FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1123, 456 aa 1>>>pF1KE1123 456 - 456 aa - 456 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.7655+/-0.000484; mu= 15.7932+/- 0.030 mean_var=93.6224+/-18.498, 0's: 0 Z-trim(110.1): 107 B-trim: 68 in 1/49 Lambda= 0.132551 statistics sampled from 18285 (18384) to 18285 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.571), E-opt: 0.2 (0.216), width: 16 Scan time: 8.680 The best scores are: opt bits E(85289) NP_003698 (OMIM: 603449) ruvB-like 1 isoform 1 [Ho ( 456) 2903 566.1 6.9e-161 XP_016862845 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 467) 2592 506.6 5.6e-143 XP_005247898 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 396) 2536 495.9 8.3e-140 NP_001306013 (OMIM: 603449) ruvB-like 1 isoform 2 ( 386) 2405 470.8 2.8e-132 XP_011511551 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 375) 2401 470.0 4.7e-132 XP_016862846 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 407) 2225 436.4 6.8e-122 XP_011511550 (OMIM: 603449) PREDICTED: ruvB-like 1 ( 393) 2172 426.2 7.4e-119 NP_001306015 (OMIM: 603449) ruvB-like 1 isoform 3 ( 315) 2034 399.8 5.5e-111 NP_006657 (OMIM: 604788) ruvB-like 2 isoform 1 [Ho ( 463) 747 153.8 9.1e-37 NP_001308119 (OMIM: 604788) ruvB-like 2 isoform 2 ( 429) 639 133.1 1.4e-30 XP_011524632 (OMIM: 604788) PREDICTED: ruvB-like 2 ( 418) 618 129.1 2.2e-29 NP_001308120 (OMIM: 604788) ruvB-like 2 isoform 3 ( 418) 618 129.1 2.2e-29 >>NP_003698 (OMIM: 603449) ruvB-like 1 isoform 1 [Homo s (456 aa) initn: 2903 init1: 2903 opt: 2903 Z-score: 3009.4 bits: 566.1 E(85289): 6.9e-161 Smith-Waterman score: 2903; 100.0% identity (100.0% similar) in 456 aa overlap (1-456:1-456) 10 20 30 40 50 60 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_003 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN 370 380 390 400 410 420 430 440 450 pF1KE1 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK :::::::::::::::::::::::::::::::::::: NP_003 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK 430 440 450 >>XP_016862845 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (467 aa) initn: 2582 init1: 2582 opt: 2592 Z-score: 2687.8 bits: 506.6 E(85289): 5.6e-143 Smith-Waterman score: 2592; 92.4% identity (95.1% similar) in 446 aa overlap (1-446:1-440) 10 20 30 40 50 60 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN :::::::::::::::::::::::::::::::::::::::::::: .. :.:... XP_016 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRSHDSM----NMLVQLI 370 380 390 400 410 430 440 450 pF1KE1 GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK : . : :. : :: .. .. XP_016 WKPAAFKYHL--IVSTQYDDSAPHRVGDCTQGILKLKSRPWKLPGVGSGHTWK 420 430 440 450 460 >>XP_005247898 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (396 aa) initn: 2536 init1: 2536 opt: 2536 Z-score: 2631.0 bits: 495.9 E(85289): 8.3e-140 Smith-Waterman score: 2536; 100.0% identity (100.0% similar) in 396 aa overlap (61-456:1-396) 40 50 60 70 80 90 pF1KE1 LAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK :::::::::::::::::::::::::::::: XP_005 MAGRAVLLAGPPGTGKTALALAIAQELGSK 10 20 30 100 110 120 130 140 150 pF1KE1 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEA 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE1 LNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ 340 350 360 370 380 390 pF1KE1 QDKYMK :::::: XP_005 QDKYMK >>NP_001306013 (OMIM: 603449) ruvB-like 1 isoform 2 [Hom (386 aa) initn: 2405 init1: 2405 opt: 2405 Z-score: 2495.7 bits: 470.8 E(85289): 2.8e-132 Smith-Waterman score: 2405; 98.7% identity (99.5% similar) in 379 aa overlap (1-379:1-379) 10 20 30 40 50 60 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN :::::::::::::... : NP_001 IRTMLYTPQEMKQVLSAAADPGQLAC 370 380 >>XP_011511551 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (375 aa) initn: 2401 init1: 2401 opt: 2401 Z-score: 2491.8 bits: 470.0 E(85289): 4.7e-132 Smith-Waterman score: 2401; 99.7% identity (100.0% similar) in 374 aa overlap (1-374:1-374) 10 20 30 40 50 60 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN :::::::::::::. XP_011 IRTMLYTPQEMKQVP 370 >>XP_016862846 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (407 aa) initn: 2215 init1: 2215 opt: 2225 Z-score: 2309.4 bits: 436.4 E(85289): 6.8e-122 Smith-Waterman score: 2225; 91.2% identity (94.3% similar) in 386 aa overlap (61-446:1-380) 40 50 60 70 80 90 pF1KE1 LAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK :::::::::::::::::::::::::::::: XP_016 MAGRAVLLAGPPGTGKTALALAIAQELGSK 10 20 30 100 110 120 130 140 150 pF1KE1 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEA 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE1 LNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ :::::::::::::: .. :.:... : . : :. : :: .. .. XP_016 LNHLGEIGTKTTLRSHDSM----NMLVQLIWKPAAFKYHL--IVSTQYDDSAPHRVGDCT 340 350 360 370 380 pF1KE1 QDKYMK XP_016 QGILKLKSRPWKLPGVGSGHTWK 390 400 >>XP_011511550 (OMIM: 603449) PREDICTED: ruvB-like 1 iso (393 aa) initn: 2172 init1: 2172 opt: 2172 Z-score: 2254.8 bits: 426.2 E(85289): 7.4e-119 Smith-Waterman score: 2172; 100.0% identity (100.0% similar) in 339 aa overlap (1-339:1-339) 10 20 30 40 50 60 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI ::::::::::::::::::::::::::::::::::::::: XP_011 VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRYAVLDSKEIWVCGFIAPNCLS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN XP_011 GGSSLMAEFGQLLNEALRTSHPLTASLLTFWTE 370 380 390 >>NP_001306015 (OMIM: 603449) ruvB-like 1 isoform 3 [Hom (315 aa) initn: 2034 init1: 2034 opt: 2034 Z-score: 2113.5 bits: 399.8 E(85289): 5.5e-111 Smith-Waterman score: 2034; 99.7% identity (100.0% similar) in 314 aa overlap (61-374:1-314) 40 50 60 70 80 90 pF1KE1 LAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSK :::::::::::::::::::::::::::::: NP_001 MAGRAVLLAGPPGTGKTALALAIAQELGSK 10 20 30 100 110 120 130 140 150 pF1KE1 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGY 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYA 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTE 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFA 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEA :::::::::::::::::::::::::::::::::::::::::::. NP_001 SNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQVP 280 290 300 310 400 410 420 430 440 450 pF1KE1 LNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQ >>NP_006657 (OMIM: 604788) ruvB-like 2 isoform 1 [Homo s (463 aa) initn: 1229 init1: 483 opt: 747 Z-score: 781.1 bits: 153.8 E(85289): 9.1e-37 Smith-Waterman score: 1267; 43.0% identity (73.9% similar) in 456 aa overlap (2-455:9-451) 10 20 30 40 50 pF1KE1 MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIV :. :....:. .::..:::..:::::.. .::..:.::: ::.: ::.. NP_006 MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE1 ELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLM :.:. :.::::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: NP_006 EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE1 ENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLD . :::.::.:::: :. ::::.:. . . : : :. ... . :::.. : NP_006 QAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVGK--LTLKTTEMETIYDLG 130 140 150 160 170 180 190 200 210 220 230 pF1KE1 PSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKK ...::: :..:.::::: :. .: ... :: : : ..: . . .: : :...:. NP_006 TKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKR 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE1 KEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGI ::... :.::..:: :.: :: .:. :.. :: ...: .:: : .. ..: NP_006 KEVVHTVSLHEIDVINSRTQG---FLA----LFSGDTGEIKSEVREQINAKVAEWREEGK 240 250 260 270 280 300 310 320 330 340 350 pF1KE1 AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIP ::..:::::.::::::::: :..:.:::::..::..:.:.::: :::: . :::::: NP_006 AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIP 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE1 LDLLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLT .:::::..:. : :. .. :::..:: . : ...::.: . : .:: .:.:::..::.: NP_006 IDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLIT 350 360 370 380 390 400 420 430 440 450 pF1KE1 PANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK :.:. . .. . .... :: : . :.. . . :: .. NP_006 AASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS 410 420 430 440 450 460 >>NP_001308119 (OMIM: 604788) ruvB-like 2 isoform 2 [Hom (429 aa) initn: 1152 init1: 406 opt: 639 Z-score: 669.9 bits: 133.1 E(85289): 1.4e-30 Smith-Waterman score: 1159; 43.2% identity (73.1% similar) in 424 aa overlap (34-455:7-417) 10 20 30 40 50 60 pF1KE1 EEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAG ::..:.::: ::.: ::..:.:. :.:: NP_001 MCASHPQASQGMVGQLAARRAAGVVLEMIREGKIAG 10 20 30 70 80 90 100 110 120 pF1KE1 RAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLR ::::.:: :::::::.:...:: :: .:: ..:::..: :..:::.: . :::.::.: NP_001 RAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVR 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 IKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKE ::: :. ::::.:. . . : : :. .... :::.. : ...::: :. NP_001 IKEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLTKD 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE1 RVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLH .:.::::: :. .: ... :: : : ..: . . .: : :...:.::... :.:: NP_001 KVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLH 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE1 DLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFV ..:: :.: :: .:. :.. :: ...: .:: : .. ..: ::..:::::. NP_001 EIDVINSRTQG---FLA----LFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFI 220 230 240 250 260 310 320 330 340 350 360 pF1KE1 DEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMII ::::::::: :..:.:::::..::..:.:.::: :::: . ::::::.:::::..:. NP_001 DEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIV 270 280 290 300 310 320 370 380 390 400 410 420 pF1KE1 RTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKING : :. .. :::..:: . : ...::.: . : .:: .:.:::..::.: :.:. . NP_001 STTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRK 330 340 350 360 370 380 430 440 450 pF1KE1 KDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK .. . .... :: : . :.. . . :: .. NP_001 GTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS 390 400 410 420 456 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:38:39 2016 done: Mon Nov 7 01:38:40 2016 Total Scan time: 8.680 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]