FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1419, 277 aa 1>>>pF1KE1419 277 - 277 aa - 277 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3415+/-0.00086; mu= 11.5091+/- 0.052 mean_var=131.6929+/-25.560, 0's: 0 Z-trim(112.2): 49 B-trim: 25 in 1/50 Lambda= 0.111762 statistics sampled from 12961 (13010) to 12961 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.4), width: 16 Scan time: 2.440 The best scores are: opt bits E(32554) CCDS13393.1 CD40 gene_id:958|Hs108|chr20 ( 277) 1987 331.2 5.1e-91 CCDS13394.1 CD40 gene_id:958|Hs108|chr20 ( 203) 1246 211.5 3.8e-55 CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 263) 548 99.1 3.5e-21 CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 337) 548 99.2 4.1e-21 CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 616) 548 99.5 6.3e-21 CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 ( 299) 537 97.4 1.3e-20 CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 ( 461) 429 80.2 3.1e-15 CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 ( 416) 412 77.4 1.9e-14 CCDS8544.1 LTBR gene_id:4055|Hs108|chr12 ( 435) 412 77.4 2e-14 CCDS44046.1 TNFRSF14 gene_id:8764|Hs108|chr1 ( 283) 381 72.2 4.6e-13 CCDS6326.1 TNFRSF11B gene_id:4982|Hs108|chr8 ( 401) 370 70.6 2e-12 >>CCDS13393.1 CD40 gene_id:958|Hs108|chr20 (277 aa) initn: 1987 init1: 1987 opt: 1987 Z-score: 1747.5 bits: 331.2 E(32554): 5.1e-91 Smith-Waterman score: 1987; 100.0% identity (100.0% similar) in 277 aa overlap (1-277:1-277) 10 20 30 40 50 60 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD 190 200 210 220 230 240 250 260 270 pF1KE1 DLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ ::::::::::::::::::::::::::::::::::::: CCDS13 DLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ 250 260 270 >>CCDS13394.1 CD40 gene_id:958|Hs108|chr20 (203 aa) initn: 1243 init1: 1243 opt: 1246 Z-score: 1103.5 bits: 211.5 E(32554): 3.8e-55 Smith-Waterman score: 1246; 89.9% identity (91.0% similar) in 188 aa overlap (1-188:1-188) 10 20 30 40 50 60 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSDCTEFTETECL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS13 PCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHCTSEACESCV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETKDLVVQQAGTN ::::::::::::::::::::::::::::::::::::::::::::: . . CCDS13 LHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTRSPGSAESPGGDPHH 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAKKPTNKAPHPKQEPQEINFPD : :: : CCDS13 LRDPVCHPLGAGLYQKGGQEANQ 190 200 >>CCDS74227.1 TNFRSF11A gene_id:8792|Hs108|chr18 (263 aa) initn: 525 init1: 287 opt: 548 Z-score: 493.9 bits: 99.1 E(32554): 3.5e-21 Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241) 10 20 30 40 50 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD : : :.: . : .:.. :: . ::.: ..::. :.::. . : CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH :: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.: CCDS74 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK :. