Result of FASTA (omim) for pFN21AB7504
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7504, 238 aa
  1>>>pF1KB7504 238 - 238 aa - 238 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.6176+/-0.000291; mu= 5.9924+/- 0.018
 mean_var=196.8198+/-40.646, 0's: 0 Z-trim(123.6): 151  B-trim: 0 in 0/59
 Lambda= 0.091420
 statistics sampled from 43685 (43843) to 43685 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.812), E-opt: 0.2 (0.514), width:  16
 Scan time:  7.770

The best scores are:                                      opt bits E(85289)
NP_059991 (OMIM: 607150) protein FEV [Homo sapiens ( 238) 1659 230.1 2.6e-60
NP_001257941 (OMIM: 193067) Friend leukemia integr ( 259)  623 93.5 3.8e-19
NP_001257939 (OMIM: 193067) Friend leukemia integr ( 386)  623 93.7   5e-19
XP_011541004 (OMIM: 193067) PREDICTED: Friend leuk ( 410)  623 93.7 5.2e-19
XP_011541003 (OMIM: 193067) PREDICTED: Friend leuk ( 419)  623 93.7 5.3e-19
XP_016872894 (OMIM: 193067) PREDICTED: Friend leuk ( 419)  623 93.7 5.3e-19
NP_001161153 (OMIM: 193067) Friend leukemia integr ( 419)  623 93.7 5.3e-19
XP_016872895 (OMIM: 193067) PREDICTED: Friend leuk ( 419)  623 93.7 5.3e-19
NP_002008 (OMIM: 193067) Friend leukemia integrati ( 452)  623 93.7 5.5e-19
NP_001230358 (OMIM: 165080) transcriptional regula ( 363)  611 92.1 1.4e-18
NP_001129627 (OMIM: 165080) transcriptional regula ( 387)  611 92.1 1.5e-18
XP_016883778 (OMIM: 165080) PREDICTED: transcripti ( 428)  611 92.1 1.6e-18
XP_011527788 (OMIM: 165080) PREDICTED: transcripti ( 435)  611 92.1 1.6e-18
NP_001317954 (OMIM: 165080) transcriptional regula ( 455)  611 92.2 1.7e-18
XP_016883776 (OMIM: 165080) PREDICTED: transcripti ( 459)  611 92.2 1.7e-18
NP_004440 (OMIM: 165080) transcriptional regulator ( 462)  611 92.2 1.7e-18
NP_891548 (OMIM: 165080) transcriptional regulator ( 479)  611 92.2 1.7e-18
NP_001129626 (OMIM: 165080) transcriptional regula ( 486)  611 92.2 1.7e-18
NP_001230357 (OMIM: 165080) transcriptional regula ( 486)  611 92.2 1.7e-18
NP_006485 (OMIM: 600775,611888) ETS domain-contain ( 548)  449 70.9 5.1e-12
NP_001155894 (OMIM: 164720) protein C-ets-1 isofor ( 225)  438 69.0 7.5e-12
NP_001317380 (OMIM: 164720) protein C-ets-1 isofor ( 354)  438 69.2   1e-11
XP_016872806 (OMIM: 164720) PREDICTED: protein C-e ( 398)  438 69.3 1.1e-11
XP_016872805 (OMIM: 164720) PREDICTED: protein C-e ( 418)  438 69.3 1.2e-11
XP_011540953 (OMIM: 164720) PREDICTED: protein C-e ( 432)  438 69.3 1.2e-11
NP_005229 (OMIM: 164720) protein C-ets-1 isoform 2 ( 441)  438 69.3 1.2e-11
XP_016872804 (OMIM: 164720) PREDICTED: protein C-e ( 450)  438 69.3 1.2e-11
XP_011540952 (OMIM: 164720) PREDICTED: protein C-e ( 475)  438 69.4 1.3e-11
NP_001137292 (OMIM: 164720) protein C-ets-1 isofor ( 485)  438 69.4 1.3e-11
XP_016872803 (OMIM: 164720) PREDICTED: protein C-e ( 485)  438 69.4 1.3e-11
XP_011540951 (OMIM: 164720) PREDICTED: protein C-e ( 519)  438 69.4 1.3e-11
XP_005260992 (OMIM: 164740) PREDICTED: protein C-e ( 469)  437 69.2 1.4e-11
NP_005230 (OMIM: 164740) protein C-ets-2 isoform 1 ( 469)  437 69.2 1.4e-11
XP_016883779 (OMIM: 164740) PREDICTED: protein C-e ( 469)  437 69.2 1.4e-11
NP_001243224 (OMIM: 164740) protein C-ets-2 isofor ( 609)  437 69.3 1.7e-11
NP_005231 (OMIM: 164873) ETS translocation variant ( 143)  398 63.6 2.1e-10
XP_005260995 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  406 65.1 2.3e-10
XP_011527823 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  406 65.1 2.3e-10
XP_011527822 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  406 65.1 2.3e-10
NP_002031 (OMIM: 600609) GA-binding protein alpha  ( 454)  406 65.1 2.3e-10
XP_016883802 (OMIM: 600609) PREDICTED: GA-binding  ( 454)  406 65.1 2.3e-10
NP_001184226 (OMIM: 600609) GA-binding protein alp ( 454)  406 65.1 2.3e-10
XP_006711273 (OMIM: 164873) PREDICTED: ETS translo ( 512)  398 64.1 5.2e-10
NP_001138784 (OMIM: 164873) ETS translocation vari ( 512)  398 64.1 5.2e-10
XP_016884828 (OMIM: 311040) PREDICTED: ETS domain- ( 428)  395 63.6   6e-10
NP_005220 (OMIM: 311040) ETS domain-containing pro ( 428)  395 63.6   6e-10
NP_001107595 (OMIM: 311040) ETS domain-containing  ( 428)  395 63.6   6e-10
NP_001291478 (OMIM: 609358) ETS translocation vari ( 155)  378 61.0 1.4e-09
NP_004445 (OMIM: 601600) ETS translocation variant ( 510)  385 62.4 1.7e-09
NP_001156624 (OMIM: 600541) ETS translocation vari ( 374)  382 61.9 1.8e-09


