FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1483, 451 aa 1>>>pF1KE1483 451 - 451 aa - 451 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8462+/-0.000391; mu= 19.8219+/- 0.024 mean_var=60.3718+/-12.066, 0's: 0 Z-trim(111.4): 67 B-trim: 926 in 1/49 Lambda= 0.165066 statistics sampled from 19961 (20028) to 19961 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.235), width: 16 Scan time: 8.680 The best scores are: opt bits E(85289) NP_001257328 (OMIM: 602529,611603) tubulin alpha-1 ( 451) 3047 734.4 1.5e-211 NP_006000 (OMIM: 602529,611603) tubulin alpha-1A c ( 451) 3047 734.4 1.5e-211 NP_006073 (OMIM: 602530) tubulin alpha-1B chain [H ( 451) 3036 731.8 9e-211 NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain ( 450) 2986 719.9 3.4e-207 NP_005991 (OMIM: 191110,616208) tubulin alpha-4A c ( 448) 2933 707.2 2.2e-203 NP_001265481 (OMIM: 191110,616208) tubulin alpha-4 ( 433) 2831 682.9 4.3e-196 NP_001257329 (OMIM: 602529,611603) tubulin alpha-1 ( 416) 2785 672.0 8.3e-193 NP_061816 (OMIM: 605742,613180) tubulin alpha-8 ch ( 449) 2772 668.9 7.5e-192 NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 ( 383) 2412 583.1 4.3e-166 XP_016860313 (OMIM: 191110,616208) PREDICTED: tubu ( 295) 1925 467.1 2.8e-131 NP_006078 (OMIM: 602662) tubulin beta-4A chain iso ( 444) 1282 314.1 4.9e-85 NP_001276058 (OMIM: 602662) tubulin beta-4A chain ( 444) 1282 314.1 4.9e-85 NP_001276056 (OMIM: 602662) tubulin beta-4A chain ( 489) 1282 314.1 5.3e-85 NP_001276052 (OMIM: 602662) tubulin beta-4A chain ( 495) 1282 314.1 5.3e-85 NP_821133 (OMIM: 156610,191130,615771) tubulin bet ( 444) 1280 313.6 6.8e-85 NP_006079 (OMIM: 602660) tubulin beta-4B chain [Ho ( 445) 1280 313.6 6.8e-85 NP_001060 (OMIM: 615101,615763) tubulin beta-2A ch ( 445) 1269 311.0 4.2e-84 NP_821080 (OMIM: 610031,612850) tubulin beta-2B ch ( 445) 1267 310.5 5.8e-84 NP_001290453 (OMIM: 615103) tubulin beta-6 chain i ( 446) 1266 310.3 6.8e-84 NP_115914 (OMIM: 615103) tubulin beta-6 chain isof ( 446) 1266 310.3 6.8e-84 NP_006077 (OMIM: 600638,602661,614039) tubulin bet ( 450) 1265 310.0 8.1e-84 NP_817124 (OMIM: 616768,616780) tubulin beta-8 cha ( 444) 1237 303.4 8.2e-82 NP_001280141 (OMIM: 156610,191130,615771) tubulin ( 464) 1218 298.8 1.9e-80 NP_110400 (OMIM: 612901,613112) tubulin beta-1 cha ( 451) 1190 292.2 1.9e-78 NP_001280143 (OMIM: 156610,191130,615771) tubulin ( 400) 1149 282.4 1.5e-75 XP_016883574 (OMIM: 612901,613112) PREDICTED: tubu ( 429) 1107 272.4 1.7e-72 NP_001276059 (OMIM: 602662) tubulin beta-4A chain ( 372) 1079 265.7 1.5e-70 NP_001276060 (OMIM: 602662) tubulin beta-4A chain ( 372) 1079 265.7 1.5e-70 NP_001280145 (OMIM: 156610,191130,615771) tubulin ( 372) 1069 263.3 7.8e-70 NP_001280144 (OMIM: 156610,191130,615771) tubulin ( 372) 1069 263.3 7.8e-70 NP_001184110 (OMIM: 600638,602661,614039) tubulin ( 378) 1066 262.6 1.3e-69 NP_001290456 (OMIM: 615103) tubulin beta-6 chain i ( 374) 1065 262.3 1.5e-69 XP_011517761 (OMIM: 616768,616780) PREDICTED: tubu ( 372) 1051 259.0 1.5e-68 NP_001290457 (OMIM: 615103) tubulin beta-6 chain i ( 381) 1003 247.6 4.3e-65 NP_001297244 (OMIM: 615101,615763) tubulin beta-2A ( 360) 1002 247.3 4.9e-65 NP_001290455 (OMIM: 615103) tubulin beta-6 chain i ( 409) 990 244.5 3.9e-64 XP_016871682 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 911 225.6 1.5e-58 XP_016871681 (OMIM: 616768,616780) PREDICTED: tubu ( 332) 911 225.6 1.5e-58 NP_001061 (OMIM: 191135,615412) tubulin gamma-1 ch ( 451) 817 203.3 1.1e-51 NP_057521 (OMIM: 605785) tubulin gamma-2 chain iso ( 451) 810 201.7 3.4e-51 NP_001290459 (OMIM: 615103) tubulin beta-6 chain i ( 300) 780 194.4 3.4e-49 NP_001290458 (OMIM: 615103) tubulin beta-6 chain i ( 300) 780 194.4 3.4e-49 XP_011517762 (OMIM: 616768,616780) PREDICTED: tubu ( 291) 731 182.7 1.1e-45 NP_001307438 (OMIM: 605785) tubulin gamma-2 chain ( 460) 542 137.9 5.6e-32 NP_057346 (OMIM: 607345) tubulin epsilon chain [Ho ( 475) 443 114.3 7.2e-25 XP_011522916 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 435 112.3 1.9e-24 XP_016879942 (OMIM: 605785) PREDICTED: tubulin gam ( 298) 435 112.3 1.9e-24 XP_016879944 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 409 106.0 1.3e-22 XP_016879946 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 409 106.0 1.3e-22 XP_016879943 (OMIM: 605785) PREDICTED: tubulin gam ( 274) 409 106.0 1.3e-22 >>NP_001257328 (OMIM: 602529,611603) tubulin alpha-1A ch (451 aa) initn: 3047 init1: 3047 opt: 3047 Z-score: 3919.2 bits: 734.4 E(85289): 1.5e-211 Smith-Waterman score: 3047; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::::::::::::::::::::::::::::: NP_001 