Result of FASTA (omim) for pFN21AE1346
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE1346, 255 aa
  1>>>pF1KE1346 255 - 255 aa - 255 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9739+/-0.00032; mu= 16.5566+/- 0.020
 mean_var=65.3071+/-13.306, 0's: 0 Z-trim(116.4): 298  B-trim: 0 in 0/55
 Lambda= 0.158706
 statistics sampled from 27196 (27512) to 27196 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.698), E-opt: 0.2 (0.323), width:  16
 Scan time:  7.080

The best scores are:                                      opt bits E(85289)
NP_001902 (OMIM: 116830) cathepsin G preproprotein ( 255) 1737 406.1 3.2e-113
XP_011534801 (OMIM: 116830) PREDICTED: cathepsin G ( 269) 1626 380.7 1.5e-105
NP_004122 (OMIM: 123910) granzyme B isoform 1 prep ( 247)  999 237.1 2.3e-62
NP_219491 (OMIM: 116831) granzyme H isoform 1 prep ( 246)  982 233.2 3.4e-61
NP_001332940 (OMIM: 123910) granzyme B isoform 2 [ ( 235)  927 220.6   2e-57
NP_001827 (OMIM: 118938) chymase isoform 1 preprop ( 247)  855 204.1 1.9e-52
XP_011534985 (OMIM: 116831) PREDICTED: granzyme H  ( 212)  817 195.4 7.2e-50
NP_001257709 (OMIM: 116831) granzyme H isoform 2 p ( 182)  555 135.3 7.3e-32
NP_002768 (OMIM: 177020) myeloblastin precursor [H ( 256)  550 134.3 2.1e-31
NP_001919 (OMIM: 134350,613912) complement factor  ( 253)  518 127.0 3.3e-29
NP_002760 (OMIM: 167800,276000,614044) trypsin-1 p ( 247)  515 126.3 5.3e-29
NP_001304264 (OMIM: 134350,613912) complement fact ( 260)  513 125.8 7.5e-29
XP_011514713 (OMIM: 167800,276000,614044) PREDICTE ( 472)  515 126.5 8.8e-29
NP_071329 (OMIM: 606135) kallikrein-14 preproprote ( 267)  508 124.7 1.7e-28
NP_001298111 (OMIM: 606135) kallikrein-14 prepropr ( 267)  508 124.7 1.7e-28
NP_001257710 (OMIM: 116831) granzyme H isoform 3 p ( 160)  505 123.8 1.8e-28
NP_006135 (OMIM: 140050) granzyme A precursor [Hom ( 262)  499 122.6   7e-28
NP_056411 (OMIM: 605505) kallikrein-13 precursor [ ( 277)  497 122.2   1e-27
NP_005308 (OMIM: 600311) granzyme M isoform 1 prep ( 257)  496 121.9 1.1e-27
NP_002762 (OMIM: 613578) trypsin-3 isoform 2 prepr ( 247)  488 120.1 3.8e-27
NP_001184027 (OMIM: 613578) trypsin-3 isoform 4 pr ( 240)  479 118.0 1.6e-26
NP_001184026 (OMIM: 613578) trypsin-3 isoform 3 pr ( 261)  479 118.0 1.7e-26
XP_011526078 (OMIM: 130130,162800,202700) PREDICTE ( 267)  479 118.0 1.7e-26
XP_011526077 (OMIM: 130130,162800,202700) PREDICTE ( 267)  479 118.0 1.7e-26
NP_001963 (OMIM: 130130,162800,202700) neutrophil  ( 267)  479 118.0 1.7e-26
NP_031369 (OMIM: 613578) trypsin-3 isoform 1 prepr ( 304)  479 118.1 1.9e-26
NP_009127 (OMIM: 605644) kallikrein-8 isoform 1 pr ( 260)  478 117.8   2e-26
NP_002761 (OMIM: 167800,601564) trypsin-2 isoform  ( 247)  476 117.3 2.6e-26
NP_004908 (OMIM: 204700,603767) kallikrein-4 isofo ( 254)  475 117.1 3.1e-26
NP_653088 (OMIM: 605644) kallikrein-8 isoform 2 pr ( 305)  474 116.9 4.2e-26
XP_011516267 (OMIM: 613578) PREDICTED: trypsin-3 i ( 333)  474 117.0 4.5e-26
NP_001012982 (OMIM: 602652) kallikrein-6 isoform A ( 244)  472 116.4 4.8e-26
NP_002765 (OMIM: 602652) kallikrein-6 isoform A pr ( 244)  472 116.4 4.8e-26
NP_005037 (OMIM: 604438) kallikrein-7 isoform 1 pr ( 253)  467 115.3 1.1e-25
NP_644806 (OMIM: 604438) kallikrein-7 isoform 1 pr ( 253)  467 115.3 1.1e-25
NP_006844 (OMIM: 604434) kallikrein-11 isoform 1 p ( 250)  452 111.8 1.2e-24
NP_001129504 (OMIM: 604434) kallikrein-11 isoform  ( 250)  452 111.8 1.2e-24
NP_659196 (OMIM: 604434) kallikrein-11 isoform 2 [ ( 282)  452 111.9 1.3e-24
NP_001691 (OMIM: 162815) azurocidin preproprotein  ( 251)  441 109.3 6.7e-24
XP_011526438 (OMIM: 177020) PREDICTED: myeloblasti ( 206)  438 108.6 9.3e-24
NP_001295012 (OMIM: 118938) chymase isoform 2 [Hom ( 136)  430 106.6 2.4e-23
NP_002095 (OMIM: 600784) granzyme K precursor [Hom ( 264)  419 104.3 2.3e-22
NP_665901 (OMIM: 605539) kallikrein-12 isoform 2 p ( 248)  414 103.1 4.8e-22
NP_036447 (OMIM: 605504) kallikrein-9 precursor [H ( 250)  414 103.1 4.9e-22
NP_001898 (OMIM: 118888) chymotrypsin-like proteas ( 264)  413 102.9   6e-22
NP_001897 (OMIM: 118890) chymotrypsinogen B isofor ( 263)  410 102.2 9.6e-22
NP_001070959 (OMIM: 605643) kallikrein-5 prepropro ( 293)  405 101.1 2.3e-21
NP_036559 (OMIM: 605643) kallikrein-5 preproprotei ( 293)  405 101.1 2.3e-21
XP_011525005 (OMIM: 605643) PREDICTED: kallikrein- ( 293)  405 101.1 2.3e-21
XP_011525004 (OMIM: 605643) PREDICTED: kallikrein- ( 293)  405 101.1 2.3e-21


