FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1492, 846 aa 1>>>pF1KE1492 846 - 846 aa - 846 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.2331+/-0.00105; mu= 6.1737+/- 0.063 mean_var=127.6115+/-25.216, 0's: 0 Z-trim(107.6): 32 B-trim: 22 in 1/50 Lambda= 0.113535 statistics sampled from 9630 (9649) to 9630 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.655), E-opt: 0.2 (0.296), width: 16 Scan time: 4.460 The best scores are: opt bits E(32554) CCDS1620.1 EXO1 gene_id:9156|Hs108|chr1 ( 846) 5582 926.2 0 CCDS44336.1 EXO1 gene_id:9156|Hs108|chr1 ( 803) 5273 875.6 0 CCDS8010.1 FEN1 gene_id:2237|Hs108|chr11 ( 380) 371 72.6 1.4e-12 >>CCDS1620.1 EXO1 gene_id:9156|Hs108|chr1 (846 aa) initn: 5582 init1: 5582 opt: 5582 Z-score: 4946.2 bits: 926.2 E(32554): 0 Smith-Waterman score: 5582; 99.8% identity (99.8% similar) in 846 aa overlap (1-846:1-846) 10 20 30 40 50 60 pF1KE1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 DDESHPLREGACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 DDESHPLREEACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE1 KLCLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 KLRLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE1 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS16 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV 790 800 810 820 830 840 pF1KE1 QRAIFQ :::::: CCDS16 QRAIFQ >>CCDS44336.1 EXO1 gene_id:9156|Hs108|chr1 (803 aa) initn: 5273 init1: 5273 opt: 5273 Z-score: 4673.1 bits: 875.6 E(32554): 0 Smith-Waterman score: 5273; 99.8% identity (99.8% similar) in 802 aa overlap (1-802:1-802) 10 20 30 40 50 60 pF1KE1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRYVGFCM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREGKVSEARECFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSDLLAFGCK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KVILKMDQFGNGLEIDQARLGMCRQLGDVFTEEKFRYMCILSGCDYLSSLRGIGLAKACK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 VLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVFDPIKRKLIPLNA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 YEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMPAHSRSHSWDDKT 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 CQKSANVSSIWHRNYSPRPESGTVSDAPQLKENPSTVGVERVISTKGLNLPRKSSIVKRP 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE1 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 RSAELSEDDLLSQYSLSFTKKTKKNSSEGNKSLSFSEVFVPDLVNGPTNKKSVSTPPRTR 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE1 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 NKFATFLQRKNEESGAVVVPGTRSRFFCSSDSTDCVSNKVSIQPLDETAVTDKENNLHES 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE1 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 EYGDQEGKRLVDTDVARNSSDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE1 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 TLGTLRSCFSWSGGLGDFSRTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESS 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE1 DDESHPLREGACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS ::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 DDESHPLREEACSSQSQESGEFSLQSSNASKLSQCSSKDSDSEESDCNIKLLDSQSDQTS 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE1 KLCLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN :: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS44 KLRLSHFSKKDTPLRNKVPGLYKSSSADSLSTTKIKPLGPARASGLSKKPASIQKRKHHN 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE1 AENKPGLQIKLNELWKNFGFKKDSEKLPPCKKPLSPVRDNIQLTPEAEEDIFNKPECGRV :::::::::::::::::::::: CCDS44 AENKPGLQIKLNELWKNFGFKKF 790 800 >>CCDS8010.1 FEN1 gene_id:2237|Hs108|chr11 (380 aa) initn: 255 init1: 221 opt: 371 Z-score: 339.1 bits: 72.6 E(32554): 1.4e-12 Smith-Waterman score: 371; 29.8% identity (59.3% similar) in 302 aa overlap (1-290:1-291) 10 20 30 40 50 pF1KE1 MGIQGLLQFIKEASEPIHVRK-----YKGQVVAVDTYCWLHKGAIACAE-----KLAKGE :::::: ..: ... : .:. : :. ::.:. ... :: . . .:: CCDS80 MGIQGLAKLIADVA-PSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGE 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 PTDRYVGFCMKFVNMLLSHGIKPILVFDGCTLPSKKEVERSRRERRQANLLKGKQLLREG :.. .:. .. . :. .::::. :::: :. : : ..: .:.:. : : . . CCDS80 TTSHLMGMFYRTIRMM-ENGIKPVYVFDGKP-PQLKSGELAKRSERRAEAEKQLQQAQAA 60 70 80 90 100 110 120 130 140 150 160 pF1KE1 KVSEARECFT-RSINITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIIT . . : :: : ...:. . . .:. : :: ::.:. : : ::: : : : CCDS80 GAEQEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAAT 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE1 EDSDLLAFGCKKVILKMDQFGNGLEIDQARLGMCRQLGDV-FTEEKFRYMCILSGCDYLS :: : :.:: . :... ... .. .. . : : .. ...:.: .::: : :: CCDS80 EDMDCLTFG-SPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCE 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE1 SLRGIGLAKACKVLRLANNPDIVKVIKKIGHYLKMNITVPEDYINGFIRANNTFLYQLVF :.:::: .: ... .. .: ...... . :::.... .:.. :: :. CCDS80 SIRGIGPKRAVDLIQ--KHKSIEEIVRRLD---PNKYPVPENWLHK--EAHQLFLEPEVL 240 250 260 270 280 290 300 310 320 330 340 pF1KE1 DPIKRKLIPLNAYEDDVDPETLSYAGQYVDDSIALQIALGNKDINTFEQIDDYNPDTAMP :: CCDS80 DPESVELKWSEPNEEELIKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGS 290 300 310 320 330 340 846 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:13:08 2016 done: Mon Nov 7 02:13:09 2016 Total Scan time: 4.460 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]