FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1484, 655 aa 1>>>pF1KE1484 655 - 655 aa - 655 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.4091+/-0.00113; mu= -2.4415+/- 0.068 mean_var=323.3238+/-66.357, 0's: 0 Z-trim(112.8): 120 B-trim: 135 in 2/52 Lambda= 0.071327 statistics sampled from 13382 (13499) to 13382 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.415), width: 16 Scan time: 4.380 The best scores are: opt bits E(32554) CCDS11845.1 RALBP1 gene_id:10928|Hs108|chr18 ( 655) 4275 454.0 2.9e-127 >>CCDS11845.1 RALBP1 gene_id:10928|Hs108|chr18 (655 aa) initn: 4275 init1: 4275 opt: 4275 Z-score: 2398.2 bits: 454.0 E(32554): 2.9e-127 Smith-Waterman score: 4275; 100.0% identity (100.0% similar) in 655 aa overlap (1-655:1-655) 10 20 30 40 50 60 pF1KE1 MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 VSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 IDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKV 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DELKAAYDREESTNLEDYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FTHVQELFGNVVLKQVMKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGI 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 KDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVIN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAK 550 560 570 580 590 600 610 620 630 640 650 pF1KE1 AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 AEQQAQEDEEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI 610 620 630 640 650 655 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:36:00 2016 done: Mon Nov 7 01:36:00 2016 Total Scan time: 4.380 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]