FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5502, 394 aa 1>>>pF1KE5502 394 - 394 aa - 394 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3203+/-0.000799; mu= 13.4674+/- 0.049 mean_var=102.6242+/-20.077, 0's: 0 Z-trim(110.4): 16 B-trim: 0 in 0/52 Lambda= 0.126605 statistics sampled from 11605 (11607) to 11605 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.357), width: 16 Scan time: 3.150 The best scores are: opt bits E(32554) CCDS4138.1 PHAX gene_id:51808|Hs108|chr5 ( 394) 2583 482.0 4.1e-136 >>CCDS4138.1 PHAX gene_id:51808|Hs108|chr5 (394 aa) initn: 2583 init1: 2583 opt: 2583 Z-score: 2557.2 bits: 482.0 E(32554): 4.1e-136 Smith-Waterman score: 2583; 100.0% identity (100.0% similar) in 394 aa overlap (1-394:1-394) 10 20 30 40 50 60 pF1KE5 MALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPKVLGGDSAMRAFQNTATACAPVSHYRAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 MALEVGDMEDGQLSDSDSDMTVAPSDRPLQLPKVLGGDSAMRAFQNTATACAPVSHYRAV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 ESVDSSEESFSDSDDDSCLWKRKRQKCFNPPPKPEPFQFGQSSQKPPVAGGKKINNIWGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 ESVDSSEESFSDSDDDSCLWKRKRQKCFNPPPKPEPFQFGQSSQKPPVAGGKKINNIWGA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VLQEQNQDAVATELGILGMEGTIDRSRQSETYNYLLAKKLRKESQEHTKDLDKELDEYMH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 VLQEQNQDAVATELGILGMEGTIDRSRQSETYNYLLAKKLRKESQEHTKDLDKELDEYMH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 GGKKMGSKEEENGQGHLKRKRPVKDRLGNRPEMNYKGRYEITAEDSQEKVADEISFRLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 GGKKMGSKEEENGQGHLKRKRPVKDRLGNRPEMNYKGRYEITAEDSQEKVADEISFRLQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 PKKDLIARVVRIIGNKKAIELLMETAEVEQNGGLFIMNGSRRRTPGGVFLNLLKNTPSIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 PKKDLIARVVRIIGNKKAIELLMETAEVEQNGGLFIMNGSRRRTPGGVFLNLLKNTPSIS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 EEQIKDIFYIENQKEYENKKAARKRRTQVLGKKMKQAIKSLNFQEDDDTSRETFASDTNE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS41 EEQIKDIFYIENQKEYENKKAARKRRTQVLGKKMKQAIKSLNFQEDDDTSRETFASDTNE 310 320 330 340 350 360 370 380 390 pF1KE5 ALASLDESQEGHAEAKLEAEEAIEVDHSHDLDIF :::::::::::::::::::::::::::::::::: CCDS41 ALASLDESQEGHAEAKLEAEEAIEVDHSHDLDIF 370 380 390 394 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:17:12 2016 done: Tue Nov 8 01:17:13 2016 Total Scan time: 3.150 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]