FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2233, 662 aa 1>>>pF1KE2233 662 - 662 aa - 662 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2208+/-0.000826; mu= 15.4104+/- 0.050 mean_var=79.0270+/-15.343, 0's: 0 Z-trim(107.8): 20 B-trim: 0 in 0/52 Lambda= 0.144273 statistics sampled from 9777 (9791) to 9777 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.66), E-opt: 0.2 (0.301), width: 16 Scan time: 2.710 The best scores are: opt bits E(32554) CCDS11214.1 AKAP10 gene_id:11216|Hs108|chr17 ( 662) 4333 911.6 0 CCDS82091.1 AKAP10 gene_id:11216|Hs108|chr17 ( 604) 3207 677.2 1.8e-194 >>CCDS11214.1 AKAP10 gene_id:11216|Hs108|chr17 (662 aa) initn: 4333 init1: 4333 opt: 4333 Z-score: 4870.8 bits: 911.6 E(32554): 0 Smith-Waterman score: 4333; 100.0% identity (100.0% similar) in 662 aa overlap (1-662:1-662) 10 20 30 40 50 60 pF1KE2 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST 610 620 630 640 650 660 pF1KE2 KL :: CCDS11 KL >>CCDS82091.1 AKAP10 gene_id:11216|Hs108|chr17 (604 aa) initn: 3207 init1: 3207 opt: 3207 Z-score: 3604.8 bits: 677.2 E(32554): 1.8e-194 Smith-Waterman score: 3818; 91.2% identity (91.2% similar) in 662 aa overlap (1-662:1-604) 10 20 30 40 50 60 pF1KE2 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MRGAGPSPRQSPRTLRPDPGPAMSFFRRKVKGKEQEKTSDVKSIKASISVHSPQKSTKNH 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ALLEAAGPSHVAINAISANMDSFSSSRTATLKKQPSHMEAAHFGDLGRSCLDYQTQETKS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SLSKTLEQVLHDTIVLPYFIQFMELRRMEHLVKFWLEAESFHSTTWSRIRAHSLNTVKQS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SLAEPVSPSKKHETTASFLTDSLDKRLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 ECDSAHSLRLEMARAGTHQVSMETQESSSTLTVASRNSPASPLKELSGKLMKSIEQDAVN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 TFTKYISPDAAKPIPITEAMRNDIIARICGEDGQVDPNCFVLAQSIVFSAMEQEHFSEFL 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 RSHHFCKYQIEVLTSGTVYLADILFCESALFYFSEYMEKEDAVNILQFWLAADNFQSQLA 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 AKKGQYDGQEAQNDAMILYDKYFSLQATHPLGFDDVVRLEIESNICREGGPLPNCFTTPL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 RQAWTTMEKVFLPGFLSSNLYYKYLNDLIHSVRGDEFLGGNVSLTAPGSVGPPDESHPGS ::::::::: CCDS82 RQAWTTMEK--------------------------------------------------- 550 560 570 580 590 600 pF1KE2 SDSSASQSSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE ::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 -------SSVKKASIKILKNFDEAIIVDAASLDPESLYQRTYAGKMTFGRVSDLGQFIRE 490 500 510 520 530 540 610 620 630 640 650 660 pF1KE2 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 SEPEPDVRKSKGSMFSQAMKKWVQGNTDEAQEELAWKIAKMIVSDIMQQAQYDQPLEKST 550 560 570 580 590 600 pF1KE2 KL :: CCDS82 KL 662 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:06:19 2016 done: Mon Nov 7 01:06:19 2016 Total Scan time: 2.710 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]