FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1470, 181 aa 1>>>pF1KE1470 181 - 181 aa - 181 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0597+/-0.000348; mu= 13.6246+/- 0.022 mean_var=58.6962+/-11.460, 0's: 0 Z-trim(112.9): 85 B-trim: 0 in 0/49 Lambda= 0.167405 statistics sampled from 21845 (21938) to 21845 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.654), E-opt: 0.2 (0.257), width: 16 Scan time: 5.450 The best scores are: opt bits E(85289) NP_004104 (OMIM: 601513,617166) fibroblast growth ( 181) 1195 296.8 1.3e-80 XP_005247284 (OMIM: 601513,617166) PREDICTED: fibr ( 207) 1171 291.0 8.1e-79 NP_066360 (OMIM: 601513,617166) fibroblast growth ( 243) 1171 291.0 9.3e-79 XP_006713601 (OMIM: 601513,617166) PREDICTED: fibr ( 178) 1166 289.8 1.6e-78 XP_016861368 (OMIM: 601513,617166) PREDICTED: fibr ( 157) 1039 259.1 2.5e-69 NP_001308867 (OMIM: 601515,609307) fibroblast grow ( 187) 928 232.3 3.4e-61 NP_001308869 (OMIM: 601515,609307) fibroblast grow ( 187) 928 232.3 3.4e-61 NP_001308862 (OMIM: 601515,609307) fibroblast grow ( 187) 928 232.3 3.4e-61 NP_004106 (OMIM: 601515,609307) fibroblast growth ( 247) 926 231.9 6.1e-61 NP_001308870 (OMIM: 601515,609307) fibroblast grow ( 185) 922 230.8 9.3e-61 NP_001308876 (OMIM: 601515,609307) fibroblast grow ( 200) 922 230.8 9.9e-61 NP_001308877 (OMIM: 601515,609307) fibroblast grow ( 213) 922 230.9 1e-60 NP_001308874 (OMIM: 601515,609307) fibroblast grow ( 213) 922 230.9 1e-60 NP_787125 (OMIM: 601515,609307) fibroblast growth ( 252) 922 230.9 1.2e-60 NP_001308865 (OMIM: 601515,609307) fibroblast grow ( 184) 920 230.3 1.3e-60 NP_001308861 (OMIM: 601515,609307) fibroblast grow ( 184) 920 230.3 1.3e-60 NP_001308873 (OMIM: 601515,609307) fibroblast grow ( 184) 920 230.3 1.3e-60 NP_001132970 (OMIM: 300070) fibroblast growth fact ( 199) 856 214.9 6.2e-56 NP_001132973 (OMIM: 300070) fibroblast growth fact ( 226) 851 213.7 1.6e-55 NP_001132974 (OMIM: 300070) fibroblast growth fact ( 226) 851 213.7 1.6e-55 NP_001132972 (OMIM: 300070) fibroblast growth fact ( 255) 851 213.8 1.8e-55 XP_005262456 (OMIM: 300070) PREDICTED: fibroblast ( 255) 851 213.8 1.8e-55 NP_378668 (OMIM: 300070) fibroblast growth factor ( 192) 845 212.2 3.8e-55 NP_004105 (OMIM: 300070) fibroblast growth factor ( 245) 845 212.3 4.7e-55 NP_001308871 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308864 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308878 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308875 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308860 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308863 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308872 (OMIM: 601515,609307) fibroblast grow ( 163) 814 204.7 5.9e-53 NP_001308868 (OMIM: 601515,609307) fibroblast grow ( 215) 733 185.2 5.8e-47 NP_001290389 (OMIM: 601514) fibroblast growth fact ( 166) 709 179.4 2.6e-45 NP_004103 (OMIM: 601514) fibroblast growth factor ( 225) 705 178.5 6.6e-45 NP_001308866 (OMIM: 601515,609307) fibroblast grow ( 159) 396 103.8 1.4e-22 NP_002001 (OMIM: 600921,612961) fibroblast growth ( 208) 385 101.2 1.1e-21 NP_062825 (OMIM: 605558,615721) fibroblast growth ( 211) 383 100.7 1.6e-21 NP_003859 (OMIM: 300827,309630) fibroblast growth ( 207) 369 97.3 1.6e-20 XP_005248321 (OMIM: 149730,180920,602115) PREDICTE ( 208) 317 84.7 9.9e-17 NP_004456 (OMIM: 149730,180920,602115) fibroblast ( 208) 317 84.7 9.9e-17 NP_004455 (OMIM: 165190,190330) fibroblast growth ( 268) 314 84.1 2e-16 NP_002000 (OMIM: 148180) fibroblast growth factor ( 194) 298 80.1 2.3e-15 NP_065688 (OMIM: 605831) fibroblast growth factor ( 170) 296 79.6 2.8e-15 NP_066276 (OMIM: 134921) fibroblast growth factor ( 208) 291 78.5 7.7e-15 XP_011533298 (OMIM: 600921,612961) PREDICTED: fibr ( 158) 287 77.4 1.2e-14 NP_001998 (OMIM: 164980) fibroblast growth factor ( 206) 278 75.3 6.8e-14 NP_001244134 (OMIM: 131220) fibroblast growth fact ( 155) 263 71.6 6.5e-13 NP_000791 (OMIM: 