FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2160, 225 aa 1>>>pF1KE2160 225 - 225 aa - 225 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0082+/-0.000401; mu= 15.8605+/- 0.025 mean_var=64.7555+/-12.970, 0's: 0 Z-trim(111.6): 51 B-trim: 1108 in 1/48 Lambda= 0.159381 statistics sampled from 20252 (20303) to 20252 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.594), E-opt: 0.2 (0.238), width: 16 Scan time: 5.950 The best scores are: opt bits E(85289) NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] ( 225) 1499 353.3 1.9e-97 NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] ( 224) 905 216.7 2.4e-56 NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] ( 220) 694 168.2 9.7e-42 NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] ( 217) 685 166.1 4e-41 NP_067018 (OMIM: 615798) claudin-6 precursor [Homo ( 220) 671 162.9 3.8e-40 NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] ( 209) 655 159.2 4.7e-39 XP_016884418 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 630 153.6 3.4e-37 NP_001124333 (OMIM: 602101) claudin-5 [Homo sapien ( 303) 630 153.6 3.4e-37 XP_016884419 (OMIM: 602101) PREDICTED: claudin-5 i ( 303) 630 153.6 3.4e-37 NP_003268 (OMIM: 602101) claudin-5 [Homo sapiens] ( 303) 630 153.6 3.4e-37 NP_001298 (OMIM: 609131) claudin-7 isoform 1 precu ( 211) 624 152.1 6.6e-37 NP_001171951 (OMIM: 609131) claudin-7 isoform 1 pr ( 211) 624 152.1 6.6e-37 NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211) 588 143.8 2e-34 NP_652763 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 552 135.6 7e-32 NP_001139551 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 552 135.6 7e-32 NP_036262 (OMIM: 605608,614035) claudin-14 [Homo s ( 239) 552 135.6 7e-32 NP_001139549 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 552 135.6 7e-32 NP_001139550 (OMIM: 605608,614035) claudin-14 [Hom ( 239) 552 135.6 7e-32 NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211) 549 134.9 1e-31 NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224) 549 134.9 1.1e-31 NP_001164566 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 503 124.3 1.7e-28 NP_065117 (OMIM: 300520) claudin-2 [Homo sapiens] ( 230) 503 124.3 1.7e-28 NP_001164563 (OMIM: 300520) claudin-2 [Homo sapien ( 230) 503 124.3 1.7e-28 NP_001171952 (OMIM: 609131) claudin-7 isoform 2 pr ( 145) 452 112.5 3.9e-25 NP_055158 (OMIM: 615778) claudin-15 [Homo sapiens] ( 228) 450 112.1 7.7e-25 NP_001172009 (OMIM: 615778) claudin-15 [Homo sapie ( 228) 450 112.1 7.7e-25 NP_001172046 (OMIM: 248190,610036) claudin-19 isof ( 218) 417 104.5 1.4e-22 NP_001002026 (OMIM: 609210) claudin-18 isoform 2 [ ( 261) 338 86.4 4.9e-17 NP_057453 (OMIM: 609210) claudin-18 isoform 1 prec ( 261) 335 85.7 7.9e-17 NP_005593 (OMIM: 601326) claudin-11 isoform 1 [Hom ( 207) 253 66.8 3.1e-11 NP_006571 (OMIM: 248250,603959) claudin-16 [Homo s ( 305) 229 61.4 1.9e-09 NP_919260 (OMIM: 609203) claudin-23 [Homo sapiens] ( 292) 224 60.2 4.1e-09 NP_001171985 (OMIM: 601326) claudin-11 isoform 2 p ( 123) 154 43.9 0.00015 >>NP_955360 (OMIM: 611231) claudin-8 [Homo sapiens] (225 aa) initn: 1499 init1: 1499 opt: 1499 Z-score: 1870.6 bits: 353.3 E(85289): 1.9e-97 Smith-Waterman score: 1499; 100.0% identity (100.0% similar) in 225 aa overlap (1-225:1-225) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_955 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_955 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_955 