Result of FASTA (omim) for pFN21AB7770
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB7770, 477 aa
  1>>>pF1KB7770 477 - 477 aa - 477 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.8683+/-0.00042; mu= 15.9629+/- 0.026
 mean_var=89.7328+/-18.554, 0's: 0 Z-trim(112.6): 400  B-trim: 0 in 0/53
 Lambda= 0.135394
 statistics sampled from 21110 (21524) to 21110 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.252), width:  16
 Scan time:  8.950

The best scores are:                                      opt bits E(85289)
XP_011532143 (OMIM: 125853,601487,601665,604367,60 ( 477) 3162 628.1 1.7e-179
NP_619725 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_619726 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_005028 (OMIM: 125853,601487,601665,604367,60933 ( 477) 3162 628.1 1.7e-179
NP_056953 (OMIM: 125853,601487,601665,604367,60933 ( 505) 3162 628.1 1.7e-179
XP_011532144 (OMIM: 125853,601487,601665,604367,60 ( 445) 2657 529.4 7.8e-150
NP_001165290 (OMIM: 600409) peroxisome proliferato ( 402) 1724 347.1 5.2e-95
XP_006715186 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_016866462 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_011513009 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_016866460 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_016866463 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_005249250 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_016866461 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_011513011 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
NP_006229 (OMIM: 600409) peroxisome proliferator-a ( 441) 1724 347.2 5.6e-95
XP_006715183 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
XP_011513012 (OMIM: 600409) PREDICTED: peroxisome  ( 441) 1724 347.2 5.6e-95
NP_001165289 (OMIM: 600409) peroxisome proliferato ( 441) 1724 347.2 5.6e-95
XP_011528544 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_005261713 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_011528545 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_005261712 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_011528542 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_011528541 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_011528543 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
XP_006724333 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
NP_005027 (OMIM: 170998) peroxisome proliferator-a ( 468) 1714 345.2 2.3e-94
NP_001001928 (OMIM: 170998) peroxisome proliferato ( 468) 1714 345.2 2.3e-94
XP_006724332 (OMIM: 170998) PREDICTED: peroxisome  ( 468) 1714 345.2 2.3e-94
NP_001317544 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92
XP_011532146 (OMIM: 125853,601487,601665,604367,60 ( 250) 1675 337.4 2.7e-92
XP_011532145 (OMIM: 125853,601487,601665,604367,60 ( 278) 1675 337.4   3e-92
NP_803184 (OMIM: 600409) peroxisome proliferator-a ( 361) 1342 272.5 1.4e-72
XP_016866464 (OMIM: 600409) PREDICTED: peroxisome  ( 365) 1342 272.5 1.4e-72
NP_001165291 (OMIM: 600409) peroxisome proliferato ( 343) 1257 255.9 1.3e-67
XP_011528547 (OMIM: 170998) PREDICTED: peroxisome  ( 334) 1220 248.6 1.9e-65
XP_016884328 (OMIM: 170998) PREDICTED: peroxisome  ( 334) 1220 248.6 1.9e-65
XP_011528546 (OMIM: 170998) PREDICTED: peroxisome  ( 334) 1220 248.6 1.9e-65
XP_016884329 (OMIM: 170998) PREDICTED: peroxisome  ( 265) 1001 205.8 1.2e-52
NP_055064 (OMIM: 268100,604485,611131) photorecept ( 410)  498 107.7 6.5e-23
NP_068370 (OMIM: 602408) nuclear receptor subfamil ( 614)  468 101.9 5.2e-21
XP_006713514 (OMIM: 602304) PREDICTED: nuclear rec ( 448)  457 99.7 1.8e-20
NP_057430 (OMIM: 268100,604485,611131) photorecept ( 367)  430 94.3 5.9e-19
NP_599023 (OMIM: 600825) nuclear receptor ROR-alph ( 523)  414 91.3 6.9e-18
NP_001273031 (OMIM: 603849) nuclear receptor subfa ( 422)  405 89.5   2e-17
XP_011520177 (OMIM: 600825) PREDICTED: nuclear rec ( 504)  404 89.4 2.6e-17
NP_005051 (OMIM: 602943,616622) nuclear receptor R ( 518)  403 89.2   3e-17
XP_006711547 (OMIM: 602943,616622) PREDICTED: nucl ( 651)  403 89.2 3.6e-17
NP_001001523 (OMIM: 602943,616622) nuclear recepto ( 497)  400 88.6 4.4e-17