>>NP_001902 (OMIM: 116830) cathepsin G preproprotein [Ho  (255 aa)
 initn: 1737 init1: 1737 opt: 1737  Z-score: 2153.6  bits: 406.1 E(85289): 3.2e-113
Smith-Waterman score: 1737; 100.0% identity (100.0% similar) in 255 aa overlap (1-255:1-255)

               10        20        30        40        50        60
pF1KE1 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYD
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE1 PRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRT
              190       200       210       220       230       240

              250     
pF1KE1 TMRSFKLLDQMETPL
       :::::::::::::::
NP_001 TMRSFKLLDQMETPL
              250     

>>XP_011534801 (OMIM: 116830) PREDICTED: cathepsin G iso  (269 aa)
 initn: 1626 init1: 1626 opt: 1626  Z-score: 2016.0  bits: 380.7 E(85289): 1.5e-105
Smith-Waterman score: 1699; 94.8% identity (94.8% similar) in 269 aa overlap (1-255:1-269)

               10                      20        30        40      
pF1KE1 MQPLLLLLAFLLPTGAEAG--------------EIIGGRESRPHSRPYMAYLQIQSPAGQ
       :::::::::::::::::::              :::::::::::::::::::::::::::
XP_011 MQPLLLLLAFLLPTGAEAGSASIELSAKCFLPGEIIGGRESRPHSRPYMAYLQIQSPAGQ
               10        20        30        40        50        60

         50        60        70        80        90       100      
pF1KE1 SRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQ
               70        80        90       100       110       120

        110       120       130       140       150       160      
pF1KE1 NDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 NDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRV
              130       140       150       160       170       180

        170       180       190       200       210       220      
pF1KE1 QRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPE
              190       200       210       220       230       240

