FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5122, 113 aa 1>>>pF1KE5122 113 - 113 aa - 113 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.4256+/-0.000348; mu= 14.4295+/- 0.021 mean_var=50.7270+/-10.430, 0's: 0 Z-trim(112.8): 10 B-trim: 0 in 0/50 Lambda= 0.180075 statistics sampled from 21889 (21895) to 21889 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.647), E-opt: 0.2 (0.257), width: 16 Scan time: 3.940 The best scores are: opt bits E(85289) NP_001335 (OMIM: 600243) dolichyl-diphosphooligosa ( 113) 727 196.1 1e-50 >>NP_001335 (OMIM: 600243) dolichyl-diphosphooligosaccha (113 aa) initn: 727 init1: 727 opt: 727 Z-score: 1031.7 bits: 196.1 E(85289): 1e-50 Smith-Waterman score: 727; 100.0% identity (100.0% similar) in 113 aa overlap (1-113:1-113) 10 20 30 40 50 60 pF1KE5 MSASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MSASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGF 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 ISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ISCVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFASTILHLVVMNFVG 70 80 90 100 110 113 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 07:18:20 2016 done: Tue Nov 8 07:18:21 2016 Total Scan time: 3.940 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]