>>XP_011532143 (OMIM: 125853,601487,601665,604367,609338  (477 aa)
 initn: 3162 init1: 3162 opt: 3162  Z-score: 3343.7  bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)

               10        20        30        40        50        60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
              370       380       390       400       410       420

              430       440       450       460       470       
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
              430       440       450       460       470       

>>NP_619725 (OMIM: 125853,601487,601665,604367,609338) p  (477 aa)
 initn: 3162 init1: 3162 opt: 3162  Z-score: 3343.7  bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)

               10        20        30        40        50        60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
              370       380       390       400       410       420

              430       440       450       460       470       
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
              430       440       450       460       470       

>>NP_619726 (OMIM: 125853,601487,601665,604367,609338) p  (477 aa)
 initn: 3162 init1: 3162 opt: 3162  Z-score: 3343.7  bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)

               10        20        30        40        50        60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
              370       380       390       400       410       420

              430       440       450       460       470       
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
              430       440       450       460       470       

>>NP_005028 (OMIM: 125853,601487,601665,604367,609338) p  (477 aa)
 initn: 3162 init1: 3162 opt: 3162  Z-score: 3343.7  bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:1-477)

               10        20        30        40        50        60
pF1KB7 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSFDIKPFTTVDFSSISTPHYEDIPFTRTDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB7 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECRVCGDKASG
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB7 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 FHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB7 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 RFGRMPQAEKEKLLAEISSDIDQLNPESADLRALAKHLYDSYIKSFPLTKAKARAILTGK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB7 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVEAVQEITEYA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB7 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 KSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB7 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQ
              370       380       390       400       410       420

              430       440       450       460       470       
pF1KB7 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 LKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKDLY
              430       440       450       460       470       

>>NP_056953 (OMIM: 125853,601487,601665,604367,609338) p  (505 aa)
 initn: 3162 init1: 3162 opt: 3162  Z-score: 3343.3  bits: 628.1 E(85289): 1.7e-179
Smith-Waterman score: 3162; 100.0% identity (100.0% similar) in 477 aa overlap (1-477:29-505)

                                           10        20        30  
pF1KB7                             MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
                                   ::::::::::::::::::::::::::::::::
NP_056 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
               10        20        30        40        50        60

             40        50        60        70        80        90  
pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
               70        80        90       100       110       120

            100       110       120       130       140       150  
pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
              130       140       150       160       170       180

            160       170       180       190       200       210  
pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
              190       200       210       220       230       240

            220       230       240       250       260       270  
pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
              250       260       270       280       290       300

            280       290       300       310       320       330  
pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
              310       320       330       340       350       360

            340       350       360       370       380       390  
pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
              370       380       390       400       410       420

            400       410       420       430       440       450  
pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
              430       440       450       460       470       480

            460       470       
pF1KB7 LQVIKKTETDMSLHPLLQEIYKDLY
       :::::::::::::::::::::::::
NP_056 LQVIKKTETDMSLHPLLQEIYKDLY
              490       500     

>>XP_011532144 (OMIM: 125853,601487,601665,604367,609338  (445 aa)
 initn: 2657 init1: 2657 opt: 2657  Z-score: 2811.0  bits: 529.4 E(85289): 7.8e-150
Smith-Waterman score: 2657; 99.7% identity (99.7% similar) in 398 aa overlap (1-398:29-426)

                                           10        20        30  
pF1KB7                             MTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
                                   ::::::::::::::::::::::::::::::::
XP_011 MGETLGDSPIDPESDSFTDTLSANISQEMTMVDTEMPFWPTNFGISSVDLSVMEDHSHSF
               10        20        30        40        50        60