>>NP_059991 (OMIM: 607150) protein FEV [Homo sapiens]     (238 aa)
 initn: 1659 init1: 1659 opt: 1659  Z-score: 1203.7  bits: 230.1 E(85289): 2.6e-60
Smith-Waterman score: 1659; 100.0% identity (100.0% similar) in 238 aa overlap (1-238:1-238)

               10        20        30        40        50        60
pF1KB7 MRQSGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQKGSGQIQLWQFLLELLADR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MRQSGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQKGSGQIQLWQFLLELLADR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 ANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 ANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 RYAYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGLSKLNL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 RYAYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGLSKLNL
              130       140       150       160       170       180

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_059 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
              190       200       210       220       230        

>>NP_001257941 (OMIM: 193067) Friend leukemia integratio  (259 aa)
 initn: 665 init1: 605 opt: 623  Z-score: 464.8  bits: 93.5 E(85289): 3.8e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:74-259)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
            50        60        70        80        90       100   

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
           110       120       130       140       150       160   

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
           170       180                       190       200       

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
       210       220        230       240       250              

>>NP_001257939 (OMIM: 193067) Friend leukemia integratio  (386 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.7  bits: 93.7 E(85289): 5e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:201-386)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
              180       190       200       210       220       230

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
              240       250       260       270       280       290

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
              300                       310       320       330    

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
          340       350        360       370           380       

>>XP_011541004 (OMIM: 193067) PREDICTED: Friend leukemia  (410 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.3  bits: 93.7 E(85289): 5.2e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:225-410)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
XP_011 RESSLLAYNTTSHTDQSSRLSVKEDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
          200       210       220       230       240       250    

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_011 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
          260       270       280       290       300       310    

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
XP_011 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
          320       330                       340       350        

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
XP_011 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
      360       370        380       390       400           410 

>>XP_011541003 (OMIM: 193067) PREDICTED: Friend leukemia  (419 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.2  bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
XP_011 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
           210       220       230       240       250       260   

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_011 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
           270       280       290       300       310       320   

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
XP_011 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
           330       340                       350       360       

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
XP_011 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
       370       380        390       400       410              

