FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4550, 657 aa 1>>>pF1KE4550 657 - 657 aa - 657 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.4195+/-0.000989; mu= 14.1163+/- 0.060 mean_var=89.7504+/-17.468, 0's: 0 Z-trim(105.9): 18 B-trim: 0 in 0/51 Lambda= 0.135380 statistics sampled from 8662 (8670) to 8662 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.629), E-opt: 0.2 (0.266), width: 16 Scan time: 2.510 The best scores are: opt bits E(32554) CCDS45820.1 THOC1 gene_id:9984|Hs108|chr18 ( 657) 4367 863.5 0 >>CCDS45820.1 THOC1 gene_id:9984|Hs108|chr18 (657 aa) initn: 4367 init1: 4367 opt: 4367 Z-score: 4611.1 bits: 863.5 E(32554): 0 Smith-Waterman score: 4367; 100.0% identity (100.0% similar) in 657 aa overlap (1-657:1-657) 10 20 30 40 50 60 pF1KE4 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDEEAPTTCSIPIDYNLYRKFWS 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRIIRKRTAPE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE4 DFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQADPENMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 DFLGKGPTKKILMGNEELTRLWNLCPDNMEACKSETREHMPTLEEFFEEAIEQADPENMV 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE4 ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE4 KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR 550 560 570 580 590 600 610 620 630 640 650 pF1KE4 QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS45 QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS 610 620 630 640 650 657 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:01:51 2016 done: Sun Nov 6 00:01:52 2016 Total Scan time: 2.510 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]