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_006000 (OMIM: 602529,611603) tubulin alpha-1A chain (451 aa) initn: 3047 init1: 3047 opt: 3047 Z-score: 3919.2 bits: 734.4 E(85289): 1.5e-211 Smith-Waterman score: 3047; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::::::::::::::::::::::::::::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_006073 (OMIM: 602530) tubulin alpha-1B chain [Homo (451 aa) initn: 3036 init1: 3036 opt: 3036 Z-score: 3905.0 bits: 731.8 E(85289): 9e-211 Smith-Waterman score: 3036; 99.6% identity (100.0% similar) in 451 aa overlap (1-451:1-451) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_006 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: NP_006 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_006 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::::::::::::::::::::::::::::: NP_006 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY 430 440 450 >>NP_005992 (OMIM: 602528) tubulin alpha-3C/D chain [Hom (450 aa) initn: 2970 init1: 2970 opt: 2986 Z-score: 3840.7 bits: 719.9 E(85289): 3.4e-207 Smith-Waterman score: 2986; 97.6% identity (99.6% similar) in 451 aa overlap (1-451:1-450) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD ::::::::::::::.:::::::::::::::::::::::::::::::::::::::.::::: NP_005 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA ::::::: ::::::::.::::::::::::.:::::::::::::::::::.:::::::::: NP_005 RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::.::::::::::::::::.:.:: :::: NP_005 AREDLAALEKDYEEVGVDSVEAEAEE-GEEY 430 440 450 >>NP_005991 (OMIM: 191110,616208) tubulin alpha-4A chain (448 aa) initn: 2927 init1: 2927 opt: 2933 Z-score: 3772.5 bits: 707.2 E(85289): 2.2e-203 Smith-Waterman score: 2933; 96.0% identity (98.4% similar) in 450 aa overlap (1-450:1-448) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK ::::::.::::::::.:::::::::::::::::::::::::::::::::.::: :::::: NP_005 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD :::::::::::::::::.:.: :::::::::::::::::::::::::::::::::: ::: NP_005 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_005 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::.:::::.:::::::::::::::::::: NP_005 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::::::::::::::.:: : :.:::: NP_005 AREDMAALEKDYEEVGIDSYED--EDEGEE 430 440 >>NP_001265481 (OMIM: 191110,616208) tubulin alpha-4A ch (433 aa) initn: 2823 init1: 2823 opt: 2831 Z-score: 3641.5 bits: 682.9 E(85289): 4.3e-196 Smith-Waterman score: 2831; 96.1% identity (98.4% similar) in 435 aa overlap (16-450:1-433) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK .:::::::::::::::::::::::::::::::::.::: :::::: NP_001 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK 10 20 30 40 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD :::::::::::::::::.:.: :::::::::::::::::::::::::::::::::: ::: NP_001 HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD 50 60 70 80 90 100 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_001 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP :::::::::::::::::::::::::::::::::.:::::.:::::::::::::::::::: NP_001 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 350 360 370 380 390 400 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::::::::::::::.:: : : .:::: NP_001 AREDMAALEKDYEEVGIDSYEDE--DEGEE 410 420 430 >>NP_001257329 (OMIM: 602529,611603) tubulin alpha-1A ch (416 aa) initn: 2785 init1: 2785 opt: 2785 Z-score: 3582.5 bits: 672.0 E(85289): 8.3e-193 Smith-Waterman score: 2785; 100.0% identity (100.0% similar) in 416 aa overlap (36-451:1-416) 10 20 30 40 50 60 pF1KE1 SIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRA :::::::::::::::::::::::::::::: NP_001 MPSDKTIGGGDDSFNTFFSETGAGKHVPRA 10 20 30 70 80 90 100 110 120 pF1KE1 VFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKL 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE1 ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 ADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPY 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE1 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE1 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKC 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE1 DPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 DPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 280 290 300 310 320 330 370 380 390 400 410 420 pF1KE1 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 340 350 360 370 380 390 430 440 450 pF1KE1 AALEKDYEEVGVDSVEGEGEEEGEEY :::::::::::::::::::::::::: NP_001 