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA 130 140 150 160 170 180 190 200 210 220 pF1KE2 LFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV ::::::::::::::::::::::::::::::::::::::::::::: NP_955 LFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV 190 200 210 220 >>NP_036263 (OMIM: 617005) claudin-17 [Homo sapiens] (224 aa) initn: 954 init1: 901 opt: 905 Z-score: 1132.4 bits: 216.7 E(85289): 2.4e-56 Smith-Waterman score: 905; 57.9% identity (86.4% similar) in 214 aa overlap (1-214:1-210) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI :: . :.:::: :: .:::::.:.:..::::::::. .::.::: .::::::::.::: . NP_036 MAFYPLQIAGLVLGFLGMVGTLATTLLPQWRVSAFVGSNIIVFERLWEGLWMNCIRQARV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL :.:::.:.::::: : :..::.:::.: ..:..:....: ::: ..:::.::..::..: NP_036 RLQCKFYSSLLALPPALETARALMCVAVALSLIALLIGICGMKQVQCTGSNERAKAYLLG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA :.:..::.::. :::::::.:: ::::::: ....:::::: ::.:::..: ::..::. NP_036 TSGVLFILTGIFVLIPVSWTANIIIRDFYNPAIHIGQKRELGAALFLGWASAAVLFIGGG 130 140 150 160 170 180 190 200 210 220 pF1KE2 LFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV :.: :::.:...::: .:..:. :: :. NP_036 LLCGFCCCNRKKQGYRYPVPGYRVP----HTDKRRNTTMLSKTSTSYV 190 200 210 220 >>NP_001297 (OMIM: 602910) claudin-3 [Homo sapiens] (220 aa) initn: 396 init1: 396 opt: 694 Z-score: 870.3 bits: 168.2 E(85289): 9.7e-42 Smith-Waterman score: 694; 44.8% identity (78.0% similar) in 223 aa overlap (3-225:2-220) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI . .:::.: :. .: .::.. ..:.::::::: .::.. .:.::::::::: :.. NP_001 MSMGLEITGTALAVLGWLGTIVCCALPMWRVSAFIGSNIITSQNIWEGLWMNCVVQSTG 10 20 30 40 50 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL .::::.::::::: ::::::.:. .: ... .....:..: .:: :. :. .::.: . NP_001 QMQCKVYDSLLALPQDLQAARALIVVAILLAAFGLLVALVGAQCTNCVQDDT-AKAKITI 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA .::..:.......:.:::: ::.::::::: .: :::::.: .::.::..: . ..::: NP_001 VAGVLFLLAALLTLVPVSWSANTIIRDFYNPVVPEAQKREMGAGLYVGWAAAALQLLGGA 120 130 140 150 160 170 190 200 210 220 pF1KE2 LFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV :.:: : . ..: . . .. .: : . . :.:..:: NP_001 LLCC--SCPPREKKYTATKVVY-SAPRSTGPGASLGTGYDRKDYV 180 190 200 210 220 >>NP_066192 (OMIM: 615799) claudin-9 [Homo sapiens] (217 aa) initn: 407 init1: 388 opt: 685 Z-score: 859.2 bits: 166.1 E(85289): 4e-41 Smith-Waterman score: 685; 51.2% identity (78.3% similar) in 207 aa overlap (1-201:1-204) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI ::. .::. :. :. .: .::.. ..: :.:.::: :.::: . ::::::.:: :.. NP_066 MASTGLELLGMTLAVLGWLGTLVSCALPLWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL .::::.::::::: ::::::.: : ....:....:: : .:: :. : : .::.:.: NP_066 QMQCKVYDSLLALPQDLQAARALCVIALLLALLGLLVAITGAQCTTCVED-EGAKARIVL 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA :::.:....:..::::: :.:.:::.:::: .: : ::::: .:::::..: .:..::. NP_066 TAGVILLLAGILVLIPVCWTAHAIIQDFYNPLVAEALKRELGASLYLGWAAAALLMLGGG 120 130 140 150 160 170 190 200 210 220 pF1KE2 LFCCVFCCN----EKSSSYR--YSIPSHRTTQKSYHTGKKSPSVYSRSQYV :.::. : :. . : ::::: NP_066 LLCCT--CPPPQVERPRGPRLGYSIPSRSGASGLDKRDYV 180 190 200 210 >>NP_067018 (OMIM: 615798) claudin-6 precursor [Homo sap (220 aa) initn: 357 init1: 330 opt: 671 Z-score: 841.8 bits: 162.9 E(85289): 3.8e-40 Smith-Waterman score: 671; 44.9% identity (76.0% similar) in 225 aa overlap (1-225:1-220) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI ::. ...: :. : .: :. .. ..:.:.:.::: :.::: . ::::::.:: :.. NP_067 MASAGMQILGVVLTLLGWVNGLVSCALPMWKVTAFIGNSIVVAQVVWEGLWMSCVVQSTG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL .::::.::::::: ::::::.: : ......... . : ::: :. .... ::...: NP_067 QMQCKVYDSLLALPQDLQAARALCVIALLVALFGLLVYLAGAKCTTCVEEKDS-KARLVL 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA :.::.:.:.:...:::: :.:.:::::::: .: ::::::: .:::::... .:..::. NP_067 TSGIVFVISGVLTLIPVCWTAHAIIRDFYNPLVAEAQKRELGASLYLGWAASGLLLLGGG 120 130 140 150 160 170 190 200 210 220 pF1KE2 LFCCVFCCNEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV :.::. : . :.. . . . :. . : :: : ..:: NP_067 LLCCT-CPSGGSQGPSHYMARYSTSAPAISRG---PSEYPTKNYV 180 190 200 210 220 >>NP_001296 (OMIM: 602909) claudin-4 [Homo sapiens] (209 aa) initn: 396 init1: 396 opt: 655 Z-score: 822.2 bits: 159.2 E(85289): 4.7e-39 Smith-Waterman score: 655; 45.3% identity (80.1% similar) in 201 aa overlap (1-198:1-198) 10 20 30 40 50 60 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQWRVSAFIENNIVVFENFWEGLWMNCVRQANI ::. .:.. :. :. .: .... ..:.:::.::: .:::. ...::::::::: :.. NP_001 MASMGLQVMGIALAVLGWLAVMLCCALPMWRVTAFIGSNIVTSQTIWEGLWMNCVVQSTG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RMQCKIYDSLLALSPDLQAARGLMCAASVMSFLAFMMAILGMKCTRCTGDNEKVKAHILL .::::.::::::: ::::::.:. . ... :. .....: ::: : : :..::. .. NP_001 QMQCKVYDSLLALPQDLQAARALVIISIIVAALGVLLSVVGGKCTNCLED-ESAKAKTMI 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 TAGIIFIITGMVVLIPVSWVANAIIRDFYNSIVNVAQKRELGEALYLGWTTALVLIVGGA .::..:...:..:..::::.:. ::.:::: .: .::::.: .::.::... .:..::. NP_001 VAGVVFLLAGLMVIVPVSWTAHNIIQDFYNPLVASGQKREMGASLYVGWAASGLLLLGGG 120 130 140 150 160 170 190 200 210 220 pF1KE2 LFCCVFCC---NEKSSSYRYSIPSHRTTQKSYHTGKKSPSVYSRSQYV :.:: : ..: : .:: NP_001 LLCC--NCPPRTDKPYSAKYSAARSAAASNYV 180 190 200 >>XP_016884418 (OMIM: 602101) PREDICTED: claudin-5 isofo (303 aa) initn: 614 init1: 359 opt: 630 Z-score: 788.8 bits: 153.6 E(85289): 3.4e-37 Smith-Waterman score: 630; 42.3% identity (76.1% similar) in 213 aa overlap (1-209:86-297) 10 20 30 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQW :.. :::: :: : :: : . . .:.: XP_016 GAKAPGPAQGAAQHGLGGSAGLRVRVSPLAMGSAALEILGLVLCLVGWGGLILACGLPMW 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE2 RVSAFIENNIVVFENFWEGLWMNCVRQANIRMQCKIYDSLLALSPDLQAARGLMCAASVM .:.::...:::. .. :.::::.:: :.. .::::.:::.:::: ..::::.: .: .. XP_016 QVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLL 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE2 SFLAFMMAILGMKCTRCTGDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRDFYN .:.:..... : .:: :.. . .::.. ::.:..... :...:.:. : :: ..:.::. XP_016 AFVALFVTLAGAQCTTCVAPGP-AKARVALTGGVLYLFCGLLALVPLCWFANIVVREFYD 180 190 200 210 220 230 160 170 180 190 200 pF1KE2 SIVNVAQKRELGEALYLGWTTALVLIVGGALFCC--VFCCNEKSSSY--RYSIPSHRTTQ : :.:: ::: :::.::... .:.::: :.:: : .. . :. .:: : . :. XP_016 PSVPVSQKYELGAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPRRPTAT 240 250 260 270 280 290 210 220 pF1KE2 KSYHTGKKSPSVYSRSQYV .: XP_016 GDYDKKNYV 300 >>NP_001124333 (OMIM: 602101) claudin-5 [Homo sapiens] (303 aa) initn: 614 init1: 359 opt: 630 Z-score: 788.8 bits: 153.6 E(85289): 3.4e-37 Smith-Waterman score: 630; 42.3% identity (76.1% similar) in 213 aa overlap (1-209:86-297) 10 20 30 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQW :.. :::: :: : :: : . . .:.: NP_001 GAKAPGPAQGAAQHGLGGSAGLRVRVSPLAMGSAALEILGLVLCLVGWGGLILACGLPMW 