FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4431, 450 aa 1>>>pF1KE4431 450 - 450 aa - 450 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8740+/-0.0012; mu= 1.8194+/- 0.071 mean_var=237.7205+/-47.701, 0's: 0 Z-trim(108.8): 22 B-trim: 0 in 0/52 Lambda= 0.083184 statistics sampled from 10415 (10423) to 10415 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.678), E-opt: 0.2 (0.32), width: 16 Scan time: 3.110 The best scores are: opt bits E(32554) CCDS11441.1 BECN1 gene_id:8678|Hs108|chr17 ( 450) 2989 372.1 6.5e-103 CCDS81433.1 BECN2 gene_id:441925|Hs108|chr1 ( 431) 1559 200.5 2.9e-51 CCDS82132.1 BECN1 gene_id:8678|Hs108|chr17 ( 279) 1201 157.3 1.8e-38 >>CCDS11441.1 BECN1 gene_id:8678|Hs108|chr17 (450 aa) initn: 2989 init1: 2989 opt: 2989 Z-score: 1961.2 bits: 372.1 E(32554): 6.5e-103 Smith-Waterman score: 2989; 100.0% identity (100.0% similar) in 450 aa overlap (1-450:1-450) 10 20 30 40 50 60 pF1KE4 MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ETNSGEEPFIETPRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ETNSGEEPFIETPRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 DLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 QMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEW 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 NEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 NEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 WDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 WDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFN 370 380 390 400 410 420 430 440 450 pF1KE4 SEEQWTKALKFMLTNLKWGLAWVSSQFYNK :::::::::::::::::::::::::::::: CCDS11 SEEQWTKALKFMLTNLKWGLAWVSSQFYNK 430 440 450 >>CCDS81433.1 BECN2 gene_id:441925|Hs108|chr1 (431 aa) initn: 1539 init1: 1146 opt: 1559 Z-score: 1033.9 bits: 200.5 E(32554): 2.9e-51 Smith-Waterman score: 1559; 56.1% identity (76.8% similar) in 435 aa overlap (14-447:4-429) 10 20 30 40 50 60 pF1KE4 MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEE . :.:::: : :::. : . .. :: :..::.::.:.: CCDS81 MSSIRFLCQRCHQALKLSGS---SESRSLPAAPAP--TSGQAEPGDTREP 10 20 30 40 70 80 90 100 110 120 pF1KE4 ETNSGEEPFIETPRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTG ... : : .:::.: : : .: :: :::.:: :.:. :: :..: CCDS81 GVTTREVTDAEE-QQDGASSRSPPGDGSVSKGHANIFTLLGEL---GAMHMLSSIQKAAG 50 60 70 80 90 100 130 140 150 160 170 pF1KE4 DLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILE-QMNEDDSEQ :.:::.:::. :::::::::::.::.::: :: .:: . :::.:::: : .::.. CCDS81 DIFDIVSGQAVVDHPLCEECTDSLLEQLDIQLALTEADSQNYQRCLETGELATSEDEAAA 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE4 LQMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQ :. ::..: ::: ::.::::::..: .: .:. .:::: .:::.: :. :.:: .::: CCDS81 LRAELRDLELEEARLVQELEDVDRNNARAAADLQAAQAEAAELDQQERQHYRDYSALKRQ 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE4 QLELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVE :::: :.: .::::..::..: :.::. : :.:::.:: : .:.::::::::::.: : CCDS81 QLELLDQLGNVENQLQYARVQRDRLKEINCFTATFEIWVEGPLGVINNFRLGRLPTVRVG 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 WNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRF :::::.::::..::: .::: .::.::::::.: ::::::.:::: ::::.: :: CCDS81 WNEINTAWGQAALLLLTLANTIGLQFQRYRLIPCGNHSYLKSLTDDRTELPLFCYGGQDV 290 300 310 320 330 340 360 370 380 390 400 410 pF1KE4 FWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQF : .::.:.::::::::.::::::.:::: . ::: ..:: : .::.:: : :::.:.. CCDS81 FLNNKYDRAMVAFLDCMQQFKEEAEKGELGLSLPYGIQVETGLMEDVGGRGECYSIRTHL 350 360 370 380 390 400 420 430 440 450 pF1KE4 NSEEQWTKALKFMLTNLKWGLAWVSSQFYNK :..: ::::::::: :.::.: ::.:.. CCDS81 NTQELWTKALKFMLINFKWSLIWVASRYQK 410 420 430 >>CCDS82132.1 BECN1 gene_id:8678|Hs108|chr17 (279 aa) initn: 1775 init1: 1198 opt: 1201 Z-score: 804.2 bits: 157.3 E(32554): 1.8e-38 Smith-Waterman score: 1604; 77.9% identity (78.2% similar) in 348 aa overlap (1-348:1-272) 10 20 30 40 50 60 pF1KE4 MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 MEGSKTSNNSTMQVSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQEE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 ETNSGEEPFIETPRQDGVSRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTG ::::::::::::::::::::::::::: CCDS82 ETNSGEEPFIETPRQDGVSRRFIPPAR--------------------------------- 70 80 130 140 150 160 170 180 pF1KE4 DLFDIMSGQTDVDHPLCEECTDTLLDQLDTQLNVTENECQNYKRCLEILEQMNEDDSEQL ::::::::::::::::: CCDS82 -------------------------------------------RCLEILEQMNEDDSEQL 90 100 190 200 210 220 230 240 pF1KE4 QMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 QMELKELALEEERLIQELEDVEKNRKIVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQ 110 120 130 140 150 160 250 260 270 280 290 300 pF1KE4 LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LELDDELKSVENQMRYAQTQLDKLKKTNVFNATFHIWHSGQFGTINNFRLGRLPSVPVEW 170 180 190 200 210 220 310 320 330 340 350 360 pF1KE4 NEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKELPLYCSGGLRFF :::::::::::::::::::::::::::::::::::::::::::::::. CCDS82 NEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHSYLESLTDKSKDGCGERQD 230 240 250 260 270 370 380 390 400 410 420 pF1KE4 WDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGKIEDTGGSGGSYSIKTQFN 450 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:39:45 2016 done: Sun Nov 6 00:39:46 2016 Total Scan time: 3.110 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]