AALEKDYEEVGVDSVEGEGEEEGEEY 400 410 >>NP_061816 (OMIM: 605742,613180) tubulin alpha-8 chain (449 aa) initn: 2765 init1: 2765 opt: 2772 Z-score: 3565.3 bits: 668.9 E(85289): 7.5e-192 Smith-Waterman score: 2772; 89.8% identity (96.7% similar) in 451 aa overlap (1-451:1-449) 10 20 30 40 50 60 pF1KE1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK ::::::.::::::::::::::::.::::::: :: . .. . . ::::.::::::: :: NP_061 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFDAQASKINDDDSFTTFFSETGNGK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD ::::::..::::::.::::.:::::::::::::::::::::::::::::.::: :::::: NP_061 HVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA :::::.: :.::::::.:::::::::::::::::::::.::::::::::.:::::::::: NP_061 RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: NP_061 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN :::::::::::::::::::::::::::::.::::.:::::::::::::::::..:::: . NP_061 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE1 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP ::::::::::::::::.::::::::::::.:::.:::::::::::::::::::::::::: NP_061 QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE1 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 370 380 390 400 410 420 430 440 450 pF1KE1 AREDMAALEKDYEEVGVDSVEGEGEEEGEEY ::::.:::::::::::.:: : :.: :::. NP_061 AREDLAALEKDYEEVGTDSFEEENE--GEEF 430 440 >>NP_001180343 (OMIM: 605742,613180) tubulin alpha-8 cha (383 aa) initn: 2401 init1: 2401 opt: 2412 Z-score: 3103.0 bits: 583.1 E(85289): 4.3e-166 Smith-Waterman score: 2412; 92.4% identity (98.2% similar) in 384 aa overlap (68-451:2-383) 40 50 60 70 80 90 pF1KE1 SDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKE .::::::.::::.::::::::::::::::: NP_001 MIDLEPTVVDEVRAGTYRQLFHPEQLITGKE 10 20 30 100 110 120 130 140 150 pF1KE1 DAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERL ::::::::::::.::: :::::::::::.: :.::::::.:::::::::::::::::::: NP_001 DAANNYARGHYTVGKESIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERL 40 50 60 70 80 90 160 170 180 190 200 210 pF1KE1 SVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL :.::::::::::.::::::::::::::::::::::::::::::::::::::::::::::: NP_001 SLDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL 100 110 120 130 140 150 220 230 240 250 260 270 pF1KE1 DIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVIS ::::::::::::::.:::::::::::::::::::::::::::::::::::::.::::.:: NP_001 DIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIIS 160 170 180 190 200 210 280 290 300 310 320 330 pF1KE1 AEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKT :::::::::::::::..:::: .::::::::::::::::.::::::::::::.:::.::: NP_001 AEKAYHEQLSVAEITSSCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKT 220 230 240 250 260 270 340 350 360 370 380 390 pF1KE1 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDL 280 290 300 310 320 330 400 410 420 430 440 450 pF1KE1 MYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY :::::::::::::::::::::::::::.:::::::::::.:: : :.: :::. NP_001 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENE--GEEF 340 350 360 370 380 >>XP_016860313 (OMIM: 191110,616208) PREDICTED: tubulin (295 aa) initn: 1919 init1: 1919 opt: 1925 Z-score: 2477.8 bits: 467.1 E(85289): 2.8e-131 Smith-Waterman score: 1925; 97.0% identity (98.7% similar) in 297 aa overlap (154-450:1-295) 130 140 150 160 170 180 pF1KE1 KLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVE :::::::::::::::::::::::::::::: XP_016 MERLSVDYGKKSKLEFSIYPAPQVSTAVVE 10 20 30 190 200 210 220 230 240 pF1KE1 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLR ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: XP_016 PYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLR 40 50 60 70 80 90 250 260 270 280 290 300 pF1KE1 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 FDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMV 100 110 120 130 140 150 310 320 330 340 350 360 pF1KE1 KCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV ::::::::::::::::::::::::::::::.:::::.::::::::::::::::::::::: XP_016 KCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVV 160 170 180 190 200 210 370 380 390 400 410 420 pF1KE1 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARE 220 230 240 250 260 270 430 440 450 pF1KE1 DMAALEKDYEEVGVDSVEGEGEEEGEEY :::::::::::::.:: : : .:::: XP_016 DMAALEKDYEEVGIDSYEDE--DEGEE 280 290 451 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 02:15:38 2016 done: Mon Nov 7 02:15:39 2016 Total Scan time: 8.680 Total Display time: 0.070 Function used was FASTA [36.3.4 Apr, 2011]