        230       240       250     
pF1KE1 VFTRVSSFLPWIRTTMRSFKLLDQMETPL
       :::::::::::::::::::::::::::::
XP_011 VFTRVSSFLPWIRTTMRSFKLLDQMETPL
              250       260         

>>NP_004122 (OMIM: 123910) granzyme B isoform 1 prepropr  (247 aa)
 initn: 1041 init1: 669 opt: 999  Z-score: 1240.6  bits: 237.1 E(85289): 2.3e-62
Smith-Waterman score: 999; 57.4% identity (82.7% similar) in 249 aa overlap (1-245:1-247)

               10        20        30        40        50        60
pF1KE1 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
       :::.::::::::   :.:::::::.:..::::::::::.: .  . .::::::.:.::::
NP_004 MQPILLLLAFLLLPRADAGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
       ::::::::.::::::::::...: ::: : ..: : :: :: ....:::::::: :...:
NP_004 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
               70        80        90       100       110       120

              130       140       150        160       170         
pF1KE1 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQC---LRIF
       .: :.:. ::  .  ..::  :.:::::... . . . ::.::.. ::.::.:   :: .
NP_004 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KE1 GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLP
         ::   ..:::: . .:..:::::::::.::.::.::::::...:.::.. :.::::. 
NP_004 --YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVH
                190       200       210       220       230        

        240       250     
pF1KE1 WIRTTMRSFKLLDQMETPL
       ::. ::. .          
NP_004 WIKKTMKRY          
      240                 

>>NP_219491 (OMIM: 116831) granzyme H isoform 1 prepropr  (246 aa)
 initn: 967 init1: 707 opt: 982  Z-score: 1219.6  bits: 233.2 E(85289): 3.4e-61
Smith-Waterman score: 982; 57.8% identity (82.0% similar) in 244 aa overlap (1-243:1-244)

               10        20        30        40        50        60
pF1KE1 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
       :::.::::::::  :: . :::::.:..::::::::..:. .  ...::::.:::.::::
NP_219 MQPFLLLLAFLLTPGAGTEEIIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
       ::::: ::.::::::::::...: ::: : ..: : :: :: ....:::::::: :... 
NP_219 TAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKW
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KE1 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIF-GSY
       .  : :. :: ..  ..:: ::.::::: :::   . ::.:: : ::.: :: :.: :.:
NP_219 TTAVRPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNY
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE1 DPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIR
       .   .::::: .. ...:::::::::.:..::.::.:::...:.:: :. .:: :::::.
NP_219 SRATEICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIK
              190       200       210       220       230       240

     240       250     
pF1KE1 TTMRSFKLLDQMETPL
        ::.            
NP_219 RTMKRL          
                       

>>NP_001332940 (OMIM: 123910) granzyme B isoform 2 [Homo  (235 aa)
 initn: 926 init1: 596 opt: 927  Z-score: 1151.8  bits: 220.6 E(85289): 2e-57
Smith-Waterman score: 927; 56.0% identity (82.8% similar) in 232 aa overlap (18-245:6-235)

               10        20        30        40        50        60
pF1KE1 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
                        .::::::.:..::::::::::.: .  . .::::::.:.::::
NP_001             MQTFPSGEIIGGHEAKPHSRPYMAYLMIWDQKSLKRCGGFLIRDDFVL
                           10        20        30        40        

               70        80        90       100       110       120
pF1KE1 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
       ::::::::.::::::::::...: ::: : ..: : :: :: ....:::::::: :...:
NP_001 TAAHCWGSSINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKR
       50        60        70        80        90       100        

              130       140       150        160       170         
pF1KE1 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQC---LRIF
       .: :.:. ::  .  ..::  :.:::::... . . . ::.::.. ::.::.:   :: .
NP_001 TRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHY
      110       120       130       140       150       160        

        180       190       200       210       220       230      
pF1KE1 GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLP
         ::   ..:::: . .:..:::::::::.::.::.::::::...:.::.. :.::::. 
NP_001 --YDSTIELCVGDPEIKKTSFKGDSGGPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVH
        170       180       190       200       210       220      

