FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6330, 390 aa 1>>>pF1KE6330 390 - 390 aa - 390 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.3346+/-0.00088; mu= -0.2135+/- 0.053 mean_var=237.4329+/-48.500, 0's: 0 Z-trim(114.7): 46 B-trim: 0 in 0/53 Lambda= 0.083235 statistics sampled from 15239 (15282) to 15239 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.785), E-opt: 0.2 (0.469), width: 16 Scan time: 2.370 The best scores are: opt bits E(32554) CCDS8453.1 ESAM gene_id:90952|Hs108|chr11 ( 390) 2596 324.2 1.3e-88 >>CCDS8453.1 ESAM gene_id:90952|Hs108|chr11 (390 aa) initn: 2596 init1: 2596 opt: 2596 Z-score: 1704.6 bits: 324.2 E(32554): 1.3e-88 Smith-Waterman score: 2596; 100.0% identity (100.0% similar) in 390 aa overlap (1-390:1-390) 10 20 30 40 50 60 pF1KE6 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 MISLPGPLVTNLLRFLFLGLSALAPPSRAQLQLHLPANRLQAVEGGEVVLPAWYTLHGEV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 SSSQPWEVPFVMWFFKQKEKEDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 SSSQPWEVPFVMWFFKQKEKEDQVLSYINGVTTSKPGVSLVYSMPSRNLSLRLEGLQEKD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 SGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 SGPYSCSVNVQDKQGKSRGHSIKTLELNVLVPPAPPSCRLQGVPHVGANVTLSCQSPRSK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 PAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 PAVQYQWDRQLPSFQTFFAPALDVIRGSLSLTNLSSSMAGVYVCKAHNEVGTAQCNVTLE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 VSTGPGAAVVAGAVVGTLVGLGLLAGLVLLYHRRGKALEEPANDIKEDAIAPRTLPWPKS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 SDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS84 SDTISKNGTLSSVTSARALRPPHGPPRPGALTPTPSLSSQALPSPRLPTTDGAHPQPISP 310 320 330 340 350 360 370 380 390 pF1KE6 IPGGVSSSGLSRMGAVPVMVPAQSQAGSLV :::::::::::::::::::::::::::::: CCDS84 IPGGVSSSGLSRMGAVPVMVPAQSQAGSLV 370 380 390 390 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 12:10:26 2016 done: Tue Nov 8 12:10:26 2016 Total Scan time: 2.370 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]