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.: CCDS74 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT :.. ::.:.:.::. . : : .: .:. .::: . :: ..: : . CCDS74 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK 180 190 200 210 220 230 230 240 250 260 270 pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ .:: CCDS74 GKALTANLWHWINEACGRLSGDKEM 240 250 260 >>CCDS74228.1 TNFRSF11A gene_id:8792|Hs108|chr18 (337 aa) initn: 525 init1: 287 opt: 548 Z-score: 492.5 bits: 99.2 E(32554): 4.1e-21 Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241) 10 20 30 40 50 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD : : :.: . : .:.. :: . ::.: ..::. :.::. . : CCDS74 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH :: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.: CCDS74 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK :. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.: CCDS74 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT :.. ::.:.:.::. . : : .: .:. .::: . :: ..: : . CCDS74 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK 180 190 200 210 220 230 230 240 250 260 270 pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ .:: CCDS74 GKALTGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQTSQEGAAAAAEPMGRPVQEETLAR 240 250 260 270 280 290 >>CCDS11980.1 TNFRSF11A gene_id:8792|Hs108|chr18 (616 aa) initn: 525 init1: 287 opt: 548 Z-score: 489.2 bits: 99.5 E(32554): 6.3e-21 Smith-Waterman score: 548; 37.4% identity (63.9% similar) in 230 aa overlap (4-226:14-241) 10 20 30 40 50 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINSQCCSLCQPGQKLVSD : : :.: . : .:.. :: . ::.: ..::. :.::. . : CCDS11 MAPRARRRRPLFALLLLCALLARLQVALQIAPPCTS-EKHYEHLGRCCNKCEPGKYMSSK 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 CTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWH :: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :.: CCDS11 CTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGYH 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE1 CTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCETK :. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.: CCDS11 -WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTFL 120 130 140 150 160 170 180 190 200 210 220 pF1KE1 DLVVQQAGTNKTDVVCGPQDRLRA-----LVVIP-IIFGILFA-ILLVLVFIKKVAKKPT :.. ::.:.:.::. . : : .: .:. .::: . :: ..: : . CCDS11 GKRVEHHGTEKSDAVCSSSLPARKPPNEPHVYLPGLIILLLFASVALVAAIIFGVCYRKK 180 190 200 210 220 230 230 240 250 260 270 pF1KE1 NKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ .:: CCDS11 GKALTANLWHWINEACGRLSGDKESSGDSCVSTHTANFGQQGACEGVLLLTLEEKTFPED 240 250 260 270 280 290 >>CCDS59324.1 TNFRSF11A gene_id:8792|Hs108|chr18 (299 aa) initn: 516 init1: 287 opt: 537 Z-score: 483.6 bits: 97.4 E(32554): 1.3e-20 Smith-Waterman score: 539; 31.1% identity (60.6% similar) in 289 aa overlap (4-269:14-299) 10 20 30 40 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACR-EKQYLINSQCCSLCQPGQKLVS : : :.: . : .:.. :: : ::.: ..::. :.::. . : CCDS59 MAPRARRRRPLFALLLLCALLARLQVALQIAPP--CTSEKHYEHLGRCCNKCEPGKYMSS 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 DCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGW :: ... ::::: .:.::.::.: .: :: :: . .: . :.: : :.: :. CCDS59 KCTTTSDSVCLPCGPDEYLDSWNEEDKCLLHKVCDTGKALVAVVAGNSTTPRRCACTAGY 