131220) fibroblast growth factor ( 155) 263 71.6 6.5e-13 NP_001244136 (OMIM: 131220) fibroblast growth fact ( 155) 263 71.6 6.5e-13 NP_001244139 (OMIM: 131220) fibroblast growth fact ( 155) 263 71.6 6.5e-13 >>NP_004104 (OMIM: 601513,617166) fibroblast growth fact (181 aa) initn: 1195 init1: 1195 opt: 1195 Z-score: 1568.2 bits: 296.8 E(85289): 1.3e-80 Smith-Waterman score: 1195; 99.4% identity (99.4% similar) in 181 aa overlap (1-181:1-181) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_004 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: NP_004 IMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS 130 140 150 160 170 180 pF1KE1 T : NP_004 T >>XP_005247284 (OMIM: 601513,617166) PREDICTED: fibrobla (207 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1536.0 bits: 291.0 E(85289): 8.1e-79 Smith-Waterman score: 1171; 99.4% identity (99.4% similar) in 177 aa overlap (5-181:31-207) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT :::::::::::::::::::::::::::::: XP_005 MKILELSLKKGVHMLQCLCGRSLRSSDSPSEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: XP_005 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEI 130 140 150 160 170 180 160 170 180 pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST ::::::::::::::::::::::::::: XP_005 GEKQGRSRKSSGTPTMNGGKVVNQDST 190 200 >>NP_066360 (OMIM: 601513,617166) fibroblast growth fact (243 aa) initn: 1171 init1: 1171 opt: 1171 Z-score: 1535.0 bits: 291.0 E(85289): 9.3e-79 Smith-Waterman score: 1171; 99.4% identity (99.4% similar) in 177 aa overlap (5-181:67-243) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT :::::::::::::::::::::::::::::: NP_066 GRSLCERHVLGVFSKVRFCSGRKRPVRRRPEPQLKGIVTRLFSQQGYFLQMHPDGTIDGT 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_066 KDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYY 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEI :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: NP_066 VIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEI 160 170 180 190 200 210 160 170 180 pF1KE1 GEKQGRSRKSSGTPTMNGGKVVNQDST ::::::::::::::::::::::::::: NP_066 GEKQGRSRKSSGTPTMNGGKVVNQDST 220 230 240 >>XP_006713601 (OMIM: 601513,617166) PREDICTED: fibrobla (178 aa) initn: 1166 init1: 1166 opt: 1166 Z-score: 1530.5 bits: 289.8 E(85289): 1.6e-78 Smith-Waterman score: 1166; 98.9% identity (99.4% similar) in 177 aa overlap (5-181:2-178) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK .::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MKPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: XP_006 IMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS 120 130 140 150 160 170 pF1KE1 T : XP_006 T >>XP_016861368 (OMIM: 601513,617166) PREDICTED: fibrobla (157 aa) initn: 1039 init1: 1039 opt: 1039 Z-score: 1365.6 bits: 259.1 E(85289): 2.5e-69 Smith-Waterman score: 1039; 99.4% identity (99.4% similar) in 157 aa overlap (25-181:1-157) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK :::::::::::::::::::::::::::::::::::: XP_016 MHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK 10 20 30 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS :::::::::::::::::::::::::::: ::::::::::::::::::::::::::::::: XP_016 IMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDS 100 110 120 130 140 150 pF1KE1 T : XP_016 T >>NP_001308867 (OMIM: 601515,609307) fibroblast growth f (187 aa) initn: 919 init1: 881 opt: 928 Z-score: 1219.5 bits: 232.3 E(85289): 3.4e-61 Smith-Waterman score: 928; 73.7% identity (89.8% similar) in 186 aa overlap (1-181:1-186) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK : ..::::::::::. .:::.:::::::..:::::.... ::::::::::::::::::: NP_001 MPREDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ ..::.::::::::: :..::::::::::::::::::::: :::::::::::::::::::: NP_001 TGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQ 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGE---KQGR--SRKSSGTPTMNGGKV :::::::::::..::.:::.:: :::: :::..:: : : :...:.. ::::: NP_001 AMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKP 130 140 150 160 170 180 180 pF1KE1 VNQDST ::...: NP_001 VNKSKTT >>NP_001308869 (OMIM: 601515,609307) fibroblast growth f (187 aa) initn: 919 init1: 881 opt: 928 Z-score: 1219.5 bits: 232.3 E(85289): 3.4e-61 Smith-Waterman score: 928; 73.7% identity (89.8% similar) in 186 aa overlap (1-181:1-186) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK : ..::::::::::. .:::.:::::::..:::::.... ::::::::::::::::::: NP_001 MPREDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ ..::.::::::::: :..::::::::::::::::::::: :::::::::::::::::::: NP_001 TGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQ 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGE---KQGR--SRKSSGTPTMNGGKV :::::::::::..::.:::.:: :::: :::..:: : : :...:.. ::::: NP_001 AMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKP 130 140 150 160 170 180 180 pF1KE1 VNQDST ::...: NP_001 VNKSKTT >>NP_001308862 (OMIM: 601515,609307) fibroblast growth f (187 aa) initn: 919 init1: 881 opt: 928 Z-score: 1219.5 bits: 232.3 E(85289): 3.4e-61 Smith-Waterman score: 928; 73.7% identity (89.8% similar) in 186 aa overlap (1-181:1-186) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK : ..::::::::::. .:::.:::::::..:::::.... ::::::::::::::::::: NP_001 MPREDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ ..::.::::::::: :..::::::::::::::::::::: :::::::::::::::::::: NP_001 TGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQ 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGE---KQGR--SRKSSGTPTMNGGKV :::::::::::..::.:::.:: :::: :::..:: : : :...:.. ::::: NP_001 AMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKP 130 140 150 160 170 180 180 pF1KE1 VNQDST ::...: NP_001 VNKSKTT >>NP_004106 (OMIM: 601515,609307) fibroblast growth fact (247 aa) initn: 917 init1: 879 opt: 926 Z-score: 1215.1 bits: 231.9 E(85289): 6.1e-61 Smith-Waterman score: 926; 73.1% identity (90.3% similar) in 186 aa overlap (1-181:61-246) 10 20 30 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGT .. ..::::::::::. .:::.:::::::. NP_004 SSPSKNRGLCNGNLVDIFSKVRIFGLKKRRLRRQDPQLKGIVTRLYCRQGYYLQMHPDGA 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE1 IDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVF .:::::.... :::::::::::::::::::..::.::::::::: :..:::::::::::: NP_004 LDGTKDDSTNSTLFNLIPVGLRVVAIQGVKTGLYIAMNGEGYLYPSELFTPECKFKESVF 100 110 120 130 140 150 100 110 120 130 140 150 pF1KE1 ENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREQS ::::::::: :::::::::::::::::::: :::::::::::..::.:::.:: :::: : NP_004 ENYYVIYSSMLYRQQESGRAWFLGLNKEGQAMKGNRVKKTKPAAHFLPKPLEVAMYREPS 160 170 180 190 200 210 160 170 180 pF1KE1 LHEIGE---KQGR--SRKSSGTPTMNGGKVVNQDST ::..:: : : :...:.. ::::: ::...: NP_004 LHDVGETVPKPGVTPSKSTSASAIMNGGKPVNKSKTT 220 230 240 >>NP_001308870 (OMIM: 601515,609307) fibroblast growth f (185 aa) initn: 913 init1: 875 opt: 922 Z-score: 1211.8 bits: 230.8 E(85289): 9.3e-61 Smith-Waterman score: 922; 74.7% identity (90.7% similar) in 182 aa overlap (5-181:3-184) 10 20 30 40 50 60 pF1KE1 MESKEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVK .::::::::::. .:::.:::::::..:::::.... ::::::::::::::::::: NP_001 MTDPQLKGIVTRLYCRQGYYLQMHPDGALDGTKDDSTNSTLFNLIPVGLRVVAIQGVK 10 20 30 40 50 70 80 90 100 110 120 pF1KE1 ASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQ ..::.::::::::: :..::::::::::::::::::::: :::::::::::::::::::: NP_001 TGLYIAMNGEGYLYPSELFTPECKFKESVFENYYVIYSSMLYRQQESGRAWFLGLNKEGQ 60 70 80 90 100 110 130 140 150 160 170 pF1KE1 IMKGNRVKKTKPSSHFVPKPIEVCMYREQSLHEIGE---KQGR--SRKSSGTPTMNGGKV :::::::::::..::.:::.:: :::: :::..:: : : :...:.. ::::: NP_001 AMKGNRVKKTKPAAHFLPKPLEVAMYREPSLHDVGETVPKPGVTPSKSTSASAIMNGGKP 120 130 140 150 160 170 180 pF1KE1 VNQDST ::...: NP_001 VNKSKTT 180 181 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:38:42 2016 done: Mon Nov 7 00:38:43 2016 Total Scan time: 5.450 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]