             40        50        60        70        80        90  
pF1KB7 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DIKPFTTVDFSSISTPHYEDIPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKT
               70        80        90       100       110       120

            100       110       120       130       140       150  
pF1KB7 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QLYNKPHEEPSNSLMAIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNC
              130       140       150       160       170       180

            160       170       180       190       200       210  
pF1KB7 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAEISSDIDQLNPESADLR
              190       200       210       220       230       240

            220       230       240       250       260       270  
pF1KB7 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ALAKHLYDSYIKSFPLTKAKARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQE
              250       260       270       280       290       300

            280       290       300       310       320       330  
pF1KB7 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QSKEVAIRIFQGCQFRSVEAVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLAS
              310       320       330       340       350       360

            340       350       360       370       380       390  
pF1KB7 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVII
              370       380       390       400       410       420

            400       410       420       430       440       450  
pF1KB7 LSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQL
       ::: ::                                                      
XP_011 LSGARPRKLPPAAVSASSGHSTSVH                                   
              430       440                                        

>>NP_001165290 (OMIM: 600409) peroxisome proliferator-ac  (402 aa)
 initn: 1706 init1: 1163 opt: 1724  Z-score: 1826.7  bits: 347.1 E(85289): 5.2e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:10-402)

             60        70        80        90       100       110  
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
                                     .:::   .. :.     .  : . . .:::
NP_001                      MHQRDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
                                    10        20           30      

            120       130       140       150       160       170  
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
       ::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
NP_001 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
         40        50        60        70        80        90      

            180       190       200        210       220       230 
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
       .:::::::::::::.:::.::.: ....  .: ::. :::.:..::.:..:.:.: .:: 
NP_001 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
        100       110       120       130       140       150      

             240       250       260       270       280       290 
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
       :::.:::::..  .::::.:...: ..:  . .:...      ::.....:  ::  .::
NP_001 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
        160       170       180       190       200       210      

             300       310       320       330       340       350 
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
       .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
NP_001 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
        220       230       240       250       260       270      

             360       370       380       390       400       410 
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
       ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.::  .: :::
NP_001 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
        280       290       300       310       320       330      

             420       430       440       450       460       470 
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
       ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
NP_001 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
        340       350       360       370       380       390      

             
pF1KB7 IYKDLY
       ::::.:
NP_001 IYKDMY
        400  

>>XP_006715186 (OMIM: 600409) PREDICTED: peroxisome prol  (441 aa)
 initn: 1706 init1: 1163 opt: 1724  Z-score: 1826.1  bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)

             60        70        80        90       100       110  
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
                                     .:::   .. :.     .  : . . .:::
XP_006 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
       20        30        40        50        60           70     

            120       130       140       150       160       170  
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
       ::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_006 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
          80        90       100       110       120       130     

            180       190       200        210       220       230 
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
       .:::::::::::::.:::.::.: ....  .: ::. :::.:..::.:..:.:.: .:: 
XP_006 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
         140       150       160       170       180       190     

             240       250       260       270       280       290 
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
       :::.:::::..  .::::.:...: ..:  . .:...      ::.....:  ::  .::
XP_006 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
         200       210       220       230       240       250     

             300       310       320       330       340       350 
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
       .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_006 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
         260       270       280       290       300       310     

             360       370       380       390       400       410 
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
       ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.::  .: :::
XP_006 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
         320       330       340       350       360       370     

             420       430       440       450       460       470 
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
       ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_006 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
         380       390       400       410       420       430     

             
pF1KB7 IYKDLY
       ::::.:
XP_006 IYKDMY
         440 

>>XP_016866462 (OMIM: 600409) PREDICTED: peroxisome prol  (441 aa)
 initn: 1706 init1: 1163 opt: 1724  Z-score: 1826.1  bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)

             60        70        80        90       100       110  
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
                                     .:::   .. :.     .  : . . .:::
XP_016 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
       20        30        40        50        60           70     