        240       250     
pF1KE1 WIRTTMRSFKLLDQMETPL
       ::. ::. .          
NP_001 WIKKTMKRY          
        230               

>>NP_001827 (OMIM: 118938) chymase isoform 1 preproprote  (247 aa)
 initn: 843 init1: 621 opt: 855  Z-score: 1062.4  bits: 204.1 E(85289): 1.9e-52
Smith-Waterman score: 855; 52.4% identity (77.6% similar) in 246 aa overlap (1-244:3-246)

                 10        20        30        40         50       
pF1KE1   MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSR-CGGFLVRED
         . :: ::: ::: . ::::::::: : .::::::::::.: .  : :. :::::.:..
NP_001 MLLLPLPLLL-FLLCSRAEAGEIIGGTECKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRN
               10         20        30        40        50         

        60        70        80        90       100       110       
pF1KE1 FVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRR
       :::::::: : .:.:::::::: ..:.: :.. . . .:::.::  :...:::::.:...
NP_001 FVLTAAHCAGRSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEK
      60        70        80        90       100       110         

       120       130       140       150        160       170      
pF1KE1 VRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVS-MRRGTDTLREVQLRVQRDRQCLRIF
       .  .  :. . .:   . . :: .: ::::::.. .. :.:::.::.::..  . : . :
NP_001 ASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSH-F
     120       130       140       150       160       170         

        180       190       200       210       220       230      
pF1KE1 GSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLP
        ..:   :.:::. :. :.:::::::::::: .::.::::::.:.. :: ::::.: . :
NP_001 RDFDHNLQLCVGNPRKTKSAFKGDSGGPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRP
      180       190       200       210       220       230        

        240       250     
pF1KE1 WIRTTMRSFKLLDQMETPL
       ::   ...           
NP_001 WINQILQAN          
      240                 

>>XP_011534985 (OMIM: 116831) PREDICTED: granzyme H isof  (212 aa)
 initn: 802 init1: 542 opt: 817  Z-score: 1016.3  bits: 195.4 E(85289): 7.2e-50
Smith-Waterman score: 817; 55.2% identity (81.0% similar) in 210 aa overlap (35-243:1-210)

           10        20        30        40        50        60    
pF1KE1 LLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAH
                                     ::..:. .  ...::::.:::.::::::::
XP_011                               MAFVQFLQEKSRKRCGGILVRKDFVLTAAH
                                             10        20        30

           70        80        90       100       110       120    
pF1KE1 CWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNV
       : ::.::::::::::...: ::: : ..: : :: :: ....:::::::: :... .  :
XP_011 CQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKWTTAV
               40        50        60        70        80        90

          130       140       150       160       170        180   
pF1KE1 NPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIF-GSYDPRR
        :. :: ..  ..:: ::.::::: :::   . ::.:: : ::.: :: :.: :.:.   
XP_011 RPLRLPSSKAQVKPGQLCSVAGWGYVSMSTLATTLQEVLLTVQKDCQCERLFHGNYSRAT
              100       110       120       130       140       150

           190       200       210       220       230       240   
pF1KE1 QICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMR
       .::::: .. ...:::::::::.:..::.::.:::...:.:: :. .:: :::::. ::.
XP_011 EICVGDPKKTQTGFKGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIKRTMK
              160       170       180       190       200       210

           250     
pF1KE1 SFKLLDQMETPL
                   
XP_011 RL          
                   

>>NP_001257709 (OMIM: 116831) granzyme H isoform 2 precu  (182 aa)
 initn: 747 init1: 542 opt: 555  Z-score: 693.1  bits: 135.3 E(85289): 7.3e-32
Smith-Waterman score: 626; 44.4% identity (63.0% similar) in 243 aa overlap (1-243:1-180)

               10        20        30        40        50        60
pF1KE1 MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVL
       :::.::::::::  :: . :::::.:..::::::::..:. .  ...::::.:::.::::
NP_001 MQPFLLLLAFLLTPGAGTEEIIGGHEAKPHSRPYMAFVQFLQEKSRKRCGGILVRKDFVL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE1 TAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRR
       ::::: ::.::::::::::...: ::: : ..: : :: :: ....:::::::: :... 
NP_001 TAAHCQGSSINVTLGAHNIKEQERTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKW
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE1 NRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYD
       .  : :. :: ..                                               
NP_001 TTAVRPLRLPSSKA----------------------------------------------
              130                                                  

