FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6138, 135 aa 1>>>pF1KE6138 135 - 135 aa - 135 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5085+/-0.000738; mu= 10.4646+/- 0.045 mean_var=66.3672+/-13.254, 0's: 0 Z-trim(108.6): 6 B-trim: 150 in 1/50 Lambda= 0.157434 statistics sampled from 10347 (10350) to 10347 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.712), E-opt: 0.2 (0.318), width: 16 Scan time: 1.590 The best scores are: opt bits E(32554) CCDS10320.1 RPS17 gene_id:6218|Hs108|chr15 ( 135) 871 206.0 6e-54 >>CCDS10320.1 RPS17 gene_id:6218|Hs108|chr15 (135 aa) initn: 871 init1: 871 opt: 871 Z-score: 1082.1 bits: 206.0 E(32554): 6e-54 Smith-Waterman score: 871; 100.0% identity (100.0% similar) in 135 aa overlap (1-135:1-135) 10 20 30 40 50 60 pF1KE6 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS10 IQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVT 70 80 90 100 110 120 130 pF1KE6 QPTVGMNFKTPRGPV ::::::::::::::: CCDS10 QPTVGMNFKTPRGPV 130 135 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 09:47:20 2016 done: Tue Nov 8 09:47:20 2016 Total Scan time: 1.590 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]