity (98.3% similar) in 467 aa overlap (1-460:1-467) 10 20 30 40 50 60 pF1KE6 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MASLLQSDRVLYLVQGEKKVRAPLSQLYFCRYCSELRSLECVSHEVDSHYCPSCLENMPS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLTDDPAKTTMKKAYYLACGFCRWTSRD :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: CCDS47 AEAKLKKNRCANCFDCPGCMHTLSTRATSISTQLPDDPAKTTMKKAYYLACGFCRWTSRD 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 VGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFS- ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 VGMADKSVASGGWQEPENPHTQRMNKLIEYYQQLAQKEKVERDRKKLARRRNYMPLAFSQ 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 ------DKYGLGTRLQRPRAGASISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYY :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 HTIHVVDKYGLGTRLQRPRAGASISTLAGLSLKEGEDQKEIKIEPAQAVDEVEPLPEDYY 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 TRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHKHLLIKRSLRCRKCEHNLSKPEFNPTS 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE6 IKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 IKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLLTLTNPVENLTHVTLFECEEGDPDDIN 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE6 STAKVVVPPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 STAKVVVPPKELVLAGKDAAAEYDELAEPQDFQDDPDIIAFRKANKVGIFIKVTPQREEG 370 380 390 400 410 420 420 430 440 450 460 pF1KE6 EVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP ::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWLTQHVELSLGPLLP 430 440 450 460 >>CCDS47311.1 DCTN4 gene_id:51164|Hs108|chr5 (403 aa) initn: 2701 init1: 2701 opt: 2701 Z-score: 2927.2 bits: 550.7 E(32554): 1e-156 Smith-Waterman score: 2701; 99.8% identity (99.8% similar) in 403 aa overlap (58-460:1-403) 30 40 50 60 70 80 pF1KE6 YFCRYCSELRSLECVSHEVDSHYCPSCLENMPSAEAKLKKNRCANCFDCPGCMHTLSTRA :::::::::::::::::::::::::::::: CCDS47 MPSAEAKLKKNRCANCFDCPGCMHTLSTRA 10 20 30 90 100 110 120 130 140 pF1KE6 TSISTQLTDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKL ::::::: :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TSISTQLPDDPAKTTMKKAYYLACGFCRWTSRDVGMADKSVASGGWQEPENPHTQRMNKL 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE6 IEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLGTRLQRPRAGASISTLAGLSLKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 IEYYQQLAQKEKVERDRKKLARRRNYMPLAFSDKYGLGTRLQRPRAGASISTLAGLSLKE 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE6 GEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 GEDQKEIKIEPAQAVDEVEPLPEDYYTRPVNLTEVTTLQQRLLQPDFQPVCASQLYPRHK 160 170 180 190 200 210 270 280 290 300 310 320 pF1KE6 HLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 HLLIKRSLRCRKCEHNLSKPEFNPTSIKFKIQLVAVNYIPEVRIMSIPNLRYMKESQVLL 220 230 240 250 260 270 330 340 350 360 370 380 pF1KE6 TLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDELAEPQDFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TLTNPVENLTHVTLFECEEGDPDDINSTAKVVVPPKELVLAGKDAAAEYDELAEPQDFQD 280 290 300 310 320 330 390 400 410 420 430 440 pF1KE6 DPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 DPDIIAFRKANKVGIFIKVTPQREEGEVTVCFKMKHDFKNLAAPIRPIEESDQGTEVIWL 340 350 360 370 380 390 450 460 pF1KE6 TQHVELSLGPLLP ::::::::::::: CCDS47 TQHVELSLGPLLP 400 460 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:14:15 2016 done: Tue Nov 8 13:14:15 2016 Total Scan time: 2.730 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]