              190       200       210       220       230       240
pF1KE1 PRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRT
                        .:::::::.:..::.::.:::...:.:: :. .:: :::::. 
NP_001 -----------------QGDSGGPLVCKDVAQGILSYGNKKGTPPGVYIKVSHFLPWIKR
                           140       150       160       170       

              250     
pF1KE1 TMRSFKLLDQMETPL
       ::.            
NP_001 TMKRL          
       180            

>>NP_002768 (OMIM: 177020) myeloblastin precursor [Homo   (256 aa)
 initn: 586 init1: 240 opt: 550  Z-score: 684.8  bits: 134.3 E(85289): 2.1e-31
Smith-Waterman score: 550; 39.0% identity (69.9% similar) in 246 aa overlap (6-243:13-248)

                      10        20        30        40        50   
pF1KE1        MQPLLLLLAFLLPTGAEAGEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFL
                   .:::.::  .:.:.::.::.:..:::::::: ::...  :.  ::: :
NP_002 MAHRPPSPALASVLLALLLSGAARAAEIVGGHEAQPHSRPYMASLQMRGNPGSHFCGGTL
               10        20        30        40        50        60

            60            70        80        90       100         
pF1KE1 VREDFVLTAAHCWGSN----INVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDI
       .. .::::::::  .     .::.:::::.. .: ::::... ... . .:. ..  ::.
NP_002 IHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLN-NYDAENKLNDV
               70        80        90       100        110         

     110       120       130       140       150        160        
pF1KE1 MLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRG-TDTLREVQLRVQR
       .:.:::  .  . .:  : ::. .. .  :: : . :::::. .   ...:.:... :  
NP_002 LLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTV--
     120       130       140       150       160       170         

      170       180       190       200       210          220     
pF1KE1 DRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSY---GKSSGVPP
           . .:    :. .::.   :.. .   :::::::.:... .:: :.   : .. . :
NP_002 ----VTFFCR--PH-NICTFVPRRKAGICFGDSGGPLICDGIIQGIDSFVIWGCATRLFP
           180          190       200       210       220       230

         230       240       250     
pF1KE1 EVFTRVSSFLPWIRTTMRSFKLLDQMETPL
       . ::::. .. :::.:.:            
NP_002 DFFTRVALYVDWIRSTLRRVEAKGRP    
              240       250          

>>NP_001919 (OMIM: 134350,613912) complement factor D is  (253 aa)
 initn: 513 init1: 211 opt: 518  Z-score: 645.3  bits: 127.0 E(85289): 3.3e-29
Smith-Waterman score: 518; 38.1% identity (65.1% similar) in 252 aa overlap (8-242:7-252)

               10              20        30        40        50    
pF1KE1 MQPLLLLLAFLLPTGAEA------GEIIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLV
              :: :.  :: :      :.:.::::.. :.::::: .:..   :   ::: ::
NP_001  MHSWERLAVLVLLGAAACAAPPRGRILGGREAEAHARPYMASVQLN---GAHLCGGVLV
                10        20        30        40           50      

           60            70        80        90       100       110
pF1KE1 REDFVLTAAHCW----GSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIM
        :..::.::::      ....: ::::.... : ...   . ::. ::. .  ::..:..
NP_001 AEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLL
         60        70        80        90       100       110      

              120       130       140       150        160         
pF1KE1 LLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMR-RGTDTLREVQLRVQRD
       :::::...  .  : :.   :... . ::::: ::::: :.   :  :.:..: : :   
NP_001 LLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDR
        120       130       140       150       160       170      

     170       180          190       200       210          220   
pF1KE1 RQCLRIFGSYD---PRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGK---SSGV
         : :    .:    .: .:.  . .:. . ::::::::.:..: .:.:. :.   ..  
NP_001 ATCNR-RTHHDGAITERLMCA--ESNRRDSCKGDSGGPLVCGGVLEGVVTSGSRVCGNRK
        180        190         200       210       220       230   

           230       240       250     
pF1KE1 PPEVFTRVSSFLPWIRTTMRSFKLLDQMETPL
        : ..:::.:.  :: ...             
NP_001 KPGIYTRVASYAAWIDSVLA            
           240       250               




255 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 01:24:24 2016 done: Mon Nov  7 01:24:25 2016
 Total Scan time:  7.080 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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