            120       130       140       150       160       170  
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
       ::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_016 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
          80        90       100       110       120       130     

            180       190       200        210       220       230 
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
       .:::::::::::::.:::.::.: ....  .: ::. :::.:..::.:..:.:.: .:: 
XP_016 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
         140       150       160       170       180       190     

             240       250       260       270       280       290 
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
       :::.:::::..  .::::.:...: ..:  . .:...      ::.....:  ::  .::
XP_016 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
         200       210       220       230       240       250     

             300       310       320       330       340       350 
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
       .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_016 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
         260       270       280       290       300       310     

             360       370       380       390       400       410 
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
       ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.::  .: :::
XP_016 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
         320       330       340       350       360       370     

             420       430       440       450       460       470 
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
       ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_016 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
         380       390       400       410       420       430     

             
pF1KB7 IYKDLY
       ::::.:
XP_016 IYKDMY
         440 

>>XP_011513009 (OMIM: 600409) PREDICTED: peroxisome prol  (441 aa)
 initn: 1706 init1: 1163 opt: 1724  Z-score: 1826.1  bits: 347.2 E(85289): 5.6e-95
Smith-Waterman score: 1724; 62.9% identity (87.1% similar) in 396 aa overlap (83-477:49-441)

             60        70        80        90       100       110  
pF1KB7 IPFTRTDPVVADYKYDLKLQEYQSAIKVEPASPPYYSEKTQLYNKPHEEPSNSLMAIECR
                                     .:::   .. :.     .  : . . .:::
XP_011 EVAEAEGAPELNGGPQHALPSSSYTDLSRSSSPPSLLDQLQM---GCDGASCGSLNMECR
       20        30        40        50        60           70     

            120       130       140       150       160       170  
pF1KB7 VCGDKASGFHYGVHACEGCKGFFRRTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLA
       ::::::::::::::::::::::::::::.:: :..:. .:.:.::.::::::::::::::
XP_011 VCGDKASGFHYGVHACEGCKGFFRRTIRMKLEYEKCERSCKIQKKNRNKCQYCRFQKCLA
          80        90       100       110       120       130     

            180       190       200        210       220       230 
pF1KB7 VGMSHNAIRFGRMPQAEKEKLLAEISSDI-DQLNPESADLRALAKHLYDSYIKSFPLTKA
       .:::::::::::::.:::.::.: ....  .: ::. :::.:..::.:..:.:.: .:: 
XP_011 LGMSHNAIRFGRMPEAEKRKLVAGLTANEGSQYNPQVADLKAFSKHIYNAYLKNFNMTKK
         140       150       160       170       180       190     

             240       250       260       270       280       290 
pF1KB7 KARAILTGKTTDKSPFVIYDMNSLMMGEDKIKFKHITPLQEQSKEVAIRIFQGCQFRSVE
       :::.:::::..  .::::.:...: ..:  . .:...      ::.....:  ::  .::
XP_011 KARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVE
         200       210       220       230       240       250     

             300       310       320       330       340       350 
pF1KB7 AVQEITEYAKSIPGFVNLDLNDQVTLLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTRE
       .:.:.::.:::::.: .: :::::::::::::: :..::::..::::.:...:.::.:::
XP_011 TVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTRE
         260       270       280       290       300       310     

             360       370       380       390       400       410 
pF1KB7 FLKSLRKPFGDFMEPKFEFAVKFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQD
       ::.::::::.:..:::::::::::::::::::::.:::.::: ::::::.::  .: :::
XP_011 FLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQD
         320       330       340       350       360       370     

             420       430       440       450       460       470 
pF1KB7 NLLQALELQLKLNHPESSQLFAKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQE
       ..:.:::..:. :::... :: ::::::.::::.::::.:..: ::::::. ::::::::
XP_011 TILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQE
         380       390       400       410       420       430     

             
pF1KB7 IYKDLY
       ::::.:
XP_011 IYKDMY
         440 




477 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 07:38:09 2016 done: Sat Nov  5 07:38:11 2016
 Total Scan time:  8.950 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
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