FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4568, 721 aa 1>>>pF1KE4568 721 - 721 aa - 721 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4466+/-0.000798; mu= 16.2664+/- 0.049 mean_var=111.2241+/-22.479, 0's: 0 Z-trim(110.7): 21 B-trim: 0 in 0/52 Lambda= 0.121612 statistics sampled from 11769 (11789) to 11769 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.706), E-opt: 0.2 (0.362), width: 16 Scan time: 4.400 The best scores are: opt bits E(32554) CCDS3252.1 EIF2B5 gene_id:8893|Hs108|chr3 ( 721) 4776 848.9 0 >>CCDS3252.1 EIF2B5 gene_id:8893|Hs108|chr3 (721 aa) initn: 4776 init1: 4776 opt: 4776 Z-score: 4530.9 bits: 848.9 E(32554): 0 Smith-Waterman score: 4776; 99.9% identity (100.0% similar) in 721 aa overlap (1-721:1-721) 10 20 30 40 50 60 pF1KE4 MAAPVVAPPGVVVSRANKRSGAGPGGSGGGGARGAEEEPPPPLQAVLVADSFDRRFFPIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MAAPVVAPPGVVVSRANKRSGAGPGGSGGGGARGAEEEPPPPLQAVLVADSFDRRFFPIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNVV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 RIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVSV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 MTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVLHFQKTQGLRRFAFPLSLFQGSSDGVEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 MTMIFKESSPSHPTRCHEDNVVVAVDSTTNRVLHFQKTQGLRRFAFPLSLFQGSSDGVEV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 RYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEEILGNQIHMHVTAKEYGARV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 RYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEEILGNQIHMHVTAKEYGARV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 SNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYRGPEVSLGHGSILEENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 SNLHMYSAVCADVIRRWVYPLTPEANFTDSTTQSCTHSRHNIYRGPEVSLGHGSILEENV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 LLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLLCDNAEVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LLGSGTVIGSNCFITNSVIGPGCHIGDNVVLDQTYLWQGVRVAAGAQIHQSLLCDNAEVK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 ERVTLKPRSVLTSQVVVGPNITLPEGSVISLHPPDAEEDEDDGEFSDDSGADQEKDKVKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ERVTLKPRSVLTSQVVVGPNITLPEGSVISLHPPDAEEDEDDGEFSDDSGADQEKDKVKM 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 KGYNPAEVGAAGKGYLWKAAGMNMEEEEELQQNLWGLKINMEEESESESEQSMDSEEPDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 KGYNPAEVGAAGKGYLWKAAGMNMEEEEELQQNLWGLKINMEEESESESEQSMDSEEPDS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 RGGSPQMDDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNVSLKEVMQVLSHVV ::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: CCDS32 RGGSPQMDDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVMQVLSHVV 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE4 LEFPLQQMDSPLDSSRYCALLLPLLKAWSPVFRNYIKRAADHLEALAAIEDFFLEHEALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 LEFPLQQMDSPLDSSRYCALLLPLLKAWSPVFRNYIKRAADHLEALAAIEDFFLEHEALG 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE4 ISMAKVLMAFYQLEILAEETILSWFSQRDTTDKGQQLRKNQQLQRFIQWLKEAEEESSED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS32 ISMAKVLMAFYQLEILAEETILSWFSQRDTTDKGQQLRKNQQLQRFIQWLKEAEEESSED 670 680 690 700 710 720 pF1KE4 D : CCDS32 D 721 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 23:52:14 2016 done: Sat Nov 5 23:52:14 2016 Total Scan time: 4.400 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]