FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6433, 447 aa 1>>>pF1KE6433 447 - 447 aa - 447 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.1558+/-0.000751; mu= 18.4606+/- 0.046 mean_var=65.0535+/-13.201, 0's: 0 Z-trim(108.7): 6 B-trim: 357 in 1/49 Lambda= 0.159015 statistics sampled from 10403 (10407) to 10403 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.32), width: 16 Scan time: 3.090 The best scores are: opt bits E(32554) CCDS9690.1 MGAT2 gene_id:4247|Hs108|chr14 ( 447) 3120 724.4 5.6e-209 >>CCDS9690.1 MGAT2 gene_id:4247|Hs108|chr14 (447 aa) initn: 3120 init1: 3120 opt: 3120 Z-score: 3865.3 bits: 724.4 E(32554): 5.6e-209 Smith-Waterman score: 3120; 100.0% identity (100.0% similar) in 447 aa overlap (1-447:1-447) 10 20 30 40 50 60 pF1KE6 MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 MRFRIYKRKVLILTLVVAACGFVLWSSNGRQRKNEALAPPLLDAEPARGAGGRGGDHPSV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 AVGIRRVSNVSAASLVPAVPQPEADNLTLRYRSLVYQLNFDQTLRNVDKAGTWAPRELVL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 VVQVHNRPEYLRLLLDSLRKAQGIDNVLVIFSHDFWSTEINQLIAGVNFCPVLQVFFPFS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 IQLYPNEFPGSDPRDCPRDLPKNAALKLGCINAEYPDSFGHYREAKFSQTKHHWWWKLHF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 VWERVKILRDYAGLILFLEEDHYLAPDFYHVFKKMWKLKQQECPECDVLSLGTYSASRSF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE6 YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 YGMADKVDVKTWKSTEHNMGLALTRNAYQKLIECTDTFCTYDDYNWDWTLQYLTVSCLPK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE6 FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS96 FWKVLVPQIPRIFHAGDCGMHHKKTCRPSTQSAQIESLLNNNKQYMFPETLTISEKFTVV 370 380 390 400 410 420 430 440 pF1KE6 AISPPRKNGGWGDIRDHELCKSYRRLQ ::::::::::::::::::::::::::: CCDS96 AISPPRKNGGWGDIRDHELCKSYRRLQ 430 440 447 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 13:15:30 2016 done: Tue Nov 8 13:15:31 2016 Total Scan time: 3.090 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]