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 HCTSEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCET : :. :: : . :.::.:... .::.:.:: .:.::.. :. .::.:::.: CCDS59 H-WSQDCECCRRNTECAPGLGAQHPLQLNKDTVCKPCLAGYFSDAFSSTDKCRPWTNCTF 120 130 140 150 160 170 170 180 190 200 210 pF1KE1 KDLVVQQAGTNKTDVVCG--------PQDRLRALVVIPIIFG---ILFAILLVLVFIKKV :.. ::.:.:.::. :. . . .: . . : ...:..... CCDS59 LGKRVEHHGTEKSDAVCSSSLPARKPPNGNVTGNSNSTFISSGQVMNFKGDIIVVYVSQT 180 190 200 210 220 230 220 230 240 250 260 pF1KE1 AKKPTNKAPHPKQEP-QEINFP--DDLPGSNTAAP--------VQETLHGCQPVTQEDGK ... . : .: .: :: .. :.. :.. : ..: .. .:: .. : CCDS59 SQEGAAAAAEPMGRPVQEETLARRDSFAGNGPRFPDPCGGPEGLREPEKASRPVQEQGGA 240 250 260 270 280 290 270 pF1KE1 ESRISVQERQ .. CCDS59 KA >>CCDS145.1 TNFRSF1B gene_id:7133|Hs108|chr1 (461 aa) initn: 340 init1: 167 opt: 429 Z-score: 387.1 bits: 80.2 E(32554): 3.1e-15 Smith-Waterman score: 429; 35.1% identity (61.7% similar) in 188 aa overlap (15-195:29-209) 10 20 30 40 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTACREKQYLINS--QCCSLCQPG .: ::: ..:: ..: .. .::: :.:: CCDS14 MAPVAVWAALAVGLELWAAAHALPAQVAFTPYAPEPGSTCRLREYYDQTAQMCCSKCSPG 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE1 QKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQ-HKYCDPNLGLRVQ-QKGTSETDTI :. ::. ..: : : .: . . :: .: . . :. . .:. : : : . : CCDS14 QHAKVFCTKTSDTVCDSCEDSTYTQLWNWVPECLSCGSRCSSD---QVETQACTREQNRI 70 80 90 100 110 110 120 130 140 150 pF1KE1 CTCEEGWHCT---SEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFE :::. ::.:. .:.:. :. :.: ::::: . .: .::..:.:: : :::..:. . CCDS14 CTCRPGWYCALSKQEGCRLCAPLRKCRPGFGVARPGTETSDVVCKPCAPGTFSNTTSSTD 120 130 140 150 160 170 160 170 180 190 200 210 pF1KE1 KCHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVA :.: :. :: :. . :.:: . :.. CCDS14 ICRPHQICN----VVAIPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRSQHTQPTPEP 180 190 200 210 220 230 220 230 240 250 260 270 pF1KE1 KKPTNKAPHPKQEPQEINFPDDLPGSNTAAPVQETLHGCQPVTQEDGKESRISVQERQ CCDS14 STAPSTSFLLPMGPSPPAEGSTGDFALPVGLIVGVTALGLLIIGVVNCVIMTQVKKKPLC 240 250 260 270 280 290 >>CCDS59233.1 LTBR gene_id:4055|Hs108|chr12 (416 aa) initn: 351 init1: 173 opt: 412 Z-score: 372.8 bits: 77.4 E(32554): 1.9e-14 Smith-Waterman score: 441; 30.4% identity (54.4% similar) in 283 aa overlap (22-263:15-296) 10 20 30 40 50 pF1KE1 MVRLPLQCVLWGCLLTAVHPEPPTA-----CR--EKQYLINSQ--CCSLCQPGQKLVSDC :: : :: ::.: .. ::: : :: . . : CCDS59 MEATGISLASQLKVPPYASENQTCRDQEKEYYEPQHRICCSRCPPGTYVSAKC 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 TEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTICTCEEGWHC ... .: : :.:. . . :: : :. . ::: .::. ::. : : :. : : CCDS59 SRIRDTVCATCAENSYNEHWNYLTICQLCRPCDPVMGLEEIAPCTSKRKTQCRCQPGMFC 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 TSEA--CESCVLHRSCSPGFGVK-QIATGVSDTICEPCPVGFFSNVSSAFEKCHPWTSCE .. : : : : .: :: .. . .: ... : :: .: :.:.:: .:.: : :: CCDS59 AAWALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTSSPSARCQPHTRCE 120 130 140 150 160 170 170 180 190 200 210 pF1KE1 TKDLVVQQAGTNKTDVVCG------PQDRLRALVVIPIIFGILFAILLVLVF--IKK--- .. :: :: ..:..: : . ..... ... . : .::. :: : : CCDS59 