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE2 RVSAFIENNIVVFENFWEGLWMNCVRQANIRMQCKIYDSLLALSPDLQAARGLMCAASVM .:.::...:::. .. :.::::.:: :.. .::::.:::.:::: ..::::.: .: .. NP_001 QVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLL 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE2 SFLAFMMAILGMKCTRCTGDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRDFYN .:.:..... : .:: :.. . .::.. ::.:..... :...:.:. : :: ..:.::. NP_001 AFVALFVTLAGAQCTTCVAPGP-AKARVALTGGVLYLFCGLLALVPLCWFANIVVREFYD 180 190 200 210 220 230 160 170 180 190 200 pF1KE2 SIVNVAQKRELGEALYLGWTTALVLIVGGALFCC--VFCCNEKSSSY--RYSIPSHRTTQ : :.:: ::: :::.::... .:.::: :.:: : .. . :. .:: : . :. NP_001 PSVPVSQKYELGAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPRRPTAT 240 250 260 270 280 290 210 220 pF1KE2 KSYHTGKKSPSVYSRSQYV .: NP_001 GDYDKKNYV 300 >>XP_016884419 (OMIM: 602101) PREDICTED: claudin-5 isofo (303 aa) initn: 614 init1: 359 opt: 630 Z-score: 788.8 bits: 153.6 E(85289): 3.4e-37 Smith-Waterman score: 630; 42.3% identity (76.1% similar) in 213 aa overlap (1-209:86-297) 10 20 30 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQW :.. :::: :: : :: : . . .:.: XP_016 GAKAPGPAQGAAQHGLGGSAGLRVRVSPLAMGSAALEILGLVLCLVGWGGLILACGLPMW 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE2 RVSAFIENNIVVFENFWEGLWMNCVRQANIRMQCKIYDSLLALSPDLQAARGLMCAASVM .:.::...:::. .. :.::::.:: :.. .::::.:::.:::: ..::::.: .: .. XP_016 QVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLL 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE2 SFLAFMMAILGMKCTRCTGDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRDFYN .:.:..... : .:: :.. . .::.. ::.:..... :...:.:. : :: ..:.::. XP_016 AFVALFVTLAGAQCTTCVAPGP-AKARVALTGGVLYLFCGLLALVPLCWFANIVVREFYD 180 190 200 210 220 230 160 170 180 190 200 pF1KE2 SIVNVAQKRELGEALYLGWTTALVLIVGGALFCC--VFCCNEKSSSY--RYSIPSHRTTQ : :.:: ::: :::.::... .:.::: :.:: : .. . :. .:: : . :. XP_016 PSVPVSQKYELGAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPRRPTAT 240 250 260 270 280 290 210 220 pF1KE2 KSYHTGKKSPSVYSRSQYV .: XP_016 GDYDKKNYV 300 >>NP_003268 (OMIM: 602101) claudin-5 [Homo sapiens] (303 aa) initn: 614 init1: 359 opt: 630 Z-score: 788.8 bits: 153.6 E(85289): 3.4e-37 Smith-Waterman score: 630; 42.3% identity (76.1% similar) in 213 aa overlap (1-209:86-297) 10 20 30 pF1KE2 MATHALEIAGLFLGGVGMVGTVAVTVMPQW :.. :::: :: : :: : . . .:.: NP_003 GAKAPGPAQGAAQHGLGGSAGLRVRVSPLAMGSAALEILGLVLCLVGWGGLILACGLPMW 60 70 80 90 100 110 40 50 60 70 80 90 pF1KE2 RVSAFIENNIVVFENFWEGLWMNCVRQANIRMQCKIYDSLLALSPDLQAARGLMCAASVM .:.::...:::. .. :.::::.:: :.. .::::.:::.:::: ..::::.: .: .. NP_003 QVTAFLDHNIVTAQTTWKGLWMSCVVQSTGHMQCKVYDSVLALSTEVQAARALTVSAVLL 120 130 140 150 160 170 100 110 120 130 140 150 pF1KE2 SFLAFMMAILGMKCTRCTGDNEKVKAHILLTAGIIFIITGMVVLIPVSWVANAIIRDFYN .:.:..... : .:: :.. . .::.. ::.:..... :...:.:. : :: ..:.::. NP_003 AFVALFVTLAGAQCTTCVAPGP-AKARVALTGGVLYLFCGLLALVPLCWFANIVVREFYD 180 190 200 210 220 230 160 170 180 190 200 pF1KE2 SIVNVAQKRELGEALYLGWTTALVLIVGGALFCC--VFCCNEKSSSY--RYSIPSHRTTQ : :.:: ::: :::.::... .:.::: :.:: : .. . :. .:: : . :. NP_003 PSVPVSQKYELGAALYIGWAATALLMVGGCLLCCGAWVCTGRPDLSFPVKYSAPRRPTAT 240 250 260 270 280 290 210 220 pF1KE2 KSYHTGKKSPSVYSRSQYV .: NP_003 GDYDKKNYV 300 225 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 00:42:15 2016 done: Mon Nov 7 00:42:16 2016 Total Scan time: 5.950 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]