FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6250, 258 aa 1>>>pF1KE6250 258 - 258 aa - 258 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1341+/-0.000712; mu= 12.8148+/- 0.043 mean_var=107.3503+/-21.634, 0's: 0 Z-trim(112.8): 51 B-trim: 0 in 0/53 Lambda= 0.123786 statistics sampled from 13481 (13532) to 13481 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.758), E-opt: 0.2 (0.416), width: 16 Scan time: 1.910 The best scores are: opt bits E(32554) CCDS1229.2 MPZ gene_id:4359|Hs108|chr1 ( 248) 1665 307.1 7.5e-84 CCDS1264.1 MPZL1 gene_id:9019|Hs108|chr1 ( 269) 427 86.0 2.9e-17 CCDS44273.1 MPZL1 gene_id:9019|Hs108|chr1 ( 209) 420 84.7 5.7e-17 CCDS8392.1 MPZL3 gene_id:196264|Hs108|chr11 ( 235) 366 75.1 4.9e-14 CCDS66241.1 MPZL3 gene_id:196264|Hs108|chr11 ( 223) 355 73.1 1.9e-13 CCDS8393.1 MPZL2 gene_id:10205|Hs108|chr11 ( 215) 349 72.0 3.8e-13 >>CCDS1229.2 MPZ gene_id:4359|Hs108|chr1 (248 aa) initn: 1665 init1: 1665 opt: 1665 Z-score: 1618.8 bits: 307.1 E(32554): 7.5e-84 Smith-Waterman score: 1665; 100.0% identity (100.0% similar) in 248 aa overlap (11-258:1-248) 10 20 30 40 50 60 pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE6 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 LLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRSTK 180 190 200 210 220 230 250 pF1KE6 AVSEKKAKGLGESRKDKK :::::::::::::::::: CCDS12 AVSEKKAKGLGESRKDKK 240 >>CCDS1264.1 MPZL1 gene_id:9019|Hs108|chr1 (269 aa) initn: 494 init1: 382 opt: 427 Z-score: 423.5 bits: 86.0 E(32554): 2.9e-17 Smith-Waterman score: 456; 36.8% identity (65.6% similar) in 250 aa overlap (2-236:1-247) 10 20 30 40 50 pF1KE6 MLRAPAPAPAMAPGAPSSSPS--PILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTL . : : : :. .::.: .::. : .:. . ..:. ::: .:. : :.. : CCDS12 MAASAGAGAVI-AAPDSRRWLWSVLAAAL--GLLTAGVSALEVYTPKEIFVANGTQGKL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 HCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWK :.: :. .. : .: .::::. ..:.:::..:: :. . ::.::.:.:: : CCDS12 TCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 DGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK--VPTR-YGVVLGAVIGGV :.:: :.:... :::. :::::::::: . ... ::: :: .:. ::.: : . : CCDS12 DASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVV 120 130 140 150 160 170 180 190 200 210 220 pF1KE6 LGVVLLLLLLFYVV-RYCWLRRQ---AALQRRLSAMEKGKLHKPG------KDASKRGRQ ::..::. ... :. : .:. . .. :: .... ..:. :. . ..: CCDS12 LGLTLLISMILAVLYRRKNSKRDYTGCSTSESLSPVKQAPRKSPSDTEGLVKSLPSGSHQ 180 190 200 210 220 230 230 240 250 pF1KE6 TPVLYAMLDHSRSTKAVSEKKAKGLGESRKDKK ::.::.:::: CCDS12 GPVIYAQLDHSGGHHSDKINKSESVVYADIRKN 240 250 260 >>CCDS44273.1 MPZL1 gene_id:9019|Hs108|chr1 (209 aa) initn: 445 init1: 382 opt: 420 Z-score: 418.2 bits: 84.7 E(32554): 5.7e-17 Smith-Waterman score: 420; 39.9% identity (67.9% similar) in 193 aa overlap (2-189:1-190) 10 20 30 40 50 pF1KE6 MLRAPAPAPAMAPGAPSSSPS--PILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTL . : : : :. .::.: .::. : .:. . ..:. ::: .:. : :.. : CCDS44 MAASAGAGAVI-AAPDSRRWLWSVLAAAL--GLLTAGVSALEVYTPKEIFVANGTQGKL 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 HCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWK :.: :. .. : .: .::::. ..:.:::..:: :. . ::.::.:.:: : CCDS44 TCKFKSTSTTGGLTSVSWSFQPEGADTTVSFFHYSQGQVYLGNYPPFKDRISWAGDLDKK 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE6 DGSIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK--VPTR-YGVVLGAVIGGV :.:: :.:... :::. :::::::::: . ... ::: :: .:. ::.: : . : CCDS44 DASINIENMQFIHNGTYICDVKNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIVTAVV 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE6 LGVVLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDH ::..::. ... :. CCDS44 LGLTLLISMILAVLYRRKNSKRDYTGAQSYMHS 180 190 200 >>CCDS8392.1 MPZL3 gene_id:196264|Hs108|chr11 (235 aa) initn: 271 init1: 179 opt: 366 Z-score: 365.4 bits: 75.1 E(32554): 4.9e-14 Smith-Waterman score: 366; 33.7% identity (67.9% similar) in 196 aa overlap (12-203:6-191) 10 20 30 40 50 60 pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC : :. . . :.:.::.:... . . .. . .: .:.: :: .. :.: CCDS83 MQQRGAAGSRGCALFPLLGVLFFQGVYI--VFSLEIRADAHVRGYVGEKIKLKC 10 20 30 40 50 70 80 90 100 110 120 pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG .: :. :.: ... : :.: .. ..::::: . : : .:::..::.:::. :. CCDS83 TFKSTSDVTDKLTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDA 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVL :: : : .:::::.: ::::::. . .. : : :. .:..:..: ..:.... CCDS83 SISISNPTIKDNGTFSCAVKNPPDVHHNIPMTELTVTER---GFGTMLSSV--ALLSILV 120 130 140 150 160 190 200 210 220 230 pF1KE6 LL----LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHS .. .. . .::. :. :.:..: CCDS83 FVPSAVVVALLLVRMG--RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCA 170 180 190 200 210 220 >>CCDS66241.1 MPZL3 gene_id:196264|Hs108|chr11 (223 aa) initn: 271 init1: 179 opt: 355 Z-score: 355.1 bits: 73.1 E(32554): 1.9e-13 Smith-Waterman score: 355; 35.1% identity (67.2% similar) in 174 aa overlap (34-203:14-179) 10 20 30 40 50 60 pF1KE6 APAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHCSFW : : ... . : .:.: :: .. :.:.: CCDS66 MQQRGAAGSRGCALFPLLGVLFFQDAHVRGYVGEKIKLKCTFK 10 20 30 40 70 80 90 100 110 120 pF1KE6 SSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGSIV :. :.: ... : :.: .. ..::::: . : : .:::..::.:::. :.:: CCDS66 STSDVTDKLTIDWTYRPPSSSHTVSIFHYQSFQ-YPTTAGTFRDRISWVGNVYKGDASIS 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE6 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVVLGAVIGGVLGVVLLL- : : .:::::.: ::::::. . .. : : :. .:..:..: ..:...... CCDS66 ISNPTIKDNGTFSCAVKNPPDVHHNIPMTELTVTER---GFGTMLSSV--ALLSILVFVP 110 120 130 140 150 190 200 210 220 230 pF1KE6 ---LLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRST .. . .::. :. :.:..: CCDS66 SAVVVALLLVRMG--RKAAGLKKRSRSGYKKSSIEVSDDTDQEEEEACMARLCVRCAECL 160 170 180 190 200 210 >>CCDS8393.1 MPZL2 gene_id:10205|Hs108|chr11 (215 aa) initn: 229 init1: 203 opt: 349 Z-score: 349.5 bits: 72.0 E(32554): 3.8e-13 Smith-Waterman score: 349; 31.6% identity (65.8% similar) in 193 aa overlap (18-208:5-192) 10 20 30 40 50 60 pF1KE6 MLRAPAPAPAMAPGAPSSSPSPILAVLLFSSLVLSPAQAIVVYTDREVHGAVGSRVTLHC :: .: .: .. .: : :. .::.: .... :. . :.: CCDS83 MYGKSSTRAVLLLLGIQLTALWPIAAVEIYTSRVLEAVNGTDARLKC 10 20 30 40 70 80 90 100 110 120 pF1KE6 SFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDG .: : :.: .. :: ..: : .:.: . .:. : ::.:..: :.:. :. CCDS83 TFSSFAPVGDALTVTWNFRPLDGGPEQFVFYY-HIDPFQPMSGRFKDRVSWDGNPERYDA 50 60 70 80 90 100 130 140 150 160 170 pF1KE6 SIVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPTRYGVV--LGAVIGGVLGV ::.. .:...::::.::.::::::. : ... : : . : :.. . :. .::.. CCDS83 SILLWKLQFDDNGTYTCQVKNPPDVDGVIGEIRLSVVHTV--RFSEIHFLALAIGSA--C 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE6 VLLLLLLFYVVRYCWLRRQAALQRRLSAMEKGKLHKPGKDASKRGRQTPVLYAMLDHSRS .:...... :: . :.. .: ...: CCDS83 ALMIIIVIVVVLFQHYRKKRWAERAHKVVEIKSKEEERLNQEKKVSVYLEDTD 170 180 190 200 210 258 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 11:27:52 2016 done: Tue Nov 8 11:27:52 2016 Total Scan time: 1.910 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]