NQGLVEAAPGTAQSDTTCKNPLEPLPPEMSGTMLMLAVLLPLAFFLLLATVFSCIWKSHP 180 190 200 210 220 230 220 230 240 250 pF1KE1 ---------VAKKPTNKAPHP---KQEPQEIN--FPDD----LPGSNTAAPVQETLHGCQ . ..: ...:.: . :: . . ::: :: :. ..::. : . CCDS59 SLCRKLGSLLKRRPQGEGPNPVAGSWEPPKAHPYFPDLVQPLLPISGDVSPVSTGLPAA- 240 250 260 270 280 290 260 270 pF1KE1 PVTQEDGKESRISVQERQ :: . CCDS59 PVLEAGVPQQQSPLDLTREPQLEPGEQSQVAHGTNGIHVTGGSMTITGNIYIYNGPVLGG 300 310 320 330 340 350 >>CCDS8544.1 LTBR gene_id:4055|Hs108|chr12 (435 aa) initn: 318 init1: 173 opt: 412 Z-score: 372.6 bits: 77.4 E(32554): 2e-14 Smith-Waterman score: 461; 30.8% identity (55.3% similar) in 302 aa overlap (5-263:16-315) 10 20 30 pF1KE1 MVRLPLQCVLWGCLLTAVHPE--PPTA-----CR--EKQYLINSQ--CC :: :.: ::.: .:. :: : :: ::.: .. :: CCDS85 MLLPWATSAPGLAWGPLVLGLFG-LLAASQPQAVPPYASENQTCRDQEKEYYEPQHRICC 10 20 30 40 50 40 50 60 70 80 90 pF1KE1 SLCQPGQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSE : : :: . . :... .: : :.:. . . :: : :. . ::: .::. ::. CCDS85 SRCPPGTYVSAKCSRIRDTVCATCAENSYNEHWNYLTICQLCRPCDPVMGLEEIAPCTSK 60 70 80 90 100 110 100 110 120 130 140 150 pF1KE1 TDTICTCEEGWHCTSEA--CESCVLHRSCSPGFGVK-QIATGVSDTICEPCPVGFFSNVS : : :. : :.. : : : : .: :: .. . .: ... : :: .: :.:.: CCDS85 RKTQCRCQPGMFCAAWALECTHCELLSDCPPGTEAELKDEVGKGNNHCVPCKAGHFQNTS 120 130 140 150 160 170 160 170 180 190 200 pF1KE1 SAFEKCHPWTSCETKDLVVQQAGTNKTDVVCG------PQDRLRALVVIPIIFGILFAIL : .:.: : ::.. :: :: ..:..: : . ..... ... . : .: CCDS85 SPSARCQPHTRCENQGLVEAAPGTAQSDTTCKNPLEPLPPEMSGTMLMLAVLLPLAFFLL 180 190 200 210 220 230 210 220 230 240 pF1KE1 LVLVF----------IKKVA----KKPTNKAPHP---KQEPQEIN--FPDD----LPGSN :. :: .:.. ..: ...:.: . :: . . ::: :: :. CCDS85 LATVFSCIWKSHPSLCRKLGSLLKRRPQGEGPNPVAGSWEPPKAHPYFPDLVQPLLPISG 240 250 260 270 280 290 250 260 270 pF1KE1 TAAPVQETLHGCQPVTQEDGKESRISVQERQ ..::. : . :: . CCDS85 DVSPVSTGLPAA-PVLEAGVPQQQSPLDLTREPQLEPGEQSQVAHGTNGIHVTGGSMTIT 300 310 320 330 340 350 >>CCDS44046.1 TNFRSF14 gene_id:8764|Hs108|chr1 (283 aa) initn: 269 init1: 269 opt: 381 Z-score: 347.9 bits: 72.2 E(32554): 4.6e-13 Smith-Waterman score: 381; 31.9% identity (61.0% similar) in 182 aa overlap (6-182:21-197) 10 20 30 40 pF1KE1 MVRLPLQCVLWGCLLTA--VHPEPPTACREKQYLINSQCCSLCQP :. ::. .: : : :. :.: .: ..:.:: :.: CCDS44 MEPPGDWGPPPWRSTPKTDVLRLVLYLTFLGAPCYAPALPS-CKEDEYPVGSECCPKCSP 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 GQKLVSDCTEFTETECLPCGESEFLDTWNRETHCHQHKYCDPNLGLRVQQKGTSETDTIC : .. : :.: : : :: . .. : ..: : ..::: .:::.... . ...: CCDS44 GYRVKEACGELTGTVCEPCPPGTYIAHLNGLSKCLQCQMCDPAMGLRASRNCSRTENAVC 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 TCEEGWHCT---SEACESCVLHRSCSPGFGVKQIATGVSDTICEPCPVGFFSNVSSAFEK : : : .. : .: . . ::: :.. .: .::.:. :: : :: ....:. CCDS44 GCSPGHFCIVQDGDHCAACRAYATSSPGQRVQKGGTESQDTLCQNCPPGTFSP-NGTLEE 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 CHPWTSCETKDLVVQQAGTNKTDVVCGPQDRLRALVVIPIIFGILFAILLVLVFIKKVAK :. :.: . .: .::.. . CCDS44 CQHQTKC---SWLVTKAGAGTSSSHWVWWFLSGSLVIVIVCSTVGLIICVKRRKPRGDVV 180 190 200 210 220 230 277 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 01:41:32 2016 done: Mon Nov 7 01:41:32 2016 Total Scan time: 2.440 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]