FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4321, 325 aa 1>>>pF1KE4321 325 - 325 aa - 325 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2395+/-0.000712; mu= 17.6066+/- 0.043 mean_var=79.2391+/-15.832, 0's: 0 Z-trim(111.5): 5 B-trim: 195 in 1/50 Lambda= 0.144080 statistics sampled from 12403 (12404) to 12403 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.381), width: 16 Scan time: 2.920 The best scores are: opt bits E(32554) CCDS6415.1 CYC1 gene_id:1537|Hs108|chr8 ( 325) 2202 466.7 1.1e-131 >>CCDS6415.1 CYC1 gene_id:1537|Hs108|chr8 (325 aa) initn: 2202 init1: 2202 opt: 2202 Z-score: 2477.4 bits: 466.7 E(32554): 1.1e-131 Smith-Waterman score: 2202; 99.7% identity (100.0% similar) in 325 aa overlap (1-325:1-325) 10 20 30 40 50 60 pF1KE4 MAAAAASLRGVVLGPRGAGLPGARARGLLCSARPGQLPLRTPQAVALSSKSGLSRGRKVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 MAAAAASLRGVVLGPRGAGLPGARARGLLCSARPGQLPLRTPQAVALSSKSGLSRGRKVM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LSALGMLAAGGAGLAVALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQV :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: CCDS64 LSALGMLAAGGAGLAMALHSAVSASDLELHPPSYPWSHRGLLSSLDHTSIRRGFQVYKQV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 CASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 CASCHSMDFVAYRHLVGVCYTEDEAKELAAEVEVQDGPNEDGEMFMRPGKLFDYFPKPYP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 NSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 NSEAARAANNGALPPDLSYIVRARHGGEDYVFSLLTGYCEPPTGVSLREGLYFNPYFPGQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 AIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS64 AIAMAPPIYTDVLEFDDGTPATMSQIAKDVCTFLRWASEPEHDHRKRMGLKMLMMMALLV 250 260 270 280 290 300 310 320 pF1KE4 PLVYTIKRHKWSVLKSRKLAYRPPK ::::::::::::::::::::::::: CCDS64 PLVYTIKRHKWSVLKSRKLAYRPPK 310 320 325 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:10:41 2016 done: Sat Nov 5 23:10:42 2016 Total Scan time: 2.920 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]