>>XP_016872894 (OMIM: 193067) PREDICTED: Friend leukemia  (419 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.2  bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
XP_016 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
           210       220       230       240       250       260   

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_016 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
           270       280       290       300       310       320   

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
XP_016 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
           330       340                       350       360       

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
XP_016 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
       370       380        390       400       410              

>>NP_001161153 (OMIM: 193067) Friend leukemia integratio  (419 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.2  bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
NP_001 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
           210       220       230       240       250       260   

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
           270       280       290       300       310       320   

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
NP_001 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
           330       340                       350       360       

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
NP_001 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
       370       380        390       400       410              

>>XP_016872895 (OMIM: 193067) PREDICTED: Friend leukemia  (419 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 462.2  bits: 93.7 E(85289): 5.3e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:234-419)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
XP_016 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
           210       220       230       240       250       260   

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
XP_016 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
           270       280       290       300       310       320   

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
XP_016 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
           330       340                       350       360       

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
XP_016 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
       370       380        390       400       410              

>>NP_002008 (OMIM: 193067) Friend leukemia integration 1  (452 aa)
 initn: 629 init1: 605 opt: 623  Z-score: 461.8  bits: 93.7 E(85289): 5.5e-19
Smith-Waterman score: 654; 51.2% identity (71.0% similar) in 207 aa overlap (34-237:267-452)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: ::
NP_002 GLNKSPPLGGAQTISKNTEQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSAN
        240       250       260       270       280       290      

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       :.::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_002 ASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
        300       310       320       330       340       350      

            130       140       150       160       170         180
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLP--FPGLSKLNL
       ::.:::.:.::: :: :.                ....:: :. .. .:      .:.:.
NP_002 AYKFDFHGIAQALQPHPT----------------ESSMYKYPSDISYMPSYHAHQQKVNF
        360       370                       380       390       400

              190       200       210       220       230        
pF1KB7 MAASAGVAPAGFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGHYH
       .    .  :.  : . : . .   .. :...::.:..   :.      . ::::..: 
NP_002 VPPHPSSMPVTSSSFFG-AASQYWTSPTGGIYPNPNVPRHPNTH----VPSHLGSYY 
              410        420       430       440           450   

>>NP_001230358 (OMIM: 165080) transcriptional regulator   (363 aa)
 initn: 637 init1: 596 opt: 611  Z-score: 454.4  bits: 92.1 E(85289): 1.4e-18
Smith-Waterman score: 640; 51.7% identity (68.7% similar) in 211 aa overlap (34-237:181-363)

            10        20        30        40         50        60  
pF1KB7 SGASQPLLINMYLPDPVGDGLFKDGKNPSWGPLSPAVQK-GSGQIQLWQFLLELLADRAN
                                     :: :  . . :::::::::::::::.: .:
NP_001 TPQSKAAQPSPSTVPKTEDQRPQLDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSN
              160       170       180       190       200       210

             70        80        90       100       110       120  
pF1KB7 AGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRY
       ..::.::: .::::.:::::::::::::::::::::::::::::::::::::.:::::::
NP_001 SSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRY
              220       230       240       250       260       270

            130       140       150       160       170            
pF1KB7 AYRFDFQGLAQACQPPPAHAHAAAAAAAAAAAAQDGALYKLPAGLAPLPFPGL-----SK
       ::.:::.:.::: :: :                 ...::: :.    ::. :      .:
NP_001 AYKFDFHGIAQALQPHPP----------------ESSLYKYPSD---LPYMGSYHAHPQK
              280                       290          300       310 

       180       190        200       210       220       230      
pF1KB7 LNLMAASAGVAPA-GFSYWPGPGPAATAAAATAALYPSPSLQPPPGPFGAVAAASHLGGH
       .:..:    . :. . :.. .:.:  ..   :...::.  :     :       :::: .
NP_001 MNFVAPHPPALPVTSSSFFAAPNPYWNSP--TGGIYPNTRLPTSHMP-------SHLGTY
             320       330       340         350              360  

         
pF1KB7 YH
       : 
NP_001 Y 
         




238 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 00:37:25 2016 done: Mon Nov  7 00:37:26 2016
 Total Scan time:  7.770 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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