FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB7770, 477 aa 1>>>pF1KB7770 477 - 477 aa - 477 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8683+/-0.00042; mu= 15.9629+/- 0.026 mean_var=89.7328+/-18.554, 0's: 0 Z-trim(112.6): 400 B-trim: 0 in 0/53 Lambda= 0.135394 statistics sampled from 21110 (21524) to 21110 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.252), width: 16 Scan time: 8.950 The best scores are: opt bits E(85289) XP_011532143 (OMIM: 125853,601487,601665,604367,60 ( 477) 3162 628.1 1.7e-179 NP_619725 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179 NP_619726 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179 NP_005028 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179 NP_056953 (OMIM: 125853,601487,601665,604367,60933 ( 505) 3162 628.1 1.7e-179 XP_011532144 (OMIM: 125853,601487,601665,604367,60 ( 445) 2657 529.4 7.8e-150 NP_001165290 (OMIM: 600409) peroxisome proliferato ( 402) 1724 347.1 5.2e-95 XP_006715186 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_016866462 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_011513009 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_016866460 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_016866463 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_005249250 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_016866461 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_011513011 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 NP_006229 (OMIM: 600409) peroxisome proliferator-a ( 441) 1724 347.2 5.6e-95 XP_006715183 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 XP_011513012 (OMIM: 600409) PREDICTED: peroxisome ( 441) 1724 347.2 5.6e-95 NP_001165289 (OMIM: 600409) peroxisome proliferato ( 441) 1724 347.2 5.6e-95 XP_011528544 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_005261713 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_011528545 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_005261712 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_011528542 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_011528541 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_011528543 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 XP_006724333 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 NP_005027 (OMIM: 170998) peroxisome proliferator-a ( 468) 1714 345.2 2.3e-94 NP_001001928 (OMIM: 170998) peroxisome proliferato ( 468) 1714 345.2 2.3e-94 XP_006724332 (OMIM: 170998) PREDICTED: peroxisome ( 468) 1714 345.2 2.3e-94 NP_001317544 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92 XP_011532146 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92 XP_011532145 (OMIM: 125853,601487,601665,604367,60 ( 278) 1675 337.4 3e-92 NP_803184 (OMIM: 600409) peroxisome proliferator-a ( 361) 1342 272.5 1.4e-72 XP_016866464 (OMIM: 600409) PREDICTED: peroxisome ( 365) 1342 272.5 1.4e-72 NP_001165291 (OMIM: 600409) peroxisome proliferato ( 343) 1257 255.9 1.3e-67 XP_011528547 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65 XP_016884328 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65 XP_011528546 (OMIM: 170998) PREDICTED: peroxisome ( 334) 1220 248.6 1.9e-65 XP_016884329 (OMIM: 170998) PREDICTED: peroxisome ( 265) 1001 205.8 1.2e-52 NP_055064 (OMIM: 268100,604485,611131) photorecept ( 410) 498 107.7 6.5e-23 NP_068370 (OMIM: 602408) nuclear receptor subfamil ( 614) 468 101.9 5.2e-21 XP_006713514 (OMIM: 602304) PREDICTED: nuclear rec ( 448) 457 99.7 1.8e-20 NP_057430 (OMIM: 268100,604485,611131) photorecept ( 367) 430 94.3 5.9e-19 NP_599023 (OMIM: 600825) nuclear receptor ROR-alph ( 523) 414 91.3 6.9e-18 NP_001273031 (OMIM: 603849) nuclear receptor subfa ( 422) 405 89.5 2e-17 XP_011520177 (OMIM: 600825) PREDICTED: nuclear rec ( 504) 404 89.4 2.6e-17 NP_005051 (OMIM: 602943,616622) nuclear receptor R ( 518) 403 89.2 3e-17 XP_006711547 (OMIM: 602943,616622) PREDICTED: nucl ( 651) 403 89.2 3.6e-17 NP_001001523 (OMIM: 602943,616622) nuclear recepto ( 497) 400 88.6 4.4e-17 >>XP_011532143 (OMIM: 125853,601487,601665,604367,609338 (477 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179 Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477) 10 20 30 40 50 60 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ 370 380 390 400 410 420 430 440 450 460 470 pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY 430 440 450 460 470 >>NP_619725 (OMIM: 125853,601487,601665,604367,609338) p (477 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179 Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477) 10 20 30 40 50 60 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ 370 380 390 400 410 420 430 440 450 460 470 pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY 430 440 450 460 470 >>NP_619726 (OMIM: 125853,601487,601665,604367,609338) p (477 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179 Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477) 10 20 30 40 50 60 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ 370 380 390 400 410 420 430 440 450 460 470 pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY 430 440 450 460 470 >>NP_005028 (OMIM: 125853,601487,601665,604367,609338) p (477 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.7 bits: 628.1 E(85289): 1.7e-179 Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477) 10 20 30 40 50 60 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ 370 380 390 400 410 420 430 440 450 460 470 pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY 430 440 450 460 470 >>NP_056953 (OMIM: 125853,601487,601665,604367,609338) p (505 aa) initn: 3162 init1: 3162 opt: 3162 Z-score: 3343.3 bits: 628.1 E(85289): 1.7e-179 Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:29-505) 10 20 30 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF :::::::::::::::::::::::::::::::: NP_056 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC 130 140 150 160 170 180 160 170 180 190 200 210 pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR 190 200 210 220 230 240 220 230 240 250 260 270 pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE 250 260 270 280 290 300 280 290 300 310 320 330 pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS 310 320 330 340 350 360 340 350 360 370 380 390 pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII 370 380 390 400 410 420 400 410 420 430 440 450 pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL 430 440 450 460 470 480 460 470 pF1KB7 LQVIKKTETDMSLHPLLQEIYKDLY ::::::::::::::::::::::::: NP_056 LQVIKKTETDMSLHPLLQEIYKDLY 490 500 >>XP_011532144 (OMIM: 125853,601487,601665,604367,609338 (445 aa) initn: 2657 init1: 2657 opt: 2657 Z-score: 2811.0 bits: 529.4 E(85289): 7.8e-150 Smith-Waterman score: 2657; 99.7% identity (99.7% similar) in 398 aa overlap (1-398:29-426) 10 20 30 pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF :::::::::::::::::::::::::::::::: XP_011 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF 10 20 30 40 50 60 40 50 60 70 80 90 pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT 70 80 90 100 110 120 100 110 120 130 140 150 pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC 130 140 150 160 170 180 160 170 180 190 200 210 pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR 190 200 210 220 230 240 220 230 240 250 260 270 pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE 250 260 270 280 290 300 280 290 300 310 320 330 pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS 310 320 330 340 350 360 340 350 360 370 380 390 pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII 370 380 390 400 410 420 400 410 420 430 440 450 pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL ::: :: XP_011 LSGARPRKLPPAAVSASSGHSTSVH 430 440 >>NP_001165290 (OMIM: 600409) peroxisome proliferator-ac (402 aa) initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.7 bits: 347.1 E(85289): 5.2e-95 Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:10-402) 60 70 80 90 100 110 pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR .::: .. :. . : . . .::: NP_001 MHQRDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR 10 20 30 120 130 140 150 160 170 pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA ::::::::::::::::::::::::::::.:: :..:. .:.:.::.:::::::::::::: NP_001 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA 40 50 60 70 80 90 180 190 200 210 220 230 pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA .:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .:: NP_001 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK 100 110 120 130 140 150 240 250 260 270 280 290 pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE :::.:::::.. .::::.:...: ..: . .:... ::.....: :: .:: NP_001 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE 160 170 180 190 200 210 300 310 320 330 340 350 pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.::: NP_001 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE 220 230 240 250 260 270 360 370 380 390 400 410 pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: ::: NP_001 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD 280 290 300 310 320 330 420 430 440 450 460 470 pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. :::::::: NP_001 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE 340 350 360 370 380 390 pF1KB7 IYKDLY ::::.: NP_001 IYKDMY 400 >>XP_006715186 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa) initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95 Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441) 60 70 80 90 100 110 pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR .::: .. :. . : . . .::: XP_006 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR 20 30 40 50 60 70 120 130 140 150 160 170 pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA ::::::::::::::::::::::::::::.:: :..:. .:.:.::.:::::::::::::: XP_006 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA 80 90 100 110 120 130 180 190 200 210 220 230 pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA .:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .:: XP_006 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK 140 150 160 170 180 190 240 250 260 270 280 290 pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE :::.:::::.. .::::.:...: ..: . .:... ::.....: :: .:: XP_006 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.::: XP_006 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: ::: XP_006 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD 320 330 340 350 360 370 420 430 440 450 460 470 pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. :::::::: XP_006 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE 380 390 400 410 420 430 pF1KB7 IYKDLY ::::.: XP_006 IYKDMY 440 >>XP_016866462 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa) initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95 Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441) 60 70 80 90 100 110 pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR .::: .. :. . : . . .::: XP_016 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR 20 30 40 50 60 70 120 130 140 150 160 170 pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA ::::::::::::::::::::::::::::.:: :..:. .:.:.::.:::::::::::::: XP_016 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA 80 90 100 110 120 130 180 190 200 210 220 230 pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA .:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .:: XP_016 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK 140 150 160 170 180 190 240 250 260 270 280 290 pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE :::.:::::.. .::::.:...: ..: . .:... ::.....: :: .:: XP_016 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.::: XP_016 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: ::: XP_016 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD 320 330 340 350 360 370 420 430 440 450 460 470 pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. :::::::: XP_016 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE 380 390 400 410 420 430 pF1KB7 IYKDLY ::::.: XP_016 IYKDMY 440 >>XP_011513009 (OMIM: 600409) PREDICTED: peroxisome prol (441 aa) initn: 1706 init1: 1163 opt: 1724 Z-score: 1826.1 bits: 347.2 E(85289): 5.6e-95 Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441) 60 70 80 90 100 110 pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR .::: .. :. . : . . .::: XP_011 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR 20 30 40 50 60 70 120 130 140 150 160 170 pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA ::::::::::::::::::::::::::::.:: :..:. .:.:.::.:::::::::::::: XP_011 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA 80 90 100 110 120 130 180 190 200 210 220 230 pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA .:::::::::::::.:::.::.: .... .: ::. :::.:..::.:..:.:.: .:: XP_011 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK 140 150 160 170 180 190 240 250 260 270 280 290 pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE :::.:::::.. .::::.:...: ..: . .:... ::.....: :: .:: XP_011 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE 200 210 220 230 240 250 300 310 320 330 340 350 pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.::: XP_011 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.:: .: ::: XP_011 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD 320 330 340 350 360 370 420 430 440 450 460 470 pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. :::::::: XP_011 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE 380 390 400 410 420 430 pF1KB7 IYKDLY ::::.: XP_011 IYKDMY 440 477 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 07:38:09 2016 done: Sat Nov 5 07:38:11 2016 Total Scan time: 8.950 Total Display time: 0.080 Function used was FASTA [